RNA–Protein interactions for RNA: ENST00000315127.8

EDC3-201, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-201ENST00000315127 NEO1Q92859 1461 aa17.76■□□□□ 0.43
EDC3-201ENST00000315127 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
EDC3-201ENST00000315127 FANCIQ9NVI1 1328 aa17.75■□□□□ 0.43
EDC3-201ENST00000315127 GNAI1P63096 354 aa17.75■□□□□ 0.43
EDC3-201ENST00000315127 PTPRTO14522 1441 aa17.75■□□□□ 0.43
EDC3-201ENST00000315127 MLH3Q9UHC1 1453 aa17.75■□□□□ 0.43
EDC3-201ENST00000315127 TAOK2Q9UL54 1235 aa17.75■□□□□ 0.43
EDC3-201ENST00000315127 CROCC2H7BZ55 1655 aa17.74■□□□□ 0.43
EDC3-201ENST00000315127 PPIP5K1Q6PFW1 1433 aa17.74■□□□□ 0.43
EDC3-201ENST00000315127 DDX17Q92841 729 aaKnown RBP17.74■□□□□ 0.43
EDC3-201ENST00000315127 SHROOM2Q13796 1616 aa17.74■□□□□ 0.43
EDC3-201ENST00000315127 FCHSD2O94868 740 aa17.74■□□□□ 0.43
EDC3-201ENST00000315127 AIMP1Q12904 312 aaKnown RBP17.74■□□□□ 0.43
EDC3-201ENST00000315127 LRPPRCP42704 1394 aaKnown RBP17.73■□□□□ 0.43
EDC3-201ENST00000315127 IPO9Q96P70 1041 aaKnown RBP17.73■□□□□ 0.43
EDC3-201ENST00000315127 RLBP1P12271 317 aa17.73■□□□□ 0.43
EDC3-201ENST00000315127 TMEM57Q8N5G2 664 aa17.73■□□□□ 0.43
EDC3-201ENST00000315127 CLTCL1P53675 1640 aa17.72■□□□□ 0.43
EDC3-201ENST00000315127 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
EDC3-201ENST00000315127 NFE2L2Q16236 605 aa17.72■□□□□ 0.43
EDC3-201ENST00000315127 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
EDC3-201ENST00000315127 ERVK-7P63135 1459 aa17.72■□□□□ 0.43
EDC3-201ENST00000315127 SLC4A2P04920 1241 aa17.71■□□□□ 0.43
EDC3-201ENST00000315127 WDR63Q8IWG1 891 aa17.71■□□□□ 0.43
EDC3-201ENST00000315127 PPP6R1Q9UPN7 881 aa17.71■□□□□ 0.43
EDC3-201ENST00000315127 STRN4Q9NRL3 753 aa17.71■□□□□ 0.43
EDC3-201ENST00000315127 TTC21BQ7Z4L5 1316 aa17.71■□□□□ 0.43
EDC3-201ENST00000315127 TSPYL6Q8N831 410 aa17.71■□□□□ 0.43
EDC3-201ENST00000315127 TRPM2O94759 1503 aa17.71■□□□□ 0.42
EDC3-201ENST00000315127 IGHDP01880 384 aa17.7■□□□□ 0.42
EDC3-201ENST00000315127 C1orf141Q5JVX7 400 aa17.7■□□□□ 0.42
EDC3-201ENST00000315127 PDZRN3Q9UPQ7 1066 aa17.7■□□□□ 0.42
EDC3-201ENST00000315127 DDX19BQ9UMR2 479 aa17.7■□□□□ 0.42
EDC3-201ENST00000315127 ATF7IPQ6VMQ6 1270 aa17.69■□□□□ 0.42
EDC3-201ENST00000315127 EIF2AK4Q9P2K8 1649 aaKnown RBP17.69■□□□□ 0.42
EDC3-201ENST00000315127 F6X3S4 739 aa17.69■□□□□ 0.42
EDC3-201ENST00000315127 CHRNA2Q15822 529 aa17.69■□□□□ 0.42
EDC3-201ENST00000315127 FAM161AQ3B820 660 aa17.69■□□□□ 0.42
EDC3-201ENST00000315127 DDRGK1Q96HY6 314 aa17.69■□□□□ 0.42
EDC3-201ENST00000315127 ORAI2Q96SN7 254 aa17.68■□□□□ 0.42
EDC3-201ENST00000315127 MSH5O43196 834 aa17.68■□□□□ 0.42
EDC3-201ENST00000315127 SYTL4Q96C24 671 aaPredicted RBP17.68■□□□□ 0.42
EDC3-201ENST00000315127 ANXA1P04083 346 aa17.67■□□□□ 0.42
EDC3-201ENST00000315127 TRIM27P14373 513 aa17.67■□□□□ 0.42
EDC3-201ENST00000315127 NOL8Q76FK4 1167 aaKnown RBP17.67■□□□□ 0.42
EDC3-201ENST00000315127 KAT6BQ8WYB5 2073 aa17.67■□□□□ 0.42
EDC3-201ENST00000315127 CHMP3Q9Y3E7 222 aa17.67■□□□□ 0.42
EDC3-201ENST00000315127 PLXNC1O60486 1568 aa17.67■□□□□ 0.42
EDC3-201ENST00000315127 EIF4A2Q14240 407 aaKnown RBP17.67■□□□□ 0.42
EDC3-201ENST00000315127 IQGAP3Q86VI3 1631 aa17.67■□□□□ 0.42
EDC3-201ENST00000315127 LRRC59Q96AG4 307 aaKnown RBP17.66■□□□□ 0.42
EDC3-201ENST00000315127 EVA1CP58658 441 aa17.66■□□□□ 0.42
EDC3-201ENST00000315127 BECN1Q14457 450 aa17.66■□□□□ 0.42
EDC3-201ENST00000315127 E9PCH4 1651 aa17.66■□□□□ 0.42
EDC3-201ENST00000315127 HECW2Q9P2P5 1572 aa17.65■□□□□ 0.42
EDC3-201ENST00000315127 ABCC3O15438 1527 aa17.65■□□□□ 0.42
EDC3-201ENST00000315127 MPRIPQ6WCQ1 1025 aa17.65■□□□□ 0.42
EDC3-201ENST00000315127 PDE3AQ14432 1141 aa17.65■□□□□ 0.42
EDC3-201ENST00000315127 ZNF530Q6P9A1 599 aaPredicted RBP17.65■□□□□ 0.42
EDC3-201ENST00000315127 MBIPQ9NS73 344 aa17.65■□□□□ 0.42
EDC3-201ENST00000315127 PCDHB15Q9Y5E8 787 aa17.65■□□□□ 0.42
EDC3-201ENST00000315127 TRIM6-TRIM34B2RNG4 842 aa17.64■□□□□ 0.42
EDC3-201ENST00000315127 RAPGEF4Q8WZA2 1011 aa17.64■□□□□ 0.42
EDC3-201ENST00000315127 MVPQ14764 893 aaKnown RBP17.64■□□□□ 0.41
EDC3-201ENST00000315127 KIF16BQ96L93 1317 aa17.64■□□□□ 0.41
EDC3-201ENST00000315127 C8orf58Q8NAV2 365 aa17.64■□□□□ 0.41
EDC3-201ENST00000315127 ABCA9Q8IUA7 1624 aa17.64■□□□□ 0.41
EDC3-201ENST00000315127 NKTRP30414 1462 aaKnown RBP17.63■□□□□ 0.41
EDC3-201ENST00000315127 PIK3C2GO75747 1445 aa17.63■□□□□ 0.41
EDC3-201ENST00000315127 EFCAB6Q5THR3 1501 aa17.62■□□□□ 0.41
EDC3-201ENST00000315127 MAP3K19Q56UN5 1328 aa17.62■□□□□ 0.41
EDC3-201ENST00000315127 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
EDC3-201ENST00000315127 POLR3AO14802 1390 aaPredicted RBP17.62■□□□□ 0.41
EDC3-201ENST00000315127 TMEM2Q9UHN6 1383 aa17.62■□□□□ 0.41
EDC3-201ENST00000315127 UNC13BO14795 1591 aa17.61■□□□□ 0.41
EDC3-201ENST00000315127 PRR36Q9H6K5 1346 aa17.61■□□□□ 0.41
EDC3-201ENST00000315127 BACH2Q9BYV9 841 aa17.61■□□□□ 0.41
EDC3-201ENST00000315127 RILPL2Q969X0 211 aa17.6■□□□□ 0.41
EDC3-201ENST00000315127 CEP152O94986 1710 aa17.6■□□□□ 0.41
EDC3-201ENST00000315127 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
EDC3-201ENST00000315127 CHMP4BQ9H444 224 aaKnown RBP17.59■□□□□ 0.41
EDC3-201ENST00000315127 TRIM35Q9UPQ4 493 aa17.59■□□□□ 0.41
EDC3-201ENST00000315127 ROBO2Q9HCK4 1378 aa17.59■□□□□ 0.41
EDC3-201ENST00000315127 HSP90AB1P08238 724 aaKnown RBP17.59■□□□□ 0.41
EDC3-201ENST00000315127 API5Q9BZZ5 524 aaKnown RBP17.59■□□□□ 0.41
EDC3-201ENST00000315127 GAS2L2Q8NHY3 880 aa17.58■□□□□ 0.4
EDC3-201ENST00000315127 GZF1Q9H116 711 aaPredicted RBP17.58■□□□□ 0.4
EDC3-201ENST00000315127 TRPM1Q7Z4N2 1603 aa17.58■□□□□ 0.4
EDC3-201ENST00000315127 EYA1Q99502 592 aa17.57■□□□□ 0.4
EDC3-201ENST00000315127 RNF17Q9BXT8 1623 aaKnown RBP17.57■□□□□ 0.4
EDC3-201ENST00000315127 MYL6BP14649 208 aa17.57■□□□□ 0.4
EDC3-201ENST00000315127 PIP4K2AP48426 406 aaPredicted RBP17.57■□□□□ 0.4
EDC3-201ENST00000315127 KRT28Q7Z3Y7 464 aa17.57■□□□□ 0.4
EDC3-201ENST00000315127 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
EDC3-201ENST00000315127 KIDINS220Q9ULH0 1771 aa17.57■□□□□ 0.4
EDC3-201ENST00000315127 TET3O43151 1660 aa17.57■□□□□ 0.4
EDC3-201ENST00000315127 MTHFSDQ2M296 383 aaKnown RBP17.57■□□□□ 0.4
EDC3-201ENST00000315127 PRDM11Q9NQV5 511 aa17.57■□□□□ 0.4
EDC3-201ENST00000315127 C9orf78Q9NZ63 289 aaPredicted RBP17.56■□□□□ 0.4
EDC3-201ENST00000315127 SMARCA5O60264 1052 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms