RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Neurod2Q62414 383 aa33.8■■■■□ 3
Tpm1-216ENSMUST00000113707 Med1Q925J9 1575 aa33.79■■■■□ 3
Tpm1-216ENSMUST00000113707 Plekhh1Q80TI1 1356 aa33.79■■■■□ 3
Tpm1-216ENSMUST00000113707 Mon2Q80TL7 1715 aa33.79■■■■□ 3
Tpm1-216ENSMUST00000113707 Astn2Q80Z10 1352 aa33.78■■■■□ 3
Tpm1-216ENSMUST00000113707 Gm38655A0A286YDK6 273 aa33.77■■■■□ 3
Tpm1-216ENSMUST00000113707 Gm10563F6WIE4 79 aa33.76■■■■□ 3
Tpm1-216ENSMUST00000113707 Birc3O08863 600 aa33.76■■■□□ 2.99
Tpm1-216ENSMUST00000113707 Ppp1r15aP17564 657 aa33.75■■■□□ 2.99
Tpm1-216ENSMUST00000113707 Chd4Q6PDQ2 1915 aaKnown RBP33.74■■■□□ 2.99
Tpm1-216ENSMUST00000113707 Thsd7aQ69ZU6 1645 aa33.73■■■□□ 2.99
Tpm1-216ENSMUST00000113707 Tmem94Q7TSH8 1360 aa33.73■■■□□ 2.99
Tpm1-216ENSMUST00000113707 Znf541Q0GGX2 1363 aa33.72■■■□□ 2.99
Tpm1-216ENSMUST00000113707 Slc12a5Q91V14 1138 aa33.72■■■□□ 2.99
Tpm1-216ENSMUST00000113707 Idi1P58044 227 aa33.71■■■□□ 2.99
Tpm1-216ENSMUST00000113707 Apaf1O88879 1249 aa33.71■■■□□ 2.99
Tpm1-216ENSMUST00000113707 Tcerg1Q8CGF7 1100 aaKnown RBP33.71■■■□□ 2.99
Tpm1-216ENSMUST00000113707 NgefQ8CHT1 710 aa33.69■■■□□ 2.98
Tpm1-216ENSMUST00000113707 Tns3Q5SSZ5 1440 aa33.69■■■□□ 2.98
Tpm1-216ENSMUST00000113707 Fchsd2Q3USJ8 740 aa33.69■■■□□ 2.98
Tpm1-216ENSMUST00000113707 Ciz1Q8VEH2 845 aa33.68■■■□□ 2.98
Tpm1-216ENSMUST00000113707 Phlpp1Q8CHE4 1687 aa33.67■■■□□ 2.98
Tpm1-216ENSMUST00000113707 Mapk8ip3Q9ESN9 1337 aa33.67■■■□□ 2.98
Tpm1-216ENSMUST00000113707 Ap3b2Q9JME5 1082 aa33.65■■■□□ 2.98
Tpm1-216ENSMUST00000113707 CemipQ8BI06 1361 aa33.65■■■□□ 2.98
Tpm1-216ENSMUST00000113707 Nrxn3Q6P9K9 1571 aa33.65■■■□□ 2.98
Tpm1-216ENSMUST00000113707 Mdc1Q5PSV9 1707 aa33.64■■■□□ 2.98
Tpm1-216ENSMUST00000113707 C3P01027 1663 aa33.64■■■□□ 2.98
Tpm1-216ENSMUST00000113707 Sox12Q04890 314 aa33.64■■■□□ 2.98
Tpm1-216ENSMUST00000113707 Col14a1Q80X19 1797 aa33.64■■■□□ 2.98
Tpm1-216ENSMUST00000113707 NalcnQ8BXR5 1738 aa33.63■■■□□ 2.97
Tpm1-216ENSMUST00000113707 Unc13bQ9Z1N9 1602 aa33.63■■■□□ 2.97
Tpm1-216ENSMUST00000113707 Rwdd1Q9CQK7 243 aa33.63■■■□□ 2.97
Tpm1-216ENSMUST00000113707 PalmQ9Z0P4 383 aa33.61■■■□□ 2.97
Tpm1-216ENSMUST00000113707 Pik3c2aQ61194 1686 aa33.61■■■□□ 2.97
Tpm1-216ENSMUST00000113707 Fam135bQ9DAI6 1403 aa33.6■■■□□ 2.97
Tpm1-216ENSMUST00000113707 Cdk12Q14AX6 1484 aaKnown RBP33.6■■■□□ 2.97
Tpm1-216ENSMUST00000113707 Col16a1Q8BLX7 1580 aa33.59■■■□□ 2.97
Tpm1-216ENSMUST00000113707 Uhrf1bp1lA2RSJ4 1457 aa33.59■■■□□ 2.97
Tpm1-216ENSMUST00000113707 Cavin4A2AMM0 362 aa33.59■■■□□ 2.97
Tpm1-216ENSMUST00000113707 CenpbP27790 599 aa33.58■■■□□ 2.97
Tpm1-216ENSMUST00000113707 Uhrf1bp1B2KF50 1429 aa33.57■■■□□ 2.96
Tpm1-216ENSMUST00000113707 Dusp27Q148W8 1138 aa33.56■■■□□ 2.96
Tpm1-216ENSMUST00000113707 Atxn3Q9CVD2 355 aa33.56■■■□□ 2.96
Tpm1-216ENSMUST00000113707 Wdr43Q6ZQL4 677 aaKnown RBP33.55■■■□□ 2.96
Tpm1-216ENSMUST00000113707 Rsph6aQ8CDR2 708 aa33.55■■■□□ 2.96
Tpm1-216ENSMUST00000113707 NeflP08551 543 aa33.54■■■□□ 2.96
Tpm1-216ENSMUST00000113707 PaskQ8CEE6 1383 aa33.54■■■□□ 2.96
Tpm1-216ENSMUST00000113707 Mbd3Q9Z2D8 285 aaKnown RBP33.54■■■□□ 2.96
Tpm1-216ENSMUST00000113707 Spef2Q8C9J3 1734 aa33.53■■■□□ 2.96
Tpm1-216ENSMUST00000113707 Ubr1O70481 1757 aa33.52■■■□□ 2.96
Tpm1-216ENSMUST00000113707 Q4VA45 678 aa33.51■■■□□ 2.96
Tpm1-216ENSMUST00000113707 Gas2l2Q5SSG4 860 aa33.51■■■□□ 2.96
Tpm1-216ENSMUST00000113707 Frmpd2A0A140LI67 1392 aa33.51■■■□□ 2.95
Tpm1-216ENSMUST00000113707 Anp32aO35381 247 aa33.5■■■□□ 2.95
Tpm1-216ENSMUST00000113707 Dennd6aQ8BH65 605 aa33.49■■■□□ 2.95
Tpm1-216ENSMUST00000113707 Sipa1l2Q80TE4 1722 aa33.48■■■□□ 2.95
Tpm1-216ENSMUST00000113707 Scn7aB1AYL1 1681 aa33.46■■■□□ 2.95
Tpm1-216ENSMUST00000113707 Tmem2Q5FWI3 1383 aa33.46■■■□□ 2.95
Tpm1-216ENSMUST00000113707 Ppp4r2Q0VGB7 417 aa33.46■■■□□ 2.95
Tpm1-216ENSMUST00000113707 Scaf1Q5U4C3 1256 aaKnown RBP33.46■■■□□ 2.95
Tpm1-216ENSMUST00000113707 Prkrip1Q9CWV6 186 aaKnown RBP33.46■■■□□ 2.95
Tpm1-216ENSMUST00000113707 Map2P20357 1828 aa33.45■■■□□ 2.95
Tpm1-216ENSMUST00000113707 Swt1Q9DBQ9 907 aa33.45■■■□□ 2.95
Tpm1-216ENSMUST00000113707 Kcnh8P59111 1102 aa33.44■■■□□ 2.94
Tpm1-216ENSMUST00000113707 Nlgn1Q99K10 843 aa33.44■■■□□ 2.94
Tpm1-216ENSMUST00000113707 Eif4a2P10630 407 aa33.42■■■□□ 2.94
Tpm1-216ENSMUST00000113707 Atp7bQ64446 1462 aa33.42■■■□□ 2.94
Tpm1-216ENSMUST00000113707 TnikP83510 1323 aa33.41■■■□□ 2.94
Tpm1-216ENSMUST00000113707 Ksr2Q3UVC0 959 aa33.41■■■□□ 2.94
Tpm1-216ENSMUST00000113707 Ccar1Q8CH18 1146 aaKnown RBP33.4■■■□□ 2.94
Tpm1-216ENSMUST00000113707 Zfp777B9EKF4 885 aa33.39■■■□□ 2.94
Tpm1-216ENSMUST00000113707 Camta1A2A891 1682 aa33.39■■■□□ 2.94
Tpm1-216ENSMUST00000113707 Gm21190A0A0G2JGJ6 266 aa33.38■■■□□ 2.93
Tpm1-216ENSMUST00000113707 Rad17Q6NXW6 688 aa33.38■■■□□ 2.93
Tpm1-216ENSMUST00000113707 Cabp4Q8VHC5 271 aa33.36■■■□□ 2.93
Tpm1-216ENSMUST00000113707 Slain2Q8CI08 581 aa33.35■■■□□ 2.93
Tpm1-216ENSMUST00000113707 FancaQ9JL70 1439 aa33.35■■■□□ 2.93
Tpm1-216ENSMUST00000113707 Ttc21aQ8C0S4 1314 aa33.35■■■□□ 2.93
Tpm1-216ENSMUST00000113707 Brwd3A2AHJ4 1799 aa33.35■■■□□ 2.93
Tpm1-216ENSMUST00000113707 Apbb1Q9QXJ1 710 aa33.35■■■□□ 2.93
Tpm1-216ENSMUST00000113707 Slc35g1Q8BY79 368 aa33.33■■■□□ 2.93
Tpm1-216ENSMUST00000113707 Iqcf3Q9D498 203 aa33.33■■■□□ 2.93
Tpm1-216ENSMUST00000113707 Ankrd50F7BE84 1390 aa33.31■■■□□ 2.92
Tpm1-216ENSMUST00000113707 Scn4aQ9ER60 1841 aa33.31■■■□□ 2.92
Tpm1-216ENSMUST00000113707 Rapgef3Q8VCC8 918 aa33.31■■■□□ 2.92
Tpm1-216ENSMUST00000113707 Nolc1E9Q5C9 702 aaKnown RBP33.3■■■□□ 2.92
Tpm1-216ENSMUST00000113707 Ano8Q6PB70 1060 aa33.29■■■□□ 2.92
Tpm1-216ENSMUST00000113707 Col18a1P39061 1774 aa33.29■■■□□ 2.92
Tpm1-216ENSMUST00000113707 Nckap5lQ6GQX2 1323 aa33.29■■■□□ 2.92
Tpm1-216ENSMUST00000113707 NudcO35685 332 aaKnown RBP33.29■■■□□ 2.92
Tpm1-216ENSMUST00000113707 MpripP97434 1024 aa33.29■■■□□ 2.92
Tpm1-216ENSMUST00000113707 Stk31Q99MW1 1018 aa33.29■■■□□ 2.92
Tpm1-216ENSMUST00000113707 Mcm10Q0VBD2 885 aa33.28■■■□□ 2.92
Tpm1-216ENSMUST00000113707 PtprvP70289 1705 aa33.27■■■□□ 2.92
Tpm1-216ENSMUST00000113707 Ncapd2Q8K2Z4 1392 aa33.27■■■□□ 2.92
Tpm1-216ENSMUST00000113707 Fyb1O35601 819 aa33.27■■■□□ 2.92
Tpm1-216ENSMUST00000113707 CastP51125 788 aa33.27■■■□□ 2.92
Tpm1-216ENSMUST00000113707 Ncoa4Q5U4H9 625 aa33.27■■■□□ 2.92
Tpm1-216ENSMUST00000113707 Wdr17E9Q271 1322 aa33.26■■■□□ 2.91
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms