RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 MYO3AQ8NEV4 1616 aa20.92■□□□□ 0.94
SSH3-201ENST00000308127 GOLGA6L3A6NEY3 463 aa20.91■□□□□ 0.94
SSH3-201ENST00000308127 TRAK2O60296 914 aa20.91■□□□□ 0.94
SSH3-201ENST00000308127 HSCBQ8IWL3 235 aa20.91■□□□□ 0.94
SSH3-201ENST00000308127 ZBTB40Q9NUA8 1239 aa20.9■□□□□ 0.94
SSH3-201ENST00000308127 VGFO15240 615 aaPredicted RBP20.89■□□□□ 0.94
SSH3-201ENST00000308127 ANKRD45Q5TZF3 282 aa20.89■□□□□ 0.93
SSH3-201ENST00000308127 RBM42Q9BTD8 480 aaKnown RBP20.89■□□□□ 0.93
SSH3-201ENST00000308127 CHMP5Q9NZZ3 219 aa20.89■□□□□ 0.93
SSH3-201ENST00000308127 DIAPH1O60610 1272 aaKnown RBP20.88■□□□□ 0.93
SSH3-201ENST00000308127 PRKAR2BP31323 418 aa20.88■□□□□ 0.93
SSH3-201ENST00000308127 HDAC1Q13547 482 aaPredicted RBP20.88■□□□□ 0.93
SSH3-201ENST00000308127 AAMPQ13685 434 aa20.88■□□□□ 0.93
SSH3-201ENST00000308127 TSPYL6Q8N831 410 aa20.88■□□□□ 0.93
SSH3-201ENST00000308127 CABP1Q9NZU7 370 aa20.88■□□□□ 0.93
SSH3-201ENST00000308127 ARAP3Q8WWN8 1544 aa20.88■□□□□ 0.93
SSH3-201ENST00000308127 L1TD1Q5T7N2 865 aaKnown RBP20.87■□□□□ 0.93
SSH3-201ENST00000308127 CD2BP2O95400 341 aaKnown RBP20.87■□□□□ 0.93
SSH3-201ENST00000308127 SMC5Q8IY18 1101 aa20.87■□□□□ 0.93
SSH3-201ENST00000308127 GLI2P10070 1586 aa20.87■□□□□ 0.93
SSH3-201ENST00000308127 PHACTR3Q96KR7 559 aa20.87■□□□□ 0.93
SSH3-201ENST00000308127 ZC3H13Q5T200 1668 aaKnown RBP20.86■□□□□ 0.93
SSH3-201ENST00000308127 SETBP1Q9Y6X0 1596 aa20.86■□□□□ 0.93
SSH3-201ENST00000308127 PPLO60437 1756 aa20.86■□□□□ 0.93
SSH3-201ENST00000308127 NPM1P06748 294 aaKnown RBP eCLIP20.84■□□□□ 0.93
SSH3-201ENST00000308127 HSP90AB1P08238 724 aaKnown RBP20.84■□□□□ 0.93
SSH3-201ENST00000308127 CHD1LQ86WJ1 897 aa20.84■□□□□ 0.93
SSH3-201ENST00000308127 ATAD2Q6PL18 1390 aa20.84■□□□□ 0.93
SSH3-201ENST00000308127 HSP90AA1P07900 732 aaKnown RBP20.83■□□□□ 0.92
SSH3-201ENST00000308127 FBXO31Q5XUX0 539 aaPredicted RBP20.83■□□□□ 0.92
SSH3-201ENST00000308127 ZRANB1Q9UGI0 708 aa20.83■□□□□ 0.92
SSH3-201ENST00000308127 ABCC11Q96J66 1382 aa20.82■□□□□ 0.92
SSH3-201ENST00000308127 NUCB1Q02818 461 aa20.82■□□□□ 0.92
SSH3-201ENST00000308127 ZNF692Q9BU19 519 aaPredicted RBP20.82■□□□□ 0.92
SSH3-201ENST00000308127 WAPLQ7Z5K2 1190 aa20.82■□□□□ 0.92
SSH3-201ENST00000308127 CDK19Q9BWU1 502 aa20.82■□□□□ 0.92
SSH3-201ENST00000308127 NEURL4Q96JN8 1562 aa20.82■□□□□ 0.92
SSH3-201ENST00000308127 CAMSAP1Q5T5Y3 1602 aa20.82■□□□□ 0.92
SSH3-201ENST00000308127 TERF2IPQ9NYB0 399 aa20.81■□□□□ 0.92
SSH3-201ENST00000308127 FRMPD1Q5SYB0 1578 aa20.81■□□□□ 0.92
SSH3-201ENST00000308127 RPGRIP1LQ68CZ1 1315 aa20.81■□□□□ 0.92
SSH3-201ENST00000308127 TNPO1Q92973 898 aaKnown RBP20.8■□□□□ 0.92
SSH3-201ENST00000308127 EMILIN1Q9Y6C2 1016 aa20.8■□□□□ 0.92
SSH3-201ENST00000308127 APBB1O00213 710 aa20.8■□□□□ 0.92
SSH3-201ENST00000308127 DCTN1Q14203 1278 aa20.8■□□□□ 0.92
SSH3-201ENST00000308127 FAM83GA6ND36 823 aa20.79■□□□□ 0.92
SSH3-201ENST00000308127 IPO8O15397 1037 aaKnown RBP20.79■□□□□ 0.92
SSH3-201ENST00000308127 ADGRB2O60241 1585 aa20.79■□□□□ 0.92
SSH3-201ENST00000308127 NSD2O96028 1365 aa20.79■□□□□ 0.92
SSH3-201ENST00000308127 KIF16BQ96L93 1317 aa20.79■□□□□ 0.92
SSH3-201ENST00000308127 FSD2A1L4K1 749 aa20.79■□□□□ 0.92
SSH3-201ENST00000308127 CT47B1P0C2W7 299 aaPredicted RBP20.78■□□□□ 0.92
SSH3-201ENST00000308127 ARHGEF28Q8N1W1 1705 aaKnown RBP20.78■□□□□ 0.92
SSH3-201ENST00000308127 NAP1L5Q96NT1 182 aaPredicted RBP20.77■□□□□ 0.92
SSH3-201ENST00000308127 SIGLEC1Q9BZZ2 1709 aa20.77■□□□□ 0.92
SSH3-201ENST00000308127 LMTK2Q8IWU2 1503 aa20.77■□□□□ 0.92
SSH3-201ENST00000308127 HDGFL2Q7Z4V5 671 aaPredicted RBP20.77■□□□□ 0.92
SSH3-201ENST00000308127 ABCC3O15438 1527 aa20.77■□□□□ 0.92
SSH3-201ENST00000308127 COL3A1P02461 1466 aaPredicted RBP20.77■□□□□ 0.91
SSH3-201ENST00000308127 NCKAP5LQ9HCH0 1330 aa20.77■□□□□ 0.91
SSH3-201ENST00000308127 SIRT2Q8IXJ6 389 aa20.76■□□□□ 0.91
SSH3-201ENST00000308127 STAG3Q9UJ98 1225 aa20.76■□□□□ 0.91
SSH3-201ENST00000308127 GAS2L3Q86XJ1 694 aa20.76■□□□□ 0.91
SSH3-201ENST00000308127 TBC1D9Q6ZT07 1266 aa20.75■□□□□ 0.91
SSH3-201ENST00000308127 KIF2CQ99661 725 aa20.75■□□□□ 0.91
SSH3-201ENST00000308127 POLKQ9UBT6 870 aa20.75■□□□□ 0.91
SSH3-201ENST00000308127 ZBTB7BO15156 539 aaPredicted RBP20.75■□□□□ 0.91
SSH3-201ENST00000308127 RSPH6AQ9H0K4 717 aa20.75■□□□□ 0.91
SSH3-201ENST00000308127 PPIP5K1Q6PFW1 1433 aa20.75■□□□□ 0.91
SSH3-201ENST00000308127 POGZQ7Z3K3 1410 aa20.75■□□□□ 0.91
SSH3-201ENST00000308127 ZMYM3Q14202 1370 aa20.74■□□□□ 0.91
SSH3-201ENST00000308127 VAMP4O75379 141 aa20.74■□□□□ 0.91
SSH3-201ENST00000308127 RRS1Q15050 365 aaKnown RBP20.74■□□□□ 0.91
SSH3-201ENST00000308127 KRT24Q2M2I5 525 aa20.74■□□□□ 0.91
SSH3-201ENST00000308127 NEXMIFQ5QGS0 1516 aa20.73■□□□□ 0.91
SSH3-201ENST00000308127 C16orf71Q8IYS4 520 aaPredicted RBP20.73■□□□□ 0.91
SSH3-201ENST00000308127 GRPEL1Q9HAV7 217 aa20.73■□□□□ 0.91
SSH3-201ENST00000308127 C8orf58Q8NAV2 365 aa20.73■□□□□ 0.91
SSH3-201ENST00000308127 MBIPQ9NS73 344 aa20.73■□□□□ 0.91
SSH3-201ENST00000308127 USP32Q8NFA0 1604 aa20.73■□□□□ 0.91
SSH3-201ENST00000308127 SSFA2P28290 1259 aa20.72■□□□□ 0.91
SSH3-201ENST00000308127 RBM25P49756 843 aaKnown RBP20.72■□□□□ 0.91
SSH3-201ENST00000308127 NME9Q86XW9 330 aa20.72■□□□□ 0.91
SSH3-201ENST00000308127 CD163L1Q9NR16 1453 aa20.72■□□□□ 0.91
SSH3-201ENST00000308127 MRPL50Q8N5N7 158 aaKnown RBP20.72■□□□□ 0.91
SSH3-201ENST00000308127 GAS2L2Q8NHY3 880 aa20.71■□□□□ 0.91
SSH3-201ENST00000308127 IL16Q14005 1332 aa20.71■□□□□ 0.91
SSH3-201ENST00000308127 FCHSD2O94868 740 aa20.7■□□□□ 0.9
SSH3-201ENST00000308127 OTUD7AQ8TE49 926 aaPredicted RBP20.7■□□□□ 0.9
SSH3-201ENST00000308127 LRRC7Q96NW7 1537 aa20.7■□□□□ 0.9
SSH3-201ENST00000308127 ERBB4Q15303 1308 aa20.69■□□□□ 0.9
SSH3-201ENST00000308127 DDX11L8A8MPP1 907 aa20.69■□□□□ 0.9
SSH3-201ENST00000308127 BMP2KLQ5H9B9 411 aa20.69■□□□□ 0.9
SSH3-201ENST00000308127 PNNQ9H307 717 aaKnown RBP20.69■□□□□ 0.9
SSH3-201ENST00000308127 HECW2Q9P2P5 1572 aa20.69■□□□□ 0.9
SSH3-201ENST00000308127 DDIT3P35638 169 aa20.68■□□□□ 0.9
SSH3-201ENST00000308127 NFE2L2Q16236 605 aa20.68■□□□□ 0.9
SSH3-201ENST00000308127 TWISTNBQ3B726 338 aaPredicted RBP20.68■□□□□ 0.9
SSH3-201ENST00000308127 ALDH1L2Q3SY69 923 aa20.68■□□□□ 0.9
SSH3-201ENST00000308127 SOX12O15370 315 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms