RNA–Protein interactions for RNA: ENSMUST00000185633.6

Xrn1-202, Transcript of 5'-3' exoribonuclease 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Xrn1, Length 10,256 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1-202ENSMUST00000185633 Atp1b4Q99ME6 356 aa5.03□□□□□ -1.6
Xrn1-202ENSMUST00000185633 Nsd2Q8BVE8 1365 aa5.03□□□□□ -1.6
Xrn1-202ENSMUST00000185633 Sall2Q9QX96 1004 aa5.03□□□□□ -1.6
Xrn1-202ENSMUST00000185633 Dip2bQ3UH60 1574 aa5.03□□□□□ -1.6
Xrn1-202ENSMUST00000185633 R3hcc1Q8BSI6 488 aa5.03□□□□□ -1.6
Xrn1-202ENSMUST00000185633 FocadA2AKG8 1798 aa5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Slc4a1apE9PX68 744 aa5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Rrp7aQ9D1C9 280 aaKnown RBP5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Nphp4P59240 1425 aa5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Trim30aP15533 496 aa5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Abcc6Q9R1S7 1498 aa5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Tpm3-rs7D3Z2H9 248 aa5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Ush1cQ9ES64 910 aa5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Trim26Q99PN3 545 aa5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Ubr1O70481 1757 aa5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 AampJ3QN89 436 aa5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Hmgb1P63158 215 aaKnown RBP5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Cabp1Q9JLK7 227 aa5.02□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Siglec1Q62230 1695 aa5.01□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Uhrf1bp1B2KF50 1429 aa5.01□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Mrs2Q5NCE8 434 aa5.01□□□□□ -1.61
Xrn1-202ENSMUST00000185633 MccE9PWI3 1003 aa5.01□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Erich6D3Z6S9 713 aa5□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Taf3Q5HZG4 932 aa5□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Znf771Q8BJ90 317 aa5□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Gtf3c3Q3TMP1 882 aa5□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Znf526Q8BI66 675 aa5□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Kif3bQ61771 747 aa5□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Cspp1B2RX88 1205 aa5□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Dctn1O08788 1281 aa5□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Anp32eP97822 260 aaKnown RBP5□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Mbd3Q9Z2D8 285 aaKnown RBP5□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Tpm3P21107 285 aaKnown RBP5□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Arfgef2A2A5R2 1792 aa4.99□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Pde3bQ61409 1100 aa4.99□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Naip7Q9JIB3 1402 aa4.99□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Hap1O35668 628 aa4.99□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Gps2Q921N8 327 aa4.98□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Fam43aQ8BUP8 424 aa4.98□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Rapgefl1Q68EF8 662 aa4.98□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Tmx4Q8C0L0 335 aa4.98□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Nyap1Q6PFX7 833 aa4.98□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Topaz1E5FYH1 1653 aa4.98□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Mrvi1Q9WUX5 899 aaKnown RBP4.97□□□□□ -1.61
Xrn1-202ENSMUST00000185633 PappaQ8R4K8 1624 aa4.97□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Prm3Q62100 101 aa4.97□□□□□ -1.61
Xrn1-202ENSMUST00000185633 KnstrnQ9D9Z1 312 aaKnown RBP4.97□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Marf1Q8BJ34 1730 aaKnown RBP4.97□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Sema6bO54951 886 aa4.97□□□□□ -1.61
Xrn1-202ENSMUST00000185633 1700123L14RikQ3V2K7 440 aa4.97□□□□□ -1.61
Xrn1-202ENSMUST00000185633 C3P01027 1663 aa4.97□□□□□ -1.61
Xrn1-202ENSMUST00000185633 GapdhsQ64467 440 aa4.97□□□□□ -1.61
Xrn1-202ENSMUST00000185633 BbxQ8VBW5 907 aa4.97□□□□□ -1.61
Xrn1-202ENSMUST00000185633 PtprvP70289 1705 aa4.97□□□□□ -1.61
Xrn1-202ENSMUST00000185633 Prdm10Q3UTQ7 1184 aa4.96□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Kank1E9Q238 1360 aa4.96□□□□□ -1.62
Xrn1-202ENSMUST00000185633 OvosQ3UU35 1456 aa4.96□□□□□ -1.62
Xrn1-202ENSMUST00000185633 P3h3Q8CG70 732 aa4.96□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Washc2Q6PGL7 1334 aa4.96□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Map3k7clP58500 142 aa4.96□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Pdcl3Q8BVF2 240 aa4.96□□□□□ -1.62
Xrn1-202ENSMUST00000185633 AU022751B1B0V2 589 aa4.96□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Dnai2A2AC93 623 aa4.95□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Kif7B7ZNG0 1348 aa4.95□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Mex3cQ05A36 652 aaKnown RBP4.95□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Ubr2Q6WKZ8 1755 aa4.95□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Trim55G3X8Y1 545 aa4.95□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Pcmtd1P59913 357 aa4.95□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Cwc22Q8C5N3 908 aaKnown RBP4.95□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Rufy1Q8BIJ7 712 aa4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Bcl9lQ67FY2 1494 aa4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Evi5lH3BKQ3 813 aa4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Tpm1P58771 284 aa4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Rad21Q61550 635 aaKnown RBP4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Tpm4Q6IRU2 248 aa4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Acsbg1Q99PU5 721 aa4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Lemd3Q9WU40 921 aa4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Bcl2l12Q9D3J3 255 aa4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 NudcO35685 332 aaKnown RBP4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Glipr1l2Q9CQ35 332 aa4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Ttll5Q8CHB8 1328 aa4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Dapk1Q80YE7 1442 aa4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Stk24Q99KH8 431 aa4.94□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Ralbp1Q62172 648 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Lrp6O88572 1613 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Ofd1Q80Z25 1017 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Def6Q8C2K1 630 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Chd4Q6PDQ2 1915 aaKnown RBP4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Kif3cO35066 796 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Znhit6Q3UFB2 460 aaKnown RBP4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Sgsm1Q8BPQ7 1093 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Tmc1Q8R4P5 757 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Iqcf3Q9D498 203 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Map2P20357 1828 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Dnai1Q8C0M8 701 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Gli2Q0VGT2 1544 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Smarce1O54941 411 aaKnown RBP4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Ddx60E9PZQ1 1711 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Pik3r4Q8VD65 1358 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Spryd3E9Q9B3 442 aa4.93□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms