RNA–Protein interactions for RNA: ENSMUST00000208589.1

Smarca2-238, Transcript of Probable global transcription activator SNF2L2, mouse

TSL 5 BASIC

Gene Smarca2, Length 1,054 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Smarca2-238	ENSMUST00000208589	Abca8a	Q8K442	1620 aa		10.52	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	AU022751	B1B0V2	589 aa		10.52	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Iqgap1	Q9JKF1	1657 aa	Known RBP	10.51	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Hspa5	P20029	655 aa	Known RBP	10.51	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Iqub	Q8CDK3	788 aa		10.51	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Bcl11b	Q99PV8	884 aa		10.51	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Dot1l	Q6XZL8	1540 aa		10.51	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Gm11555	B1AQ89	175 aa		10.5	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Med1	Q925J9	1575 aa		10.5	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Kif21b	Q9QXL1	1668 aa		10.5	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Kif13a	Q9EQW7	1749 aa		10.5	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Utp14a	Q640M1	767 aa	Known RBP	10.49	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Stard8	Q8K031	1019 aa		10.49	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Sgip1	Q8VD37	806 aa		10.49	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Arhgef28	P97433	1693 aa		10.49	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Iqsec2	Q5DU25	1478 aa		10.49	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Slit3	Q9WVB4	1523 aa		10.48	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Myo3a	Q8K3H5	1613 aa		10.48	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Ppl	Q9R269	1755 aa		10.48	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Fan1	Q69ZT1	1020 aa		10.48	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Hnrnpm	Q9D0E1	729 aa	Known RBP	10.48	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Tns3	Q5SSZ5	1440 aa		10.48	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Zc3h13	E9Q784	1729 aa	Known RBP	10.47	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Hspa1l	P16627	641 aa		10.47	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Puf60	Q3UEB3	564 aa	Known RBP	10.47	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Atf3	Q60765	181 aa		10.47	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Gcgr	Q61606	485 aa		10.47	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Ano8	Q6PB70	1060 aa		10.47	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Asxl2	Q8BZ32	1370 aa		10.47	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Rims1	Q99NE5	1463 aa		10.47	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Fmr1nb	Q80ZA7	238 aa		10.46	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Slain2	Q8CI08	581 aa		10.46	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Stk26	Q99JT2	416 aa		10.46	□□□□□ -0.73
Smarca2-238	ENSMUST00000208589	Plxnc1	Q9QZC2	1574 aa		10.46	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Eif2ak4	Q9QZ05	1648 aa		10.46	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Ehbp1l1	Q99MS7	1716 aa		10.46	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Igha	A0A0A6YXW6	389 aa		10.45	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Evi5l	H3BKQ3	813 aa		10.45	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Tom1	O88746	492 aa		10.45	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Lhx6	Q9R1R0	363 aa		10.45	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Pbx2	O35984	430 aa		10.44	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Lrrc14b	Q3UJB3	510 aa		10.44	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Gli3	Q61602	1583 aa		10.43	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Polr3a	B2RXC6	1390 aa		10.43	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Stag3	O70576	1240 aa		10.43	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Aplp2	Q06335	707 aa		10.43	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Tulp4	Q9JIL5	1547 aa		10.43	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Tmem94	Q7TSH8	1360 aa		10.42	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Gimap5	Q8BWF2	308 aa		10.42	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Pcdhb20	Q91XZ9	799 aa		10.42	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Stra8	P70278	393 aa		10.41	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589		Q3UJC8	639 aa		10.41	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Brinp3	Q499E0	766 aa		10.41	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Tnnt3	Q9QZ47	272 aa		10.41	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Plekhg1	F6S200	1446 aa		10.41	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Dapk1	Q80YE7	1442 aa		10.41	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Cdk13	Q69ZA1	1511 aa	Known RBP	10.4	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Arap3	Q8R5G7	1538 aa		10.4	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Skiv2l	Q6NZR5	1244 aa		10.4	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Usp40	Q8BWR4	1235 aa		10.4	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Gtf2e1	Q9D0D5	440 aa		10.4	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Inpp5d	Q9ES52	1191 aa		10.4	□□□□□ -0.74
Smarca2-238	ENSMUST00000208589	Mbd5	B1AYB6	1498 aa		10.39	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Klra4	Q60651	263 aa		10.39	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Crim1	Q9JLL0	1037 aa		10.39	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Adamts13	Q769J6	1426 aa		10.39	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Cpsf1	Q9EPU4	1441 aa	Known RBP	10.39	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Lrrc7	Q80TE7	1490 aa		10.37	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	1700006A11Rik	B9EHI3	544 aa		10.37	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Gm10563	F6WIE4	79 aa		10.37	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Csrnp3	P59055	597 aa		10.37	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Srcin1	Q9QWI6	1250 aa		10.37	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Znf354b	Q9QXT9	601 aa		10.37	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Atp2b2	Q9R0K7	1198 aa		10.37	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Cenpj	Q569L8	1344 aa		10.36	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Cep152	A2AUM9	1736 aa	Known RBP	10.36	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Setd1a	E9PYH6	1716 aa		10.36	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Cps1	Q8C196	1500 aa		10.35	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Card11	Q8CIS0	1159 aa		10.35	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Slc5a4b	Q91ZP4	660 aa		10.35	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Thsd7a	Q69ZU6	1645 aa		10.35	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Prdm2	A2A7B5	1709 aa	Known RBP	10.35	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Gm11939	A2A592	99 aa		10.34	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Rundc1	Q0VDN7	615 aa		10.34	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Amigo3	Q8C2S7	508 aa		10.34	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Noa1	Q9JJG9	693 aa	Known RBP	10.34	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Ap3b2	Q9JME5	1082 aa		10.34	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Madd	Q80U28	1577 aa		10.34	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Tubgcp6	G5E8P0	1769 aa		10.34	□□□□□ -0.75
Smarca2-238	ENSMUST00000208589	Catip	B9EKE5	520 aa		10.33	□□□□□ -0.76
Smarca2-238	ENSMUST00000208589	Speer2	E9Q9U2	264 aa		10.33	□□□□□ -0.76
Smarca2-238	ENSMUST00000208589	Kcna6	Q61923	529 aa		10.33	□□□□□ -0.76
Smarca2-238	ENSMUST00000208589	Sirt1	Q923E4	737 aa		10.33	□□□□□ -0.76
Smarca2-238	ENSMUST00000208589	Nwd1	A6H603	1563 aa		10.33	□□□□□ -0.76
Smarca2-238	ENSMUST00000208589	Myom1	Q62234	1667 aa	Known RBP	10.33	□□□□□ -0.76
Smarca2-238	ENSMUST00000208589	Nphp4	P59240	1425 aa		10.33	□□□□□ -0.76
Smarca2-238	ENSMUST00000208589	Smg6	P61406	1418 aa	Known RBP	10.33	□□□□□ -0.76
Smarca2-238	ENSMUST00000208589	Dnmbp	Q6TXD4	1580 aa		10.32	□□□□□ -0.76
Smarca2-238	ENSMUST00000208589	Ttll13	A4Q9F6	804 aa		10.32	□□□□□ -0.76
Smarca2-238	ENSMUST00000208589	Gabbr2	Q80T41	940 aa		10.32	□□□□□ -0.76

Retrieved 100 of 22,080 RNA–protein pairs in 70.2 ms