RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Znf316Q6PGE4 1016 aa20.05■□□□□ 0.8
Vcan-201ENSMUST00000109543 Slc12a5Q91V14 1138 aa20.05■□□□□ 0.8
Vcan-201ENSMUST00000109543 Dnajc5gQ8C632 165 aa20.05■□□□□ 0.8
Vcan-201ENSMUST00000109543 Fam135bQ9DAI6 1403 aa20.04■□□□□ 0.8
Vcan-201ENSMUST00000109543 Cavin4A2AMM0 362 aa20.03■□□□□ 0.8
Vcan-201ENSMUST00000109543 IghaA0A0A6YXW6 389 aa20.02■□□□□ 0.79
Vcan-201ENSMUST00000109543 Duxf3A0A0N4SV92 674 aa20.02■□□□□ 0.79
Vcan-201ENSMUST00000109543 Birc3O08863 600 aa20.02■□□□□ 0.79
Vcan-201ENSMUST00000109543 Trim28Q62318 834 aa20.02■□□□□ 0.79
Vcan-201ENSMUST00000109543 PalmQ9Z0P4 383 aa20.02■□□□□ 0.79
Vcan-201ENSMUST00000109543 Ciz1Q8VEH2 845 aa20.01■□□□□ 0.79
Vcan-201ENSMUST00000109543 ChgaP26339 463 aaKnown RBP20.01■□□□□ 0.79
Vcan-201ENSMUST00000109543 Ecm2Q5FW85 670 aa19.99■□□□□ 0.79
Vcan-201ENSMUST00000109543 Idi2Q8BFZ6 227 aa19.98■□□□□ 0.79
Vcan-201ENSMUST00000109543 Rlbp1Q9Z275 317 aa19.98■□□□□ 0.79
Vcan-201ENSMUST00000109543 Uhrf1bp1B2KF50 1429 aa19.98■□□□□ 0.79
Vcan-201ENSMUST00000109543 Znf541Q0GGX2 1363 aa19.97■□□□□ 0.79
Vcan-201ENSMUST00000109543 Fchsd2Q3USJ8 740 aa19.97■□□□□ 0.79
Vcan-201ENSMUST00000109543 Plppr3Q7TPB0 716 aa19.97■□□□□ 0.79
Vcan-201ENSMUST00000109543 Usp32F8VPZ3 1604 aa19.97■□□□□ 0.79
Vcan-201ENSMUST00000109543 CastP51125 788 aa19.97■□□□□ 0.79
Vcan-201ENSMUST00000109543 Q4VA45 678 aa19.97■□□□□ 0.79
Vcan-201ENSMUST00000109543 PaskQ8CEE6 1383 aa19.96■□□□□ 0.79
Vcan-201ENSMUST00000109543 Gemin5Q8BX17 1502 aaKnown RBP19.96■□□□□ 0.79
Vcan-201ENSMUST00000109543 Ttc21aQ8C0S4 1314 aa19.96■□□□□ 0.79
Vcan-201ENSMUST00000109543 AampJ3QN89 436 aa19.95■□□□□ 0.78
Vcan-201ENSMUST00000109543 Ppp1r15aP17564 657 aa19.95■□□□□ 0.78
Vcan-201ENSMUST00000109543 Ankrd50F7BE84 1390 aa19.95■□□□□ 0.78
Vcan-201ENSMUST00000109543 Chd2E9PZM4 1827 aaKnown RBP19.95■□□□□ 0.78
Vcan-201ENSMUST00000109543 Rbm25B2RY56 838 aaKnown RBP19.94■□□□□ 0.78
Vcan-201ENSMUST00000109543 NudcO35685 332 aaKnown RBP19.94■□□□□ 0.78
Vcan-201ENSMUST00000109543 Swt1Q9DBQ9 907 aa19.94■□□□□ 0.78
Vcan-201ENSMUST00000109543 PtpruB1AUH1 1446 aa19.94■□□□□ 0.78
Vcan-201ENSMUST00000109543 HnrnpmQ9D0E1 729 aaKnown RBP19.94■□□□□ 0.78
Vcan-201ENSMUST00000109543 Cps1Q8C196 1500 aa19.94■□□□□ 0.78
Vcan-201ENSMUST00000109543 Armcx1Q9CX83 456 aa19.93■□□□□ 0.78
Vcan-201ENSMUST00000109543 Ppp1r3fQ9JIG4 799 aa19.93■□□□□ 0.78
Vcan-201ENSMUST00000109543 Safb2Q80YR5 991 aaKnown RBP19.93■□□□□ 0.78
Vcan-201ENSMUST00000109543 Adamtsl3G3UXC7 1706 aa19.93■□□□□ 0.78
Vcan-201ENSMUST00000109543 Pik3r4Q8VD65 1358 aa19.92■□□□□ 0.78
Vcan-201ENSMUST00000109543 Uhrf1bp1lA2RSJ4 1457 aa19.91■□□□□ 0.78
Vcan-201ENSMUST00000109543 Slit3Q9WVB4 1523 aa19.91■□□□□ 0.78
Vcan-201ENSMUST00000109543 Ccdc60Q8C4J0 545 aa19.91■□□□□ 0.78
Vcan-201ENSMUST00000109543 Dip2bQ3UH60 1574 aa19.91■□□□□ 0.78
Vcan-201ENSMUST00000109543 Pik3c2bE9QAN8 1632 aa19.9■□□□□ 0.78
Vcan-201ENSMUST00000109543 Kif1aP33173 1695 aa19.9■□□□□ 0.78
Vcan-201ENSMUST00000109543 Rangap1P46061 589 aaKnown RBP19.9■□□□□ 0.78
Vcan-201ENSMUST00000109543 CatipB9EKE5 520 aa19.9■□□□□ 0.78
Vcan-201ENSMUST00000109543 Trim30dE9PWL0 497 aa19.9■□□□□ 0.78
Vcan-201ENSMUST00000109543 Nkx1-2P42580 305 aa19.89■□□□□ 0.77
Vcan-201ENSMUST00000109543 4930567H17RikQ3V0K5 233 aa19.89■□□□□ 0.77
Vcan-201ENSMUST00000109543 Atp7bQ64446 1462 aa19.89■□□□□ 0.77
Vcan-201ENSMUST00000109543 CanxP35564 591 aaKnown RBP19.88■□□□□ 0.77
Vcan-201ENSMUST00000109543 Ccdc27Q3V036 639 aa19.88■□□□□ 0.77
Vcan-201ENSMUST00000109543 PzpQ61838 1495 aa19.88■□□□□ 0.77
Vcan-201ENSMUST00000109543 Ccdc171E9Q1U1 1324 aa19.86■□□□□ 0.77
Vcan-201ENSMUST00000109543 Rsph6aQ8CDR2 708 aa19.86■□□□□ 0.77
Vcan-201ENSMUST00000109543 G3bp1P97855 465 aaKnown RBP19.85■□□□□ 0.77
Vcan-201ENSMUST00000109543 Znf330Q922H9 316 aa19.85■□□□□ 0.77
Vcan-201ENSMUST00000109543 Ak7Q9D2H2 614 aa19.85■□□□□ 0.77
Vcan-201ENSMUST00000109543 Cdc37l1Q9CZP7 335 aa19.85■□□□□ 0.77
Vcan-201ENSMUST00000109543 Tnrc6bQ8BKI2 1810 aaKnown RBP19.85■□□□□ 0.77
Vcan-201ENSMUST00000109543 Gm6268A2A3U9 297 aa19.84■□□□□ 0.77
Vcan-201ENSMUST00000109543 Mcm10Q0VBD2 885 aa19.84■□□□□ 0.77
Vcan-201ENSMUST00000109543 Ipo8Q7TMY7 1010 aa19.84■□□□□ 0.77
Vcan-201ENSMUST00000109543 Ccdc183A2AJB1 534 aa19.83■□□□□ 0.76
Vcan-201ENSMUST00000109543 Hoxb7P09024 217 aa19.83■□□□□ 0.76
Vcan-201ENSMUST00000109543 Q3UJC8 639 aa19.83■□□□□ 0.76
Vcan-201ENSMUST00000109543 Maco1Q7TQE6 664 aaKnown RBP19.83■□□□□ 0.76
Vcan-201ENSMUST00000109543 Cluap1Q8R3P7 413 aa19.82■□□□□ 0.76
Vcan-201ENSMUST00000109543 Cabp2Q9JLK4 216 aa19.82■□□□□ 0.76
Vcan-201ENSMUST00000109543 Iqcf3Q9D498 203 aa19.81■□□□□ 0.76
Vcan-201ENSMUST00000109543 Spef2Q8C9J3 1734 aa19.81■□□□□ 0.76
Vcan-201ENSMUST00000109543 NgefQ8CHT1 710 aa19.81■□□□□ 0.76
Vcan-201ENSMUST00000109543 Chd4Q6PDQ2 1915 aaKnown RBP19.81■□□□□ 0.76
Vcan-201ENSMUST00000109543 Dnai1Q8C0M8 701 aa19.8■□□□□ 0.76
Vcan-201ENSMUST00000109543 Senp3Q9EP97 568 aaKnown RBP19.8■□□□□ 0.76
Vcan-201ENSMUST00000109543 Ppp2r3aB2RXC8 1150 aa19.8■□□□□ 0.76
Vcan-201ENSMUST00000109543 Ppm1gQ61074 542 aa19.8■□□□□ 0.76
Vcan-201ENSMUST00000109543 Plin1Q8CGN5 517 aa19.8■□□□□ 0.76
Vcan-201ENSMUST00000109543 Sirt1Q923E4 737 aa19.8■□□□□ 0.76
Vcan-201ENSMUST00000109543 Nectin2P32507 530 aa19.79■□□□□ 0.76
Vcan-201ENSMUST00000109543 Tmco5bQ80X59 307 aa19.79■□□□□ 0.76
Vcan-201ENSMUST00000109543 Nutm1Q8BHP2 1126 aa19.79■□□□□ 0.76
Vcan-201ENSMUST00000109543 Gnai1B2RSH2 354 aa19.78■□□□□ 0.76
Vcan-201ENSMUST00000109543 Atl3Q91YH5 541 aa19.78■□□□□ 0.76
Vcan-201ENSMUST00000109543 Gnai3Q9DC51 354 aa19.78■□□□□ 0.76
Vcan-201ENSMUST00000109543 Rreb1Q3UH06 1700 aaKnown RBP19.78■□□□□ 0.76
Vcan-201ENSMUST00000109543 Plekhm2Q80TQ5 1018 aa19.77■□□□□ 0.76
Vcan-201ENSMUST00000109543 Astn2Q80Z10 1352 aa19.77■□□□□ 0.76
Vcan-201ENSMUST00000109543 Vamp4O70480 141 aa19.77■□□□□ 0.76
Vcan-201ENSMUST00000109543 Eif4a2P10630 407 aa19.77■□□□□ 0.76
Vcan-201ENSMUST00000109543 Hsp90ab1P11499 724 aaKnown RBP19.77■□□□□ 0.76
Vcan-201ENSMUST00000109543 KarsQ99MN1 595 aaKnown RBP19.76■□□□□ 0.75
Vcan-201ENSMUST00000109543 N4bp2F8VQG7 1678 aaKnown RBP19.76■□□□□ 0.75
Vcan-201ENSMUST00000109543 Nsd3Q6P2L6 1439 aa19.76■□□□□ 0.75
Vcan-201ENSMUST00000109543 Arap3Q8R5G7 1538 aa19.76■□□□□ 0.75
Vcan-201ENSMUST00000109543 AU019823E9PUQ3 292 aa19.75■□□□□ 0.75
Vcan-201ENSMUST00000109543 MpripP97434 1024 aa19.75■□□□□ 0.75
Vcan-201ENSMUST00000109543 Eif2s2Q99L45 331 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms