RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 TRIM44Q96DX7 344 aaPredicted RBP19.46■□□□□ 0.71
LIMK2-203ENST00000340552 PLEKHH1Q9ULM0 1364 aa19.46■□□□□ 0.71
LIMK2-203ENST00000340552 PTPRMP28827 1452 aa19.46■□□□□ 0.71
LIMK2-203ENST00000340552 PUS7Q96PZ0 661 aaKnown RBP19.45■□□□□ 0.7
LIMK2-203ENST00000340552 TBC1D32Q96NH3 1257 aa19.44■□□□□ 0.7
LIMK2-203ENST00000340552 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.44■□□□□ 0.7
LIMK2-203ENST00000340552 PRAM1Q96QH2 718 aa19.44■□□□□ 0.7
LIMK2-203ENST00000340552 MAPK8IP3Q9UPT6 1336 aa19.42■□□□□ 0.7
LIMK2-203ENST00000340552 RIPK4P57078 832 aa19.42■□□□□ 0.7
LIMK2-203ENST00000340552 CABP2Q9NPB3 220 aa19.42■□□□□ 0.7
LIMK2-203ENST00000340552 SETD1AO15047 1707 aaKnown RBP19.41■□□□□ 0.7
LIMK2-203ENST00000340552 NSD3Q9BZ95 1437 aa19.41■□□□□ 0.7
LIMK2-203ENST00000340552 ADAMTS8Q9UP79 889 aa19.41■□□□□ 0.7
LIMK2-203ENST00000340552 CEBPAP49715 358 aaPredicted RBP19.4■□□□□ 0.7
LIMK2-203ENST00000340552 MINK1Q8N4C8 1332 aaPredicted RBP19.4■□□□□ 0.7
LIMK2-203ENST00000340552 FGD1P98174 961 aa19.4■□□□□ 0.7
LIMK2-203ENST00000340552 UBR1Q8IWV7 1749 aa19.39■□□□□ 0.7
LIMK2-203ENST00000340552 HDGFP51858 240 aaKnown RBP19.39■□□□□ 0.7
LIMK2-203ENST00000340552 GAS2L3Q86XJ1 694 aa19.39■□□□□ 0.69
LIMK2-203ENST00000340552 ISY1Q9ULR0 285 aaKnown RBP19.39■□□□□ 0.69
LIMK2-203ENST00000340552 ZNF521Q96K83 1311 aa19.39■□□□□ 0.69
LIMK2-203ENST00000340552 SRPK2P78362 688 aaKnown RBP19.38■□□□□ 0.69
LIMK2-203ENST00000340552 CHMP5Q9NZZ3 219 aa19.38■□□□□ 0.69
LIMK2-203ENST00000340552 NRXN3Q9Y4C0 1643 aa19.38■□□□□ 0.69
LIMK2-203ENST00000340552 UPF2Q9HAU5 1272 aaKnown RBP19.38■□□□□ 0.69
LIMK2-203ENST00000340552 GOLGA2Q08379 1002 aa19.37■□□□□ 0.69
LIMK2-203ENST00000340552 TMEM2Q9UHN6 1383 aa19.37■□□□□ 0.69
LIMK2-203ENST00000340552 FER1L4A9Z1Z3 1794 aa19.36■□□□□ 0.69
LIMK2-203ENST00000340552 BCAR3O75815 825 aa19.36■□□□□ 0.69
LIMK2-203ENST00000340552 DLC1Q96QB1 1528 aa19.36■□□□□ 0.69
LIMK2-203ENST00000340552 ANKRD36BQ8N2N9 1353 aa19.36■□□□□ 0.69
LIMK2-203ENST00000340552 C3P01024 1663 aa19.35■□□□□ 0.69
LIMK2-203ENST00000340552 OFD1O75665 1012 aa19.35■□□□□ 0.69
LIMK2-203ENST00000340552 WDR43Q15061 677 aaKnown RBP eCLIP19.34■□□□□ 0.69
LIMK2-203ENST00000340552 PLPPR3Q6T4P5 718 aa19.34■□□□□ 0.69
LIMK2-203ENST00000340552 ABCC11Q96J66 1382 aa19.34■□□□□ 0.69
LIMK2-203ENST00000340552 DDX11L8A8MPP1 907 aa19.33■□□□□ 0.69
LIMK2-203ENST00000340552 SLFN5Q08AF3 891 aa19.33■□□□□ 0.69
LIMK2-203ENST00000340552 METP08581 1390 aa19.33■□□□□ 0.69
LIMK2-203ENST00000340552 ATAD2Q6PL18 1390 aa19.33■□□□□ 0.69
LIMK2-203ENST00000340552 USP32Q8NFA0 1604 aa19.33■□□□□ 0.68
LIMK2-203ENST00000340552 NINLQ9Y2I6 1382 aa19.33■□□□□ 0.68
LIMK2-203ENST00000340552 CGNL1Q0VF96 1302 aa19.33■□□□□ 0.68
LIMK2-203ENST00000340552 WAPLQ7Z5K2 1190 aa19.33■□□□□ 0.68
LIMK2-203ENST00000340552 FAM13BQ9NYF5 915 aa19.33■□□□□ 0.68
LIMK2-203ENST00000340552 MORC1Q86VD1 984 aa19.32■□□□□ 0.68
LIMK2-203ENST00000340552 CDK19Q9BWU1 502 aa19.31■□□□□ 0.68
LIMK2-203ENST00000340552 ZNF692Q9BU19 519 aaPredicted RBP19.3■□□□□ 0.68
LIMK2-203ENST00000340552 ZSCAN30Q86W11 494 aa19.3■□□□□ 0.68
LIMK2-203ENST00000340552 CLUAP1Q96AJ1 413 aa19.3■□□□□ 0.68
LIMK2-203ENST00000340552 MAP7D2Q96T17 732 aa19.3■□□□□ 0.68
LIMK2-203ENST00000340552 SPINK5Q9NQ38 1064 aaPredicted RBP19.3■□□□□ 0.68
LIMK2-203ENST00000340552 A0A1W2PP64 1363 aa19.3■□□□□ 0.68
LIMK2-203ENST00000340552 TERF1P54274 439 aa19.29■□□□□ 0.68
LIMK2-203ENST00000340552 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.29■□□□□ 0.68
LIMK2-203ENST00000340552 SMAP1Q8IYB5 467 aaPredicted RBP19.29■□□□□ 0.68
LIMK2-203ENST00000340552 TRMT2AQ8IZ69 625 aaKnown RBP19.29■□□□□ 0.68
LIMK2-203ENST00000340552 LTKP29376 864 aa19.28■□□□□ 0.68
LIMK2-203ENST00000340552 NKTRP30414 1462 aaKnown RBP19.28■□□□□ 0.68
LIMK2-203ENST00000340552 TNNT2P45379 298 aaPredicted RBP19.27■□□□□ 0.68
LIMK2-203ENST00000340552 TXNDC2Q86VQ3 553 aa19.27■□□□□ 0.68
LIMK2-203ENST00000340552 CCDC173Q0VFZ6 552 aa19.27■□□□□ 0.67
LIMK2-203ENST00000340552 PPP1R9BQ96SB3 815 aa19.27■□□□□ 0.67
LIMK2-203ENST00000340552 TERF2IPQ9NYB0 399 aa19.27■□□□□ 0.67
LIMK2-203ENST00000340552 NSD2O96028 1365 aa19.26■□□□□ 0.67
LIMK2-203ENST00000340552 ZHX1Q9UKY1 873 aaPredicted RBP19.26■□□□□ 0.67
LIMK2-203ENST00000340552 COG6Q9Y2V7 657 aa19.26■□□□□ 0.67
LIMK2-203ENST00000340552 R3HCC1Q9Y3T6 440 aaKnown RBP19.26■□□□□ 0.67
LIMK2-203ENST00000340552 KNDC1Q76NI1 1749 aa19.26■□□□□ 0.67
LIMK2-203ENST00000340552 ADAMTS13Q76LX8 1427 aa19.25■□□□□ 0.67
LIMK2-203ENST00000340552 PLEKHG1Q9ULL1 1385 aa19.25■□□□□ 0.67
LIMK2-203ENST00000340552 PANK1Q8TE04 598 aa19.25■□□□□ 0.67
LIMK2-203ENST00000340552 ARID3AQ99856 593 aa19.25■□□□□ 0.67
LIMK2-203ENST00000340552 POLR3AO14802 1390 aaPredicted RBP19.24■□□□□ 0.67
LIMK2-203ENST00000340552 TECPR2O15040 1411 aa19.24■□□□□ 0.67
LIMK2-203ENST00000340552 CD163L1Q9NR16 1453 aa19.24■□□□□ 0.67
LIMK2-203ENST00000340552 EID1Q9Y6B2 187 aa19.24■□□□□ 0.67
LIMK2-203ENST00000340552 CABP1Q9NZU7 370 aa19.23■□□□□ 0.67
LIMK2-203ENST00000340552 FAM135BQ49AJ0 1406 aa19.23■□□□□ 0.67
LIMK2-203ENST00000340552 MSNP26038 577 aaKnown RBP19.23■□□□□ 0.67
LIMK2-203ENST00000340552 SIRT1Q96EB6 747 aa19.23■□□□□ 0.67
LIMK2-203ENST00000340552 DNAJC5Q9H3Z4 198 aa19.23■□□□□ 0.67
LIMK2-203ENST00000340552 PRDM10Q9NQV6 1147 aa19.23■□□□□ 0.67
LIMK2-203ENST00000340552 PDE3AQ14432 1141 aa19.22■□□□□ 0.67
LIMK2-203ENST00000340552 HDGFL2Q7Z4V5 671 aaPredicted RBP19.22■□□□□ 0.67
LIMK2-203ENST00000340552 C22orf23Q9BZE7 217 aa19.22■□□□□ 0.67
LIMK2-203ENST00000340552 DDIT3P35638 169 aa19.22■□□□□ 0.67
LIMK2-203ENST00000340552 PDZRN3Q9UPQ7 1066 aa19.22■□□□□ 0.67
LIMK2-203ENST00000340552 SLIT1O75093 1534 aa19.21■□□□□ 0.67
LIMK2-203ENST00000340552 CPS1P31327 1500 aa19.21■□□□□ 0.67
LIMK2-203ENST00000340552 TNPO1Q92973 898 aaKnown RBP19.21■□□□□ 0.67
LIMK2-203ENST00000340552 NCOA3Q9Y6Q9 1424 aa19.21■□□□□ 0.67
LIMK2-203ENST00000340552 ARHGAP23Q9P227 1491 aa19.21■□□□□ 0.67
LIMK2-203ENST00000340552 WASLO00401 505 aaPredicted RBP19.21■□□□□ 0.67
LIMK2-203ENST00000340552 NASPP49321 788 aaPredicted RBP19.21■□□□□ 0.67
LIMK2-203ENST00000340552 THEMISQ8N1K5 641 aaPredicted RBP19.2■□□□□ 0.66
LIMK2-203ENST00000340552 UQCRHLA0A096LP55 91 aa19.2■□□□□ 0.66
LIMK2-203ENST00000340552 UQCRHP07919 91 aa19.2■□□□□ 0.66
LIMK2-203ENST00000340552 MTHFSP49914 203 aa19.19■□□□□ 0.66
LIMK2-203ENST00000340552 CCDC146Q8IYE0 955 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms