RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 REREQ9P2R6 1566 aa25.53■■□□□ 1.68
RARA-201ENST00000254066 DUOX2Q9NRD8 1548 aa25.52■■□□□ 1.68
RARA-201ENST00000254066 HNRNPMP52272 730 aaKnown RBP eCLIP25.52■■□□□ 1.68
RARA-201ENST00000254066 CCDC27Q2M243 656 aa25.52■■□□□ 1.68
RARA-201ENST00000254066 IQSEC2Q5JU85 1478 aa25.52■■□□□ 1.68
RARA-201ENST00000254066 KLHL40Q2TBA0 621 aa25.52■■□□□ 1.68
RARA-201ENST00000254066 HSP90AB1P08238 724 aaKnown RBP25.51■■□□□ 1.67
RARA-201ENST00000254066 CT47B1P0C2W7 299 aaPredicted RBP25.51■■□□□ 1.67
RARA-201ENST00000254066 RUNDC1Q96C34 613 aa25.5■■□□□ 1.67
RARA-201ENST00000254066 TRAPPC8Q9Y2L5 1435 aa25.5■■□□□ 1.67
RARA-201ENST00000254066 NOL7Q9UMY1 257 aaKnown RBP25.49■■□□□ 1.67
RARA-201ENST00000254066 SIGLEC1Q9BZZ2 1709 aa25.49■■□□□ 1.67
RARA-201ENST00000254066 SAMD9LQ8IVG5 1584 aa25.49■■□□□ 1.67
RARA-201ENST00000254066 ZNF445P59923 1031 aa25.48■■□□□ 1.67
RARA-201ENST00000254066 RIMS1Q86UR5 1692 aaKnown RBP25.48■■□□□ 1.67
RARA-201ENST00000254066 CSPP1Q1MSJ5 1256 aa25.48■■□□□ 1.67
RARA-201ENST00000254066 DIP2CQ9Y2E4 1556 aa25.48■■□□□ 1.67
RARA-201ENST00000254066 CEP152O94986 1710 aa25.48■■□□□ 1.67
RARA-201ENST00000254066 DYNC1I1O14576 645 aa25.47■■□□□ 1.67
RARA-201ENST00000254066 MCM5P33992 734 aa25.47■■□□□ 1.67
RARA-201ENST00000254066 ZKSCAN2Q63HK3 967 aa25.47■■□□□ 1.67
RARA-201ENST00000254066 SHPRHQ149N8 1683 aa25.47■■□□□ 1.67
RARA-201ENST00000254066 SPHKAPQ2M3C7 1700 aa25.46■■□□□ 1.67
RARA-201ENST00000254066 DZIP1LQ8IYY4 767 aaKnown RBP25.45■■□□□ 1.67
RARA-201ENST00000254066 KIAA1210Q9ULL0 1709 aa25.45■■□□□ 1.66
RARA-201ENST00000254066 TNNQ9UQP3 1299 aa25.44■■□□□ 1.66
RARA-201ENST00000254066 PDLIM2Q96JY6 352 aa25.44■■□□□ 1.66
RARA-201ENST00000254066 ABCA6Q8N139 1617 aa25.43■■□□□ 1.66
RARA-201ENST00000254066 FER1L4A9Z1Z3 1794 aa25.43■■□□□ 1.66
RARA-201ENST00000254066 AGLP35573 1532 aa25.43■■□□□ 1.66
RARA-201ENST00000254066 SYCP2Q9BX26 1530 aa25.43■■□□□ 1.66
RARA-201ENST00000254066 DDX19BQ9UMR2 479 aa25.42■■□□□ 1.66
RARA-201ENST00000254066 R3HCC1Q9Y3T6 440 aaKnown RBP25.42■■□□□ 1.66
RARA-201ENST00000254066 KIF16BQ96L93 1317 aa25.41■■□□□ 1.66
RARA-201ENST00000254066 K7ELQ4 463 aaPredicted RBP25.41■■□□□ 1.66
RARA-201ENST00000254066 FTSJ3Q8IY81 847 aaKnown RBP25.41■■□□□ 1.66
RARA-201ENST00000254066 FAM13BQ9NYF5 915 aa25.41■■□□□ 1.66
RARA-201ENST00000254066 KIDINS220Q9ULH0 1771 aa25.41■■□□□ 1.66
RARA-201ENST00000254066 MLECQ14165 292 aa25.39■■□□□ 1.66
RARA-201ENST00000254066 DDX49Q9Y6V7 483 aaKnown RBP25.39■■□□□ 1.66
RARA-201ENST00000254066 TCP11L2Q8N4U5 519 aa25.39■■□□□ 1.66
RARA-201ENST00000254066 UQCRHLA0A096LP55 91 aa25.38■■□□□ 1.65
RARA-201ENST00000254066 UQCRHP07919 91 aa25.38■■□□□ 1.65
RARA-201ENST00000254066 SPAG9O60271 1321 aaKnown RBP25.38■■□□□ 1.65
RARA-201ENST00000254066 UTP14CQ5TAP6 766 aaKnown RBP25.38■■□□□ 1.65
RARA-201ENST00000254066 KIF2CQ99661 725 aa25.36■■□□□ 1.65
RARA-201ENST00000254066 BAG4O95429 457 aaKnown RBP25.35■■□□□ 1.65
RARA-201ENST00000254066 BMP2KLQ5H9B9 411 aa25.35■■□□□ 1.65
RARA-201ENST00000254066 ZKSCAN5Q9Y2L8 839 aa25.35■■□□□ 1.65
RARA-201ENST00000254066 NUCB1Q02818 461 aa25.34■■□□□ 1.65
RARA-201ENST00000254066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.34■■□□□ 1.659e-7■□□□□ 9.1
RARA-201ENST00000254066 BCL2L13Q9BXK5 485 aa25.34■■□□□ 1.65
RARA-201ENST00000254066 ERVK-7P63135 1459 aa25.34■■□□□ 1.65
RARA-201ENST00000254066 SASS6Q6UVJ0 657 aa25.34■■□□□ 1.65
RARA-201ENST00000254066 CARD14Q9BXL6 1004 aa25.34■■□□□ 1.65
RARA-201ENST00000254066 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.33■■□□□ 1.65
RARA-201ENST00000254066 NAP1L2Q9ULW6 460 aaPredicted RBP25.33■■□□□ 1.65
RARA-201ENST00000254066 ATP7AQ04656 1500 aa25.33■■□□□ 1.65
RARA-201ENST00000254066 INO80Q9ULG1 1556 aaPredicted RBP25.32■■□□□ 1.64
RARA-201ENST00000254066 SSFA2P28290 1259 aa25.32■■□□□ 1.64
RARA-201ENST00000254066 TRPM2O94759 1503 aa25.32■■□□□ 1.64
RARA-201ENST00000254066 NUCB2P80303 420 aa25.31■■□□□ 1.64
RARA-201ENST00000254066 LMTK3Q96Q04 1460 aa25.31■■□□□ 1.64
RARA-201ENST00000254066 NEURL4Q96JN8 1562 aa25.3■■□□□ 1.64
RARA-201ENST00000254066 NEUROD2Q15784 382 aa25.29■■□□□ 1.64
RARA-201ENST00000254066 CCDC39Q9UFE4 941 aa25.29■■□□□ 1.64
RARA-201ENST00000254066 ZSCAN23Q3MJ62 389 aa25.28■■□□□ 1.64
RARA-201ENST00000254066 SBNO2Q9Y2G9 1366 aa25.28■■□□□ 1.64
RARA-201ENST00000254066 CCDC94Q9BW85 323 aaPredicted RBP25.27■■□□□ 1.64
RARA-201ENST00000254066 RRP7AQ9Y3A4 280 aaKnown RBP25.27■■□□□ 1.64
RARA-201ENST00000254066 ADGRB2O60241 1585 aa25.27■■□□□ 1.64
RARA-201ENST00000254066 TRIM27P14373 513 aa25.27■■□□□ 1.64
RARA-201ENST00000254066 ATF7IPQ6VMQ6 1270 aa25.27■■□□□ 1.64
RARA-201ENST00000254066 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
RARA-201ENST00000254066 ZBTB40Q9NUA8 1239 aa25.27■■□□□ 1.64
RARA-201ENST00000254066 XPCQ01831 940 aaPredicted RBP25.26■■□□□ 1.63
RARA-201ENST00000254066 DMTNQ08495 405 aa25.26■■□□□ 1.63
RARA-201ENST00000254066 BRD2P25440 801 aaKnown RBP25.25■■□□□ 1.63
RARA-201ENST00000254066 CHD1LQ86WJ1 897 aa25.25■■□□□ 1.63
RARA-201ENST00000254066 GAS2L2Q8NHY3 880 aa25.25■■□□□ 1.63
RARA-201ENST00000254066 PAXIP1Q6ZW49 1069 aaPredicted RBP25.25■■□□□ 1.63
RARA-201ENST00000254066 CFAP44Q96MT7 982 aa25.25■■□□□ 1.63
RARA-201ENST00000254066 MYO3AQ8NEV4 1616 aa25.25■■□□□ 1.63
RARA-201ENST00000254066 USP32Q8NFA0 1604 aa25.25■■□□□ 1.63
RARA-201ENST00000254066 NCLP19338 710 aaKnown RBP25.24■■□□□ 1.63
RARA-201ENST00000254066 ITPRIPQ8IWB1 547 aa25.24■■□□□ 1.63
RARA-201ENST00000254066 RBSNQ9H1K0 784 aa25.24■■□□□ 1.63
RARA-201ENST00000254066 CD2BP2O95400 341 aaKnown RBP25.24■■□□□ 1.63
RARA-201ENST00000254066 SMC4Q9NTJ3 1288 aa25.24■■□□□ 1.63
RARA-201ENST00000254066 LMBRD1Q9NUN5 540 aa25.24■■□□□ 1.63
RARA-201ENST00000254066 PTPRTO14522 1441 aa25.23■■□□□ 1.63
RARA-201ENST00000254066 CYP2E1P05181 493 aaPredicted RBP25.23■■□□□ 1.63
RARA-201ENST00000254066 MORC1Q86VD1 984 aa25.23■■□□□ 1.63
RARA-201ENST00000254066 CFAP53Q96M91 514 aa25.23■■□□□ 1.63
RARA-201ENST00000254066 CAVIN1Q6NZI2 390 aaKnown RBP25.21■■□□□ 1.63
RARA-201ENST00000254066 PLPPR3Q6T4P5 718 aa25.21■■□□□ 1.63
RARA-201ENST00000254066 BBXQ8WY36 941 aaPredicted RBP25.21■■□□□ 1.63
RARA-201ENST00000254066 CWC22Q9HCG8 908 aaKnown RBP25.21■■□□□ 1.63
RARA-201ENST00000254066 PREX1Q8TCU6 1659 aa25.2■■□□□ 1.62
RARA-201ENST00000254066 ABCC11Q96J66 1382 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms