RNA–Protein interactions for RNA: ENSMUST00000142613.1

Vamp8-202, Transcript of Vesicle-associated membrane protein 8, mousemouse

TSL 1 (best) BASIC

Gene Vamp8, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8-202ENSMUST00000142613 Talpid3E9PV87 1520 aa17.15■□□□□ 0.34
Vamp8-202ENSMUST00000142613 Brd1E9PZ26 1189 aaKnown RBP17.14■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Ciz1Q8VEH2 845 aa17.14■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Os9Q8K2C7 672 aa17.14■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Cetn4Q8K4K1 168 aa17.14■□□□□ 0.33
Vamp8-202ENSMUST00000142613 ErbinQ80TH2 1402 aa17.14■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Stk24Q99KH8 431 aa17.13■□□□□ 0.33
Vamp8-202ENSMUST00000142613 ImpactO55091 318 aa17.12■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Cog6Q8R3I3 657 aa17.12■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Rbm10Q99KG3 930 aaKnown RBP17.12■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Casq1O09165 405 aa17.12■□□□□ 0.33
Vamp8-202ENSMUST00000142613 OvosQ3UU35 1456 aa17.11■□□□□ 0.33
Vamp8-202ENSMUST00000142613 AU019823E9PUQ3 292 aa17.11■□□□□ 0.33
Vamp8-202ENSMUST00000142613 1700010I14RikQ7TPG0 532 aa17.11■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Usp40Q8BWR4 1235 aa17.11■□□□□ 0.33
Vamp8-202ENSMUST00000142613 FanciQ8K368 1330 aa17.11■□□□□ 0.33
Vamp8-202ENSMUST00000142613 PtmsQ9D0J8 101 aaKnown RBP17.1■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Erich6bQ9D4S6 220 aa17.1■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Myo5cE9Q1F5 1742 aa17.1■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Scaf11E9PZM7 1456 aaKnown RBP17.1■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Cald1E9QA15 768 aaKnown RBP17.09■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Irf5P56477 497 aa17.09■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Bag4Q8CI61 457 aa17.09■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Chmp4bQ9D8B3 224 aaKnown RBP17.09■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Srpk2O54781 681 aaKnown RBP17.08■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Ccdc171E9Q1U1 1324 aa17.08■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Erbb4Q61527 1308 aa17.08■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Adgrl1Q80TR1 1466 aa17.08■□□□□ 0.33
Vamp8-202ENSMUST00000142613 Mknk2Q8CDB0 459 aa17.08■□□□□ 0.32
Vamp8-202ENSMUST00000142613 PtmaP26350 111 aa17.07■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Trim26Q99PN3 545 aa17.06■□□□□ 0.32
Vamp8-202ENSMUST00000142613 BccipQ9CWI3 316 aa17.06■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Abca6Q8K441 1624 aa17.06■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Fndc1E9Q043 1732 aa17.06■□□□□ 0.32
Vamp8-202ENSMUST00000142613 DnmbpQ6TXD4 1580 aa17.06■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Cul9Q80TT8 1865 aa17.06■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Tmem131lQ3U3D7 1597 aa17.05■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Hecw2Q6I6G8 1578 aa17.05■□□□□ 0.32
Vamp8-202ENSMUST00000142613 LifrP42703 1092 aa17.05■□□□□ 0.32
Vamp8-202ENSMUST00000142613 CastP51125 788 aa17.05■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Wdr63B2RY71 923 aa17.04■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Tnnt2P50752 301 aa17.04■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Maco1Q7TQE6 664 aaKnown RBP17.04■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Zkscan1Q8BGS3 561 aaKnown RBP17.04■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Ppp1r3fQ9JIG4 799 aa17.04■□□□□ 0.32
Vamp8-202ENSMUST00000142613 P2rx7Q9Z1M0 595 aa17.04■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Eif2ak4Q9QZ05 1648 aa17.04■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Ttc37F8VPK0 1563 aa17.04■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Topbp1Q6ZQF0 1515 aa17.04■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Zfp91Q62511 572 aa17.03■□□□□ 0.32
Vamp8-202ENSMUST00000142613 AatkQ80YE4 1365 aa17.03■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Med14A2ABV5 1459 aaKnown RBP17.03■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Iqgap3F8VQ29 1632 aa17.03■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Apaf1O88879 1249 aa17.03■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Znf316Q6PGE4 1016 aa17.03■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Bloc1s4Q8VED2 215 aa17.03■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Glipr1l2Q9CQ35 332 aa17.03■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Cfap65Q3V0B4 1847 aa17.03■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Atp10aO54827 1508 aa17.02■□□□□ 0.32
Vamp8-202ENSMUST00000142613 NcapgE9PWG6 1004 aa17.02■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Fan1Q69ZT1 1020 aa17.02■□□□□ 0.32
Vamp8-202ENSMUST00000142613 4931400O07RikQ9D4M5 137 aa17.02■□□□□ 0.32
Vamp8-202ENSMUST00000142613 U2af1Q9D883 239 aaKnown RBP17.02■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Tfip11Q9ERA6 838 aaKnown RBP17.02■□□□□ 0.32
Vamp8-202ENSMUST00000142613 Rims1Q99NE5 1463 aa17.02■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Cgnl1Q6AW69 1298 aa17.01■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Tsen2Q6P7W5 460 aa17.01■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Ttc21aQ8C0S4 1314 aa17.01■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Anapc15-psA0A140T8L6 141 aa17.01■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Tbc1d9Q3UYK3 1264 aa17.01■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Gm156Q58A37 223 aa17■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Uggt1Q6P5E4 1551 aa17■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Gli2Q0VGT2 1544 aa17■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Ptch1Q61115 1434 aa17■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Znf541Q0GGX2 1363 aa17■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Cdk5rap2Q8K389 1822 aa17■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Depdc5P61460 1591 aa16.99■□□□□ 0.31
Vamp8-202ENSMUST00000142613 PaskQ8CEE6 1383 aa16.99■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Myo3aQ8K3H5 1613 aa16.99■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Rps6ka5Q8C050 863 aa16.98■□□□□ 0.31
Vamp8-202ENSMUST00000142613 InsrP15208 1372 aa16.98■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Prex1Q69ZK0 1650 aa16.98■□□□□ 0.31
Vamp8-202ENSMUST00000142613 G3bp1P97855 465 aaKnown RBP16.98■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Gzf1Q4VBD9 706 aa16.98■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Abca8aQ8K442 1620 aa16.98■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Ankrd50F7BE84 1390 aa16.97■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Naip7Q9JIB3 1402 aa16.97■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Kdm4aQ8BW72 1064 aa16.97■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Ccdc60Q8C4J0 545 aa16.97■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Ino80Q6ZPV2 1559 aa16.97■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Uhrf1bp1B2KF50 1429 aa16.97■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Gm45140A0A0N4SUM8 220 aa16.97■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Rasa1E9PYG6 1038 aa16.97■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Wdr78E9PYY5 807 aa16.97■□□□□ 0.31
Vamp8-202ENSMUST00000142613 AglF8VPN4 1532 aa16.96■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Cavin4A2AMM0 362 aa16.96■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Pnma3Q8JZW8 466 aa16.96■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Chrna2Q91X60 512 aa16.96■□□□□ 0.31
Vamp8-202ENSMUST00000142613 CenppQ9CZ92 286 aa16.96■□□□□ 0.31
Vamp8-202ENSMUST00000142613 Nek4Q9Z1J2 792 aa16.96■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms