RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Slc24a1Q91WD8 1130 aa15.91■□□□□ 0.14
Upk3b-201ENSMUST00000062606 Sipa1l2Q80TE4 1722 aa15.9■□□□□ 0.14
Upk3b-201ENSMUST00000062606 Plekhg5Q66T02 1073 aa15.9■□□□□ 0.14
Upk3b-201ENSMUST00000062606 Brd2Q7JJ13 798 aaKnown RBP15.9■□□□□ 0.14
Upk3b-201ENSMUST00000062606 Liat1Q810M6 228 aa15.9■□□□□ 0.14
Upk3b-201ENSMUST00000062606 Card11Q8CIS0 1159 aa15.9■□□□□ 0.14
Upk3b-201ENSMUST00000062606 Abcc10Q8R4P9 1501 aa15.89■□□□□ 0.14
Upk3b-201ENSMUST00000062606 Pik3c2aQ61194 1686 aa15.89■□□□□ 0.13
Upk3b-201ENSMUST00000062606 AU015836B2RUM3 263 aa15.89■□□□□ 0.13
Upk3b-201ENSMUST00000062606 Q9D9H8 365 aa15.89■□□□□ 0.13
Upk3b-201ENSMUST00000062606 Fan1Q69ZT1 1020 aa15.89■□□□□ 0.13
Upk3b-201ENSMUST00000062606 PtpruB1AUH1 1446 aa15.88■□□□□ 0.13
Upk3b-201ENSMUST00000062606 Slc4a1apE9PX68 744 aa15.88■□□□□ 0.13
Upk3b-201ENSMUST00000062606 Grwd1Q810D6 446 aaKnown RBP15.88■□□□□ 0.13
Upk3b-201ENSMUST00000062606 Usp40Q8BWR4 1235 aa15.88■□□□□ 0.13
Upk3b-201ENSMUST00000062606 Ipo9Q91YE6 1041 aa15.87■□□□□ 0.13
Upk3b-201ENSMUST00000062606 Srcin1Q9QWI6 1250 aa15.87■□□□□ 0.13
Upk3b-201ENSMUST00000062606 Iqcf3Q9D498 203 aa15.86■□□□□ 0.13
Upk3b-201ENSMUST00000062606 IqubQ8CDK3 788 aa15.86■□□□□ 0.13
Upk3b-201ENSMUST00000062606 Gtf2e1Q9D0D5 440 aa15.85■□□□□ 0.13
Upk3b-201ENSMUST00000062606 CenpjQ569L8 1344 aa15.85■□□□□ 0.13
Upk3b-201ENSMUST00000062606 KdrP35918 1367 aa15.85■□□□□ 0.13
Upk3b-201ENSMUST00000062606 Asxl2Q8BZ32 1370 aa15.84■□□□□ 0.13
Upk3b-201ENSMUST00000062606 Kiaa1211Q5PR69 1207 aa15.83■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Znf335A2A5K6 1337 aa15.82■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Dusp27Q148W8 1138 aa15.82■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Trim26Q99PN3 545 aa15.81■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Dhx30Q99PU8 1217 aaKnown RBP15.81■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Scn7aB1AYL1 1681 aa15.8■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Kdm2aP59997 1161 aa15.8■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Abca15E9PWH4 1668 aa15.8■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Sin3aQ60520 1274 aaKnown RBP15.79■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Utp14aQ640M1 767 aaKnown RBP15.78■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Arid4aF8VPQ2 1261 aaKnown RBP15.78■□□□□ 0.12
Upk3b-201ENSMUST00000062606 P3h3Q8CG70 732 aa15.78■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Irx6Q9ER75 438 aa15.78■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Gprasp1Q5U4C1 1347 aa15.78■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Gm13695A2AK44 830 aa15.77■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Tmem132aQ922P8 1018 aa15.77■□□□□ 0.12
Upk3b-201ENSMUST00000062606 FanciQ8K368 1330 aa15.77■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Smg6P61406 1418 aaKnown RBP15.77■□□□□ 0.12
Upk3b-201ENSMUST00000062606 Tmem2Q5FWI3 1383 aa15.76■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Col16a1Q8BLX7 1580 aa15.75■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Q3UJC8 639 aa15.75■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Bcl9lQ67FY2 1494 aa15.75■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Zmym3Q9JLM4 1370 aa15.75■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Fam135bQ9DAI6 1403 aa15.74■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Siglec1Q62230 1695 aa15.74■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Nom1Q3UFM5 854 aaKnown RBP15.74■□□□□ 0.11
Upk3b-201ENSMUST00000062606 HnrnpmQ9D0E1 729 aaKnown RBP15.74■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Atp7bQ64446 1462 aa15.74■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Stag3O70576 1240 aa15.73■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Kcna4Q61423 654 aa15.73■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Tet3Q8BG87 1668 aa15.73■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Atp2b2Q9R0K7 1198 aa15.72■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Zfp142G5E869 1843 aa15.72■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Ubr1O70481 1757 aa15.72■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Robo1O89026 1612 aa15.71■□□□□ 0.11
Upk3b-201ENSMUST00000062606 Irf5P56477 497 aa15.7■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Idi2Q8BFZ6 227 aa15.7■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Amigo3Q8C2S7 508 aa15.69■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Slain2Q8CI08 581 aa15.69■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Gsto1O09131 240 aa15.69■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Os9Q8K2C7 672 aa15.69■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Atp1b4Q99ME6 356 aa15.69■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Brinp3Q499E0 766 aa15.69■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Tmem94Q7TSH8 1360 aa15.68■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Kcna6Q61923 529 aa15.68■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Gtf3c6Q9D8P7 227 aa15.67■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Atp10bB1AWN4 1474 aa15.67■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Cdk19Q8BWD8 501 aa15.66■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Skap1Q3UUV5 355 aa15.65■□□□□ 0.1
Upk3b-201ENSMUST00000062606 CemipQ8BI06 1361 aa15.65■□□□□ 0.1
Upk3b-201ENSMUST00000062606 Slc4a3P16283 1227 aa15.65■□□□□ 0.1
Upk3b-201ENSMUST00000062606 4930567H17RikQ3V0K5 233 aa15.64■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Tex2Q6ZPJ0 1128 aaKnown RBP15.64■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Stk26Q99JT2 416 aa15.64■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Tnnt2P50752 301 aa15.64■□□□□ 0.09
Upk3b-201ENSMUST00000062606 PrxO55103 1391 aa15.64■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Map3k19E9Q3S4 1311 aa15.64■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Spef2Q8C9J3 1734 aa15.63■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Gm10563F6WIE4 79 aa15.62■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Pip4k2bQ80XI4 416 aa15.62■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Dnajc14Q921R4 703 aa15.62■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Astn2Q80Z10 1352 aa15.62■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Speer4f1Q9D5Q6 258 aa15.61■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Cdk12Q14AX6 1484 aaKnown RBP15.6■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Map2P20357 1828 aa15.6■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Mink1Q9JM52 1308 aa15.6■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Phf23Q8BSN5 401 aa15.6■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Chd4Q6PDQ2 1915 aaKnown RBP15.59■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Tmf1B9EKI3 1091 aa15.59■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Rad17Q6NXW6 688 aa15.59■□□□□ 0.09
Upk3b-201ENSMUST00000062606 Tcerg1Q8CGF7 1100 aaKnown RBP15.58■□□□□ 0.08
Upk3b-201ENSMUST00000062606 PtprvP70289 1705 aa15.58■□□□□ 0.08
Upk3b-201ENSMUST00000062606 Fam184bQ0KK56 942 aa15.58■□□□□ 0.08
Upk3b-201ENSMUST00000062606 Ppp6r1Q7TSI3 856 aa15.57■□□□□ 0.08
Upk3b-201ENSMUST00000062606 Nfat5Q9WV30 1534 aa15.57■□□□□ 0.08
Upk3b-201ENSMUST00000062606 Hoxb7P09024 217 aa15.56■□□□□ 0.08
Upk3b-201ENSMUST00000062606 Idi1P58044 227 aa15.56■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms