RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 Tnrc6bQ8BKI2 1810 aaKnown RBP10.61□□□□□ -0.71
Syne1-202ENSMUST00000095899 Nkx1-2P42580 305 aa10.6□□□□□ -0.71
Syne1-202ENSMUST00000095899 GsdmaQ9EST1 446 aa10.6□□□□□ -0.71
Syne1-202ENSMUST00000095899 Mdc1Q5PSV9 1707 aa10.6□□□□□ -0.71
Syne1-202ENSMUST00000095899 Plcd4Q8K3R3 807 aa10.6□□□□□ -0.71
Syne1-202ENSMUST00000095899 NalcnQ8BXR5 1738 aa10.59□□□□□ -0.71
Syne1-202ENSMUST00000095899 N4bp2F8VQG7 1678 aaKnown RBP10.59□□□□□ -0.71
Syne1-202ENSMUST00000095899 Slit3Q9WVB4 1523 aa10.59□□□□□ -0.71
Syne1-202ENSMUST00000095899 Rimbp3Q3V0F0 1606 aa10.59□□□□□ -0.71
Syne1-202ENSMUST00000095899 Rlbp1Q9Z275 317 aa10.59□□□□□ -0.71
Syne1-202ENSMUST00000095899 NinlQ6ZQ12 1394 aa10.59□□□□□ -0.71
Syne1-202ENSMUST00000095899 Lmtk3Q5XJV6 1424 aa10.59□□□□□ -0.71
Syne1-202ENSMUST00000095899 Arap3Q8R5G7 1538 aa10.58□□□□□ -0.72
Syne1-202ENSMUST00000095899 Neurod2Q62414 383 aa10.58□□□□□ -0.72
Syne1-202ENSMUST00000095899 Med1Q925J9 1575 aa10.58□□□□□ -0.72
Syne1-202ENSMUST00000095899 Shq1Q7TMX5 569 aa10.57□□□□□ -0.72
Syne1-202ENSMUST00000095899 Apaf1O88879 1249 aa10.57□□□□□ -0.72
Syne1-202ENSMUST00000095899 Hsp90aa1P07901 733 aaKnown RBP10.57□□□□□ -0.72
Syne1-202ENSMUST00000095899 IqubQ8CDK3 788 aa10.57□□□□□ -0.72
Syne1-202ENSMUST00000095899 Duxf3A0A0N4SV92 674 aa10.56□□□□□ -0.72
Syne1-202ENSMUST00000095899 Trim28Q62318 834 aa10.56□□□□□ -0.72
Syne1-202ENSMUST00000095899 Nlrp6Q91WS2 869 aa10.56□□□□□ -0.72
Syne1-202ENSMUST00000095899 Atp7bQ64446 1462 aa10.56□□□□□ -0.72
Syne1-202ENSMUST00000095899 Pik3r4Q8VD65 1358 aa10.56□□□□□ -0.72
Syne1-202ENSMUST00000095899 Q4VA45 678 aa10.56□□□□□ -0.72
Syne1-202ENSMUST00000095899 Stk26Q99JT2 416 aa10.55□□□□□ -0.72
Syne1-202ENSMUST00000095899 Map3k19E9Q3S4 1311 aa10.55□□□□□ -0.72
Syne1-202ENSMUST00000095899 Asxl2Q8BZ32 1370 aa10.55□□□□□ -0.72
Syne1-202ENSMUST00000095899 Ubr1O70481 1757 aa10.55□□□□□ -0.72
Syne1-202ENSMUST00000095899 Cdk19Q8BWD8 501 aa10.55□□□□□ -0.72
Syne1-202ENSMUST00000095899 Q9D9H8 365 aa10.55□□□□□ -0.72
Syne1-202ENSMUST00000095899 Pank1Q8K4K6 548 aa10.54□□□□□ -0.72
Syne1-202ENSMUST00000095899 PtpruB1AUH1 1446 aa10.54□□□□□ -0.72
Syne1-202ENSMUST00000095899 Scn4aQ9ER60 1841 aa10.54□□□□□ -0.72
Syne1-202ENSMUST00000095899 Safb2Q80YR5 991 aaKnown RBP10.54□□□□□ -0.72
Syne1-202ENSMUST00000095899 Ipo4Q8VI75 1082 aa10.54□□□□□ -0.72
Syne1-202ENSMUST00000095899 Ppp1r3fQ9JIG4 799 aa10.54□□□□□ -0.72
Syne1-202ENSMUST00000095899 Apbb1Q9QXJ1 710 aa10.54□□□□□ -0.72
Syne1-202ENSMUST00000095899 Ttc21aQ8C0S4 1314 aa10.53□□□□□ -0.72
Syne1-202ENSMUST00000095899 Gsto1O09131 240 aa10.53□□□□□ -0.72
Syne1-202ENSMUST00000095899 D430041D05RikF6ZGR6 1678 aa10.53□□□□□ -0.72
Syne1-202ENSMUST00000095899 Thsd7aQ69ZU6 1645 aa10.53□□□□□ -0.72
Syne1-202ENSMUST00000095899 NeflP08551 543 aa10.52□□□□□ -0.73
Syne1-202ENSMUST00000095899 Atp2b2Q9R0K7 1198 aa10.52□□□□□ -0.73
Syne1-202ENSMUST00000095899 Als2Q920R0 1651 aa10.52□□□□□ -0.73
Syne1-202ENSMUST00000095899 Map2P20357 1828 aa10.52□□□□□ -0.73
Syne1-202ENSMUST00000095899 Dusp27Q148W8 1138 aa10.52□□□□□ -0.73
Syne1-202ENSMUST00000095899 Tsen2Q6P7W5 460 aa10.52□□□□□ -0.73
Syne1-202ENSMUST00000095899 Scn7aB1AYL1 1681 aa10.52□□□□□ -0.73
Syne1-202ENSMUST00000095899 Pik3c2aQ61194 1686 aa10.51□□□□□ -0.73
Syne1-202ENSMUST00000095899 Prdm10Q3UTQ7 1184 aa10.51□□□□□ -0.73
Syne1-202ENSMUST00000095899 Ankrd50F7BE84 1390 aa10.51□□□□□ -0.73
Syne1-202ENSMUST00000095899 Trim58Q5NCC9 485 aa10.51□□□□□ -0.73
Syne1-202ENSMUST00000095899 B4galnt3Q6L8S8 986 aa10.51□□□□□ -0.73
Syne1-202ENSMUST00000095899 EspnQ9ET47 871 aa10.51□□□□□ -0.73
Syne1-202ENSMUST00000095899 Adgrb1Q3UHD1 1582 aa10.5□□□□□ -0.73
Syne1-202ENSMUST00000095899 Kif20bQ80WE4 1774 aaKnown RBP10.5□□□□□ -0.73
Syne1-202ENSMUST00000095899 Mon2Q80TL7 1715 aa10.5□□□□□ -0.73
Syne1-202ENSMUST00000095899 Iqcf3Q9D498 203 aa10.5□□□□□ -0.73
Syne1-202ENSMUST00000095899 C5P06684 1680 aa10.5□□□□□ -0.73
Syne1-202ENSMUST00000095899 ChgaP26339 463 aaKnown RBP10.49□□□□□ -0.73
Syne1-202ENSMUST00000095899 Slc12a5Q91V14 1138 aa10.49□□□□□ -0.73
Syne1-202ENSMUST00000095899 Uhrf1bp1lA2RSJ4 1457 aa10.49□□□□□ -0.73
Syne1-202ENSMUST00000095899 PtprvP70289 1705 aa10.49□□□□□ -0.73
Syne1-202ENSMUST00000095899 PaskQ8CEE6 1383 aa10.49□□□□□ -0.73
Syne1-202ENSMUST00000095899 Rims2Q9EQZ7 1530 aa10.49□□□□□ -0.73
Syne1-202ENSMUST00000095899 CastP51125 788 aa10.49□□□□□ -0.73
Syne1-202ENSMUST00000095899 Utp14aQ640M1 767 aaKnown RBP10.48□□□□□ -0.73
Syne1-202ENSMUST00000095899 U2af1Q9D883 239 aaKnown RBP10.48□□□□□ -0.73
Syne1-202ENSMUST00000095899 Exosc9Q9JHI7 438 aaKnown RBP10.48□□□□□ -0.73
Syne1-202ENSMUST00000095899 MlecQ6ZQI3 291 aaKnown RBP10.48□□□□□ -0.73
Syne1-202ENSMUST00000095899 Chmp5Q9D7S9 219 aa10.48□□□□□ -0.73
Syne1-202ENSMUST00000095899 Camta1A2A891 1682 aa10.48□□□□□ -0.73
Syne1-202ENSMUST00000095899 Mapk8ip3Q9ESN9 1337 aa10.47□□□□□ -0.73
Syne1-202ENSMUST00000095899 Tmc1Q8R4P5 757 aa10.47□□□□□ -0.73
Syne1-202ENSMUST00000095899 Dbr1Q923B1 550 aa10.47□□□□□ -0.73
Syne1-202ENSMUST00000095899 FanciQ8K368 1330 aa10.47□□□□□ -0.73
Syne1-202ENSMUST00000095899 Unc13bQ9Z1N9 1602 aa10.47□□□□□ -0.73
Syne1-202ENSMUST00000095899 NudcO35685 332 aaKnown RBP10.46□□□□□ -0.73
Syne1-202ENSMUST00000095899 AampJ3QN89 436 aa10.45□□□□□ -0.74
Syne1-202ENSMUST00000095899 Ksr2Q3UVC0 959 aa10.45□□□□□ -0.74
Syne1-202ENSMUST00000095899 Cavin4A2AMM0 362 aa10.45□□□□□ -0.74
Syne1-202ENSMUST00000095899 Pnmal2G3X9N3 661 aa10.45□□□□□ -0.74
Syne1-202ENSMUST00000095899 Slit2Q9R1B9 1521 aa10.45□□□□□ -0.74
Syne1-202ENSMUST00000095899 Col16a1Q8BLX7 1580 aa10.45□□□□□ -0.74
Syne1-202ENSMUST00000095899 Rreb1Q3UH06 1700 aaKnown RBP10.44□□□□□ -0.74
Syne1-202ENSMUST00000095899 PalmQ9Z0P4 383 aa10.44□□□□□ -0.74
Syne1-202ENSMUST00000095899 Nrxn3Q6P9K9 1571 aa10.44□□□□□ -0.74
Syne1-202ENSMUST00000095899 Fchsd2Q3USJ8 740 aa10.44□□□□□ -0.74
Syne1-202ENSMUST00000095899 Idi2Q8BFZ6 227 aa10.43□□□□□ -0.74
Syne1-202ENSMUST00000095899 Ciz1Q8VEH2 845 aa10.43□□□□□ -0.74
Syne1-202ENSMUST00000095899 Ltbp4Q8K4G1 1666 aa10.43□□□□□ -0.74
Syne1-202ENSMUST00000095899 PzpQ61838 1495 aa10.43□□□□□ -0.74
Syne1-202ENSMUST00000095899 GphnQ8BUV3 769 aaKnown RBP10.43□□□□□ -0.74
Syne1-202ENSMUST00000095899 Ccar1Q8CH18 1146 aaKnown RBP10.43□□□□□ -0.74
Syne1-202ENSMUST00000095899 Trpm3Q5F4S9 1721 aa10.43□□□□□ -0.74
Syne1-202ENSMUST00000095899 Ppp1r15aP17564 657 aa10.42□□□□□ -0.74
Syne1-202ENSMUST00000095899 MyclP10166 368 aa10.42□□□□□ -0.74
Syne1-202ENSMUST00000095899 Myo5bP21271 1818 aa10.42□□□□□ -0.74
Syne1-202ENSMUST00000095899 Abcc10Q8R4P9 1501 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 66.9 ms