RNA–Protein interactions for RNA: ENSMUST00000071588.7

Nkx6-3-201, Transcript of Homeobox protein Nkx-6.3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx6-3, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3-201ENSMUST00000071588 Dip2bQ3UH60 1574 aa17.21■□□□□ 0.35
Nkx6-3-201ENSMUST00000071588 Psme1P97371 249 aa17.21■□□□□ 0.35
Nkx6-3-201ENSMUST00000071588 Fam43aQ8BUP8 424 aa17.21■□□□□ 0.35
Nkx6-3-201ENSMUST00000071588 Pank3Q8R2W9 370 aa17.21■□□□□ 0.35
Nkx6-3-201ENSMUST00000071588 IqubQ8CDK3 788 aa17.2■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Lekr1B2RVN1 116 aa17.2■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Rad21Q61550 635 aaKnown RBP17.2■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Itsn2Q9Z0R6 1659 aa17.19■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 PalldQ9ET54 1408 aa17.19■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Sptbn5F6UCX4 1208 aa17.19■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 DnmbpQ6TXD4 1580 aa17.19■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 4930407I10RikD3Z5T8 1512 aa17.19■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Sipa1l1Q8C0T5 1782 aa17.19■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Chd2E9PZM4 1827 aaKnown RBP17.18■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Arhgef28P97433 1693 aa17.18■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Tmf1B9EKI3 1091 aa17.17■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Zc3h13E9Q784 1729 aaKnown RBP17.17■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Kdm5aQ3UXZ9 1690 aa17.16■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Asxl2Q8BZ32 1370 aa17.16■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Dhx16G3X8X0 1044 aaKnown RBP17.16■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Pdia4P08003 638 aaKnown RBP17.16■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Dcaf11Q91VU6 549 aa17.16■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Inpp5dQ9ES52 1191 aa17.16■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Erbb4Q61527 1308 aa17.15■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Zscan10Q3URR7 782 aa17.15■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 Isy1Q69ZQ2 285 aaKnown RBP17.15■□□□□ 0.34
Nkx6-3-201ENSMUST00000071588 PplQ9R269 1755 aa17.14■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Rwdd1Q9CQK7 243 aa17.14■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 4930567H17RikQ3V0K5 233 aa17.13■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Utp14aQ640M1 767 aaKnown RBP17.13■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Ssh1Q76I79 1042 aa17.13■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Gemin5Q8BX17 1502 aaKnown RBP17.13■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Eif2ak4Q9QZ05 1648 aa17.12■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Slc4a1apE9PX68 744 aa17.12■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Gse1Q3U3C9 1213 aa17.12■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Gm16486A0A1D5RMD1 1434 aa17.11■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Tnpo1Q8BFY9 898 aaKnown RBP17.11■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Trim44Q9QXA7 346 aa17.11■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Tex14Q7M6U3 1450 aa17.11■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Ift172Q6VH22 1749 aa17.09■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 IghaA0A0A6YXW6 389 aa17.09■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Fam184bQ0KK56 942 aa17.09■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Dnajc14Q921R4 703 aa17.09■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Cep170bQ80U49 1574 aa17.09■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Kif16bB1AVY7 1312 aa17.09■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 CenpjQ569L8 1344 aa17.09■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Dip2aQ8BWT5 1523 aa17.08■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Bcl9Q9D219 1425 aa17.08■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 ArxO35085 564 aa17.08■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 GphnQ8BUV3 769 aaKnown RBP17.08■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Trim26Q99PN3 545 aa17.08■□□□□ 0.33
Nkx6-3-201ENSMUST00000071588 Tnnt2P50752 301 aa17.08■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 MaddQ80U28 1577 aa17.08■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Plekhh1Q80TI1 1356 aa17.07■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Mknk2Q8CDB0 459 aa17.06■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Cnga1P29974 684 aa17.06■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Rabep1O35551 862 aa17.05■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 VgfQ0VGU4 617 aa17.05■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Gys2Q8VCB3 704 aa17.05■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Catsper2A2ARP9 588 aa17.04■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 SlkO54988 1233 aa17.04■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Atp2b2Q9R0K7 1198 aa17.03■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Topaz1E5FYH1 1653 aa17.03■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Slit3Q9WVB4 1523 aa17.03■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Ppp2r1aQ76MZ3 589 aa17.02■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Pdcl2Q78Y63 240 aa17.02■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Plekhg1F6S200 1446 aa17.02■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Rab3gap2Q8BMG7 1366 aa17.02■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Esx1O88933 382 aa17.02■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 Ddit3P35639 168 aa17.02■□□□□ 0.32
Nkx6-3-201ENSMUST00000071588 InsrP15208 1372 aa17.01■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Tbc1d32Q3URV1 1296 aa17.01■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 PzpQ61838 1495 aa17.01■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Exosc9Q9JHI7 438 aaKnown RBP17■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Tspyl2Q7TQI8 677 aa16.98■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 HnrnpmQ9D0E1 729 aaKnown RBP16.98■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Apbb1Q9QXJ1 710 aa16.98■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Ythdc1E9Q5K9 736 aaKnown RBP16.97■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Terf2O35144 541 aa16.97■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 CrbnQ8C7D2 445 aa16.97■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Atf7ipQ7TT18 1306 aa16.97■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Abca14E9Q8F8 1683 aa16.97■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Prdm10Q3UTQ7 1184 aa16.97■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Zranb1Q7M760 708 aa16.97■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Fbxo2Q80UW2 297 aa16.97■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Cdk19Q8BWD8 501 aa16.96■□□□□ 0.31
Nkx6-3-201ENSMUST00000071588 Tshz2Q68FE9 1030 aa16.96■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 Ppp2r3aB2RXC8 1150 aa16.95■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 Kif7B7ZNG0 1348 aa16.95■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 Gsto1O09131 240 aa16.95■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 Znf521Q6KAS7 1311 aa16.95■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 KarsQ99MN1 595 aaKnown RBP16.95■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 Brwd3A2AHJ4 1799 aa16.94■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 Pik3r4Q8VD65 1358 aa16.94■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 Plcb2A3KGF7 1181 aa16.94■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 Nwd1A6H603 1563 aa16.93■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 Scaf11E9PZM7 1456 aaKnown RBP16.93■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 Kiaa0753Q6A000 959 aa16.93■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 Ush1cQ9ES64 910 aa16.93■□□□□ 0.3
Nkx6-3-201ENSMUST00000071588 Cps1Q8C196 1500 aa16.93■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms