RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Usp16Q99LG0 825 aa9.67□□□□□ -0.86
Spen-201ENSMUST00000078886 Ap3b2Q9JME5 1082 aa9.67□□□□□ -0.86
Spen-201ENSMUST00000078886 Sept11Q8C1B7 431 aaKnown RBP9.67□□□□□ -0.86
Spen-201ENSMUST00000078886 Psma5Q9Z2U1 241 aaKnown RBP9.67□□□□□ -0.86
Spen-201ENSMUST00000078886 Kif20aP97329 887 aa9.67□□□□□ -0.86
Spen-201ENSMUST00000078886 Tspyl3Q3UYP3 334 aa9.67□□□□□ -0.86
Spen-201ENSMUST00000078886 CenpqQ9CPQ5 267 aa9.67□□□□□ -0.86
Spen-201ENSMUST00000078886 Me1P06801 572 aa9.67□□□□□ -0.86
Spen-201ENSMUST00000078886 Nf2P46662 596 aa9.67□□□□□ -0.86
Spen-201ENSMUST00000078886 Ccdc39Q9D5Y1 937 aa9.67□□□□□ -0.86
Spen-201ENSMUST00000078886 Ppp1r18Q8BQ30 594 aa9.66□□□□□ -0.86
Spen-201ENSMUST00000078886 Gnai1B2RSH2 354 aa9.66□□□□□ -0.86
Spen-201ENSMUST00000078886 IqcgQ80W32 419 aa9.66□□□□□ -0.86
Spen-201ENSMUST00000078886 Luc7lQ9CYI4 371 aaKnown RBP9.66□□□□□ -0.86
Spen-201ENSMUST00000078886 Gnai3Q9DC51 354 aa9.66□□□□□ -0.86
Spen-201ENSMUST00000078886 Ggt6Q6PDE7 497 aa9.66□□□□□ -0.86
Spen-201ENSMUST00000078886 Nbr1P97432 988 aa9.66□□□□□ -0.86
Spen-201ENSMUST00000078886 Skor1Q8BX46 964 aa9.66□□□□□ -0.86
Spen-201ENSMUST00000078886 Rpgrip1lQ8CG73 1264 aa9.66□□□□□ -0.86
Spen-201ENSMUST00000078886 CrcpO35427 148 aa9.65□□□□□ -0.86
Spen-201ENSMUST00000078886 Babam1Q3UI43 333 aa9.65□□□□□ -0.86
Spen-201ENSMUST00000078886 Nutm1Q8BHP2 1126 aa9.65□□□□□ -0.86
Spen-201ENSMUST00000078886 Usp40Q8BWR4 1235 aa9.65□□□□□ -0.86
Spen-201ENSMUST00000078886 Trim25Q61510 634 aaKnown RBP9.65□□□□□ -0.86
Spen-201ENSMUST00000078886 StambpQ9CQ26 424 aa9.65□□□□□ -0.86
Spen-201ENSMUST00000078886 Ssh1Q76I79 1042 aa9.65□□□□□ -0.86
Spen-201ENSMUST00000078886 Tmem132aQ922P8 1018 aa9.65□□□□□ -0.86
Spen-201ENSMUST00000078886 Dhx16G3X8X0 1044 aaKnown RBP9.65□□□□□ -0.87
Spen-201ENSMUST00000078886 Smc1aQ9CU62 1233 aaKnown RBP9.65□□□□□ -0.87
Spen-201ENSMUST00000078886 Ccnb3Q810T2 1396 aa9.65□□□□□ -0.87
Spen-201ENSMUST00000078886 Zkscan2G3X952 960 aa9.64□□□□□ -0.87
Spen-201ENSMUST00000078886 Ercc3P49135 783 aa9.64□□□□□ -0.87
Spen-201ENSMUST00000078886 Stk38Q91VJ4 465 aa9.64□□□□□ -0.87
Spen-201ENSMUST00000078886 TnmdQ9EP64 317 aa9.64□□□□□ -0.87
Spen-201ENSMUST00000078886 NcapgE9PWG6 1004 aa9.64□□□□□ -0.87
Spen-201ENSMUST00000078886 Nectin2P32507 530 aa9.64□□□□□ -0.87
Spen-201ENSMUST00000078886 4921530L21RikQ9CQ47 274 aa9.64□□□□□ -0.87
Spen-201ENSMUST00000078886 Larp1Q6ZQ58 1072 aaKnown RBP9.64□□□□□ -0.87
Spen-201ENSMUST00000078886 Ppp4r3bQ922R5 820 aa9.64□□□□□ -0.87
Spen-201ENSMUST00000078886 Ssr1Q9CY50 286 aaKnown RBP9.64□□□□□ -0.87
Spen-201ENSMUST00000078886 Eif3j1Q3UGC7 261 aaKnown RBP9.64□□□□□ -0.87
Spen-201ENSMUST00000078886 Eif3j2Q66JS6 263 aa9.64□□□□□ -0.87
Spen-201ENSMUST00000078886 Swt1Q9DBQ9 907 aa9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 Stk3Q9JI10 497 aa9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 AknaQ80VW7 1404 aa9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 Pip4k2aO70172 405 aa9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 Cnnm3Q32NY4 713 aa9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 Rsph4aQ8BYM7 716 aa9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 Gnl2Q99LH1 728 aaKnown RBP9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 Eif5P59325 429 aaKnown RBP9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 Pafah1b1P63005 410 aaKnown RBP9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 Bbof1Q3V079 533 aa9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 Fam184aE9PW83 1143 aa9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 Cfdp1O88271 295 aaKnown RBP9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 Stk11ipQ3TAA7 1072 aa9.63□□□□□ -0.87
Spen-201ENSMUST00000078886 Jakmip3Q5DTN8 844 aa9.62□□□□□ -0.87
Spen-201ENSMUST00000078886 Chmp7Q8R1T1 451 aa9.62□□□□□ -0.87
Spen-201ENSMUST00000078886 4933428M09RikQ9D3X3 192 aa9.62□□□□□ -0.87
Spen-201ENSMUST00000078886 Sart1Q9Z315 806 aaKnown RBP9.62□□□□□ -0.87
Spen-201ENSMUST00000078886 NexnQ7TPW1 607 aa9.62□□□□□ -0.87
Spen-201ENSMUST00000078886 Vps37cQ8R105 352 aa9.62□□□□□ -0.87
Spen-201ENSMUST00000078886 ZfxP17012 799 aa9.62□□□□□ -0.87
Spen-201ENSMUST00000078886 Sv2bQ8BG39 683 aa9.62□□□□□ -0.87
Spen-201ENSMUST00000078886 Ccdc171E9Q1U1 1324 aa9.62□□□□□ -0.87
Spen-201ENSMUST00000078886 Fam107bQ3TGF2 131 aa9.62□□□□□ -0.87
Spen-201ENSMUST00000078886 Med4Q9CQA5 270 aa9.61□□□□□ -0.87
Spen-201ENSMUST00000078886 Sptbn5F6UCX4 1208 aa9.61□□□□□ -0.87
Spen-201ENSMUST00000078886 Rbm28Q8CGC6 750 aaKnown RBP9.61□□□□□ -0.87
Spen-201ENSMUST00000078886 Ankrd36D3Z4K0 1415 aa9.61□□□□□ -0.87
Spen-201ENSMUST00000078886 Smc1bQ920F6 1248 aa9.61□□□□□ -0.87
Spen-201ENSMUST00000078886 Sept7O55131 436 aa9.61□□□□□ -0.87
Spen-201ENSMUST00000078886 Ddx46Q569Z5 1032 aaKnown RBP9.61□□□□□ -0.87
Spen-201ENSMUST00000078886 PnisrA2AJT4 805 aaKnown RBP9.61□□□□□ -0.87
Spen-201ENSMUST00000078886 RalylQ8BTF8 293 aa9.61□□□□□ -0.87
Spen-201ENSMUST00000078886 UvssaQ9D479 717 aa9.61□□□□□ -0.87
Spen-201ENSMUST00000078886 Q9D9S1 216 aa9.61□□□□□ -0.87
Spen-201ENSMUST00000078886 Tango6Q8C3S2 1079 aa9.6□□□□□ -0.87
Spen-201ENSMUST00000078886 Rapgef2Q8CHG7 1496 aa9.6□□□□□ -0.87
Spen-201ENSMUST00000078886 Washc2Q6PGL7 1334 aa9.6□□□□□ -0.87
Spen-201ENSMUST00000078886 Krt85Q9Z2T6 507 aa9.6□□□□□ -0.87
Spen-201ENSMUST00000078886 Lrrcc1Q69ZB0 1026 aa9.6□□□□□ -0.87
Spen-201ENSMUST00000078886 Gcc1Q9D4H2 778 aa9.6□□□□□ -0.87
Spen-201ENSMUST00000078886 Jakmip2D3YXK0 820 aa9.6□□□□□ -0.87
Spen-201ENSMUST00000078886 Mink1Q9JM52 1308 aa9.6□□□□□ -0.87
Spen-201ENSMUST00000078886 Mctp1E9PV86 951 aa9.6□□□□□ -0.87
Spen-201ENSMUST00000078886 Gm10471E9Q1C7 252 aa9.6□□□□□ -0.87
Spen-201ENSMUST00000078886 Lrrc45Q8CIM1 670 aa9.6□□□□□ -0.87
Spen-201ENSMUST00000078886 Odf2lQ9D478 642 aa9.59□□□□□ -0.87
Spen-201ENSMUST00000078886 Tmc1Q8R4P5 757 aa9.59□□□□□ -0.87
Spen-201ENSMUST00000078886 Paip2Q9D6V8 124 aa9.59□□□□□ -0.87
Spen-201ENSMUST00000078886 Scaf1Q5U4C3 1256 aaKnown RBP9.59□□□□□ -0.87
Spen-201ENSMUST00000078886 Slu7Q8BHJ9 585 aa9.59□□□□□ -0.87
Spen-201ENSMUST00000078886 Prpf4bQ61136 1007 aaKnown RBP9.59□□□□□ -0.87
Spen-201ENSMUST00000078886 Usp35M0QWN7 1009 aa9.59□□□□□ -0.87
Spen-201ENSMUST00000078886 Fez2Q6TYB5 348 aa9.59□□□□□ -0.87
Spen-201ENSMUST00000078886 Zfp444Q3TDV8 331 aaKnown RBP9.59□□□□□ -0.87
Spen-201ENSMUST00000078886 Ccdc42Q5SV66 316 aa9.59□□□□□ -0.87
Spen-201ENSMUST00000078886 Kdm5dQ62240 1548 aa9.59□□□□□ -0.87
Spen-201ENSMUST00000078886 Dnaaf4Q8R368 420 aa9.59□□□□□ -0.87
Spen-201ENSMUST00000078886 Stim1P70302 685 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 70.7 ms