RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 ZKSCAN1P17029 563 aaPredicted RBP22.36■■□□□ 1.17
ITGB5-201ENST00000296181 ZNF330Q9Y3S2 320 aaPredicted RBP22.36■■□□□ 1.17
ITGB5-201ENST00000296181 BICD2Q8TD16 824 aa22.35■■□□□ 1.17
ITGB5-201ENST00000296181 EID1Q9Y6B2 187 aa22.35■■□□□ 1.17
ITGB5-201ENST00000296181 RALGAPBQ86X10 1494 aa22.35■■□□□ 1.17
ITGB5-201ENST00000296181 SF3A1Q15459 793 aaKnown RBP22.35■■□□□ 1.17
ITGB5-201ENST00000296181 TSPY26PQ9H489 355 aa22.35■■□□□ 1.17
ITGB5-201ENST00000296181 FAM184AQ8NB25 1140 aa22.34■■□□□ 1.17
ITGB5-201ENST00000296181 SYCE3A1L190 88 aa22.34■■□□□ 1.17
ITGB5-201ENST00000296181 SLC4A2P04920 1241 aa22.34■■□□□ 1.17
ITGB5-201ENST00000296181 IFT57Q9NWB7 429 aa22.33■■□□□ 1.17
ITGB5-201ENST00000296181 C9orf78Q9NZ63 289 aaPredicted RBP22.33■■□□□ 1.17
ITGB5-201ENST00000296181 ATP10BO94823 1461 aa22.33■■□□□ 1.16
ITGB5-201ENST00000296181 ZNF771Q7L3S4 317 aaPredicted RBP22.33■■□□□ 1.16
ITGB5-201ENST00000296181 FBXW7Q969H0 707 aa22.33■■□□□ 1.16
ITGB5-201ENST00000296181 MAP7D2Q96T17 732 aa22.33■■□□□ 1.16
ITGB5-201ENST00000296181 UQCRHLA0A096LP55 91 aa22.32■■□□□ 1.16
ITGB5-201ENST00000296181 UQCRHP07919 91 aa22.32■■□□□ 1.16
ITGB5-201ENST00000296181 ERC2O15083 957 aa22.32■■□□□ 1.16
ITGB5-201ENST00000296181 CWC22Q9HCG8 908 aaKnown RBP22.32■■□□□ 1.16
ITGB5-201ENST00000296181 CFAP43Q8NDM7 1665 aa22.32■■□□□ 1.16
ITGB5-201ENST00000296181 RUFY2Q8WXA3 655 aa22.32■■□□□ 1.16
ITGB5-201ENST00000296181 SURF6O75683 361 aaKnown RBP22.31■■□□□ 1.16
ITGB5-201ENST00000296181 GPRASP1Q5JY77 1395 aa22.31■■□□□ 1.16
ITGB5-201ENST00000296181 XPCQ01831 940 aaPredicted RBP22.31■■□□□ 1.16
ITGB5-201ENST00000296181 SPC24Q8NBT2 197 aa22.31■■□□□ 1.16
ITGB5-201ENST00000296181 SMARCA5O60264 1052 aaPredicted RBP22.3■■□□□ 1.16
ITGB5-201ENST00000296181 IFIT2P09913 472 aaKnown RBP22.3■■□□□ 1.16
ITGB5-201ENST00000296181 FOSBP53539 338 aa22.3■■□□□ 1.16
ITGB5-201ENST00000296181 HDAC5Q9UQL6 1122 aa22.3■■□□□ 1.16
ITGB5-201ENST00000296181 SULT6B1Q6IMI4 303 aa22.29■■□□□ 1.16
ITGB5-201ENST00000296181 CHMP4AQ9BY43 222 aa22.29■■□□□ 1.16
ITGB5-201ENST00000296181 KIF14Q15058 1648 aa22.29■■□□□ 1.16
ITGB5-201ENST00000296181 DCTN1Q14203 1278 aa22.29■■□□□ 1.16
ITGB5-201ENST00000296181 CTTNBP2Q8WZ74 1663 aa22.29■■□□□ 1.16
ITGB5-201ENST00000296181 KDM2BQ8NHM5 1336 aa22.29■■□□□ 1.16
ITGB5-201ENST00000296181 UBE2Q2Q8WVN8 375 aa22.29■■□□□ 1.16
ITGB5-201ENST00000296181 GORABQ5T7V8 394 aa22.29■■□□□ 1.16
ITGB5-201ENST00000296181 NUTM2GQ5VZR2 741 aa22.28■■□□□ 1.16
ITGB5-201ENST00000296181 UBTFL1P0CB47 393 aaPredicted RBP22.28■■□□□ 1.16
ITGB5-201ENST00000296181 TEFQ10587 303 aa22.28■■□□□ 1.16
ITGB5-201ENST00000296181 TXNDC2Q86VQ3 553 aa22.28■■□□□ 1.16
ITGB5-201ENST00000296181 UPF3BQ9BZI7 483 aaKnown RBP22.28■■□□□ 1.16
ITGB5-201ENST00000296181 RRAGDQ9NQL2 400 aaPredicted RBP22.28■■□□□ 1.16
ITGB5-201ENST00000296181 TBC1D9Q6ZT07 1266 aa22.27■■□□□ 1.16
ITGB5-201ENST00000296181 RBM42Q9BTD8 480 aaKnown RBP22.27■■□□□ 1.16
ITGB5-201ENST00000296181 CDK19Q9BWU1 502 aa22.27■■□□□ 1.16
ITGB5-201ENST00000296181 DMRT2Q9Y5R5 561 aa22.27■■□□□ 1.16
ITGB5-201ENST00000296181 CLCN1P35523 988 aa22.26■■□□□ 1.15
ITGB5-201ENST00000296181 TPM4P67936 248 aa22.26■■□□□ 1.15
ITGB5-201ENST00000296181 MAP4K4O95819 1239 aaPredicted RBP22.26■■□□□ 1.15
ITGB5-201ENST00000296181 RRS1Q15050 365 aaKnown RBP22.26■■□□□ 1.15
ITGB5-201ENST00000296181 EXOC6BQ9Y2D4 811 aa22.26■■□□□ 1.15
ITGB5-201ENST00000296181 TCOF1Q13428 1488 aaKnown RBP22.25■■□□□ 1.15
ITGB5-201ENST00000296181 FCHSD2O94868 740 aa22.25■■□□□ 1.15
ITGB5-201ENST00000296181 MCM2P49736 904 aa22.25■■□□□ 1.15
ITGB5-201ENST00000296181 PRAG1Q86YV5 1406 aa22.24■■□□□ 1.15
ITGB5-201ENST00000296181 TEX14Q8IWB6 1497 aa22.24■■□□□ 1.15
ITGB5-201ENST00000296181 RAPGEF6Q8TEU7 1601 aa22.24■■□□□ 1.15
ITGB5-201ENST00000296181 MTERF4Q7Z6M4 381 aaKnown RBP22.24■■□□□ 1.15
ITGB5-201ENST00000296181 SASS6Q6UVJ0 657 aa22.24■■□□□ 1.15
ITGB5-201ENST00000296181 BAG4O95429 457 aaKnown RBP22.23■■□□□ 1.15
ITGB5-201ENST00000296181 CSB-PGBD3P0DP91 1061 aa22.23■■□□□ 1.15
ITGB5-201ENST00000296181 GNAI2P04899 355 aa22.23■■□□□ 1.15
ITGB5-201ENST00000296181 GNAI3P08754 354 aa22.23■■□□□ 1.15
ITGB5-201ENST00000296181 IL1RAPL2Q9NP60 686 aa22.23■■□□□ 1.15
ITGB5-201ENST00000296181 ZNF428Q96B54 188 aa22.22■■□□□ 1.15
ITGB5-201ENST00000296181 TRIM5Q9C035 493 aa22.22■■□□□ 1.15
ITGB5-201ENST00000296181 SPATA31E1Q6ZUB1 1445 aa22.22■■□□□ 1.15
ITGB5-201ENST00000296181 FBLN1P23142 703 aa22.22■■□□□ 1.15
ITGB5-201ENST00000296181 KIF3AQ9Y496 699 aa22.22■■□□□ 1.15
ITGB5-201ENST00000296181 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.22■■□□□ 1.15
ITGB5-201ENST00000296181 TNNT3P45378 269 aaPredicted RBP22.22■■□□□ 1.15
ITGB5-201ENST00000296181 NFE2L2Q16236 605 aa22.22■■□□□ 1.15
ITGB5-201ENST00000296181 CCAR2Q8N163 923 aaKnown RBP22.22■■□□□ 1.15
ITGB5-201ENST00000296181 BMP2KLQ5H9B9 411 aa22.21■■□□□ 1.15
ITGB5-201ENST00000296181 MIS18AQ9NYP9 233 aa22.21■■□□□ 1.15
ITGB5-201ENST00000296181 RBM27Q9P2N5 1060 aaKnown RBP22.21■■□□□ 1.15
ITGB5-201ENST00000296181 WDR62O43379 1518 aa22.2■■□□□ 1.15
ITGB5-201ENST00000296181 GDPD2Q9HCC8 539 aa22.2■■□□□ 1.15
ITGB5-201ENST00000296181 CREBRFQ8IUR6 639 aa22.2■■□□□ 1.14
ITGB5-201ENST00000296181 MAGI3Q5TCQ9 1506 aa22.2■■□□□ 1.14
ITGB5-201ENST00000296181 PZPP20742 1482 aa22.2■■□□□ 1.14
ITGB5-201ENST00000296181 HMGN5P82970 282 aaKnown RBP22.2■■□□□ 1.14
ITGB5-201ENST00000296181 LRRCC1Q9C099 1032 aa22.19■■□□□ 1.14
ITGB5-201ENST00000296181 ZMYND15Q9H091 742 aa22.19■■□□□ 1.14
ITGB5-201ENST00000296181 CARD14Q9BXL6 1004 aa22.19■■□□□ 1.14
ITGB5-201ENST00000296181 SCAF11Q99590 1463 aaKnown RBP22.19■■□□□ 1.14
ITGB5-201ENST00000296181 TULP1O00294 542 aaPredicted RBP22.19■■□□□ 1.14
ITGB5-201ENST00000296181 RPAP2Q8IXW5 612 aaPredicted RBP22.18■■□□□ 1.14
ITGB5-201ENST00000296181 G3BP1Q13283 466 aaKnown RBP eCLIP22.18■■□□□ 1.14
ITGB5-201ENST00000296181 WDR33Q9C0J8 1336 aaKnown RBP22.18■■□□□ 1.14
ITGB5-201ENST00000296181 WAPLQ7Z5K2 1190 aa22.17■■□□□ 1.14
ITGB5-201ENST00000296181 RNF20Q5VTR2 975 aa22.17■■□□□ 1.14
ITGB5-201ENST00000296181 HOMER1Q86YM7 354 aa22.17■■□□□ 1.14
ITGB5-201ENST00000296181 NPHP1O15259 732 aa22.17■■□□□ 1.14
ITGB5-201ENST00000296181 HDAC1Q13547 482 aaPredicted RBP22.17■■□□□ 1.14
ITGB5-201ENST00000296181 CLASRPQ8N2M8 674 aaKnown RBP22.17■■□□□ 1.14
ITGB5-201ENST00000296181 ALDH1L2Q3SY69 923 aa22.16■■□□□ 1.14
ITGB5-201ENST00000296181 CNTROBQ8N137 903 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms