RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Acsbg1Q99PU5 721 aa25.49■■□□□ 1.67
Vti1b-201ENSMUST00000055262 PtprvP70289 1705 aa25.49■■□□□ 1.67
Vti1b-201ENSMUST00000055262 Slc4a1apE9PX68 744 aa25.47■■□□□ 1.67
Vti1b-201ENSMUST00000055262 GapdhsQ64467 440 aa25.47■■□□□ 1.67
Vti1b-201ENSMUST00000055262 Lrp6O88572 1613 aa25.47■■□□□ 1.67
Vti1b-201ENSMUST00000055262 Siglec1Q62230 1695 aa25.46■■□□□ 1.67
Vti1b-201ENSMUST00000055262 Abca15E9PWH4 1668 aa25.46■■□□□ 1.67
Vti1b-201ENSMUST00000055262 Frmpd2A0A140LI67 1392 aa25.46■■□□□ 1.67
Vti1b-201ENSMUST00000055262 PrxO55103 1391 aa25.46■■□□□ 1.67
Vti1b-201ENSMUST00000055262 MypopQ8R4U1 393 aa25.46■■□□□ 1.67
Vti1b-201ENSMUST00000055262 TimelessQ9R1X4 1197 aa25.46■■□□□ 1.67
Vti1b-201ENSMUST00000055262 Tmf1B9EKI3 1091 aa25.45■■□□□ 1.66
Vti1b-201ENSMUST00000055262 Fam184bQ0KK56 942 aa25.44■■□□□ 1.66
Vti1b-201ENSMUST00000055262 Znf335A2A5K6 1337 aa25.44■■□□□ 1.66
Vti1b-201ENSMUST00000055262 Arhgef1Q61210 920 aaKnown RBP25.43■■□□□ 1.66
Vti1b-201ENSMUST00000055262 Ddx54Q8K4L0 874 aaKnown RBP25.43■■□□□ 1.66
Vti1b-201ENSMUST00000055262 Pank3Q8R2W9 370 aa25.41■■□□□ 1.66
Vti1b-201ENSMUST00000055262 Tex14Q7M6U3 1450 aa25.41■■□□□ 1.66
Vti1b-201ENSMUST00000055262 Kif16bB1AVY7 1312 aa25.41■■□□□ 1.66
Vti1b-201ENSMUST00000055262 PaskQ8CEE6 1383 aa25.39■■□□□ 1.66
Vti1b-201ENSMUST00000055262 Lrrc59Q922Q8 307 aaKnown RBP25.39■■□□□ 1.65
Vti1b-201ENSMUST00000055262 NinlQ6ZQ12 1394 aa25.38■■□□□ 1.65
Vti1b-201ENSMUST00000055262 Col16a1Q8BLX7 1580 aa25.38■■□□□ 1.65
Vti1b-201ENSMUST00000055262 Dzip1Q8BMD2 852 aa25.38■■□□□ 1.65
Vti1b-201ENSMUST00000055262 Dmrt2Q8BG36 561 aa25.36■■□□□ 1.65
Vti1b-201ENSMUST00000055262 Emilin2Q8K482 1074 aa25.36■■□□□ 1.65
Vti1b-201ENSMUST00000055262 Zmym3Q9JLM4 1370 aa25.35■■□□□ 1.65
Vti1b-201ENSMUST00000055262 Prdm10Q3UTQ7 1184 aa25.34■■□□□ 1.65
Vti1b-201ENSMUST00000055262 Gimap6Q8K349 305 aa25.34■■□□□ 1.65
Vti1b-201ENSMUST00000055262 Tet3Q8BG87 1668 aa25.34■■□□□ 1.65
Vti1b-201ENSMUST00000055262 Inpp5dQ9ES52 1191 aa25.34■■□□□ 1.65
Vti1b-201ENSMUST00000055262 Cdhr2E9Q7P9 1308 aa25.32■■□□□ 1.64
Vti1b-201ENSMUST00000055262 Bcl9lQ67FY2 1494 aa25.32■■□□□ 1.64
Vti1b-201ENSMUST00000055262 Zscan10Q3URR7 782 aa25.3■■□□□ 1.64
Vti1b-201ENSMUST00000055262 ZgpatQ8VDM1 511 aa25.3■■□□□ 1.64
Vti1b-201ENSMUST00000055262 Nid2O88322 1403 aa25.3■■□□□ 1.64
Vti1b-201ENSMUST00000055262 Gm21190A0A0G2JGJ6 266 aa25.29■■□□□ 1.64
Vti1b-201ENSMUST00000055262 Txnrd1Q9JMH6 613 aa25.29■■□□□ 1.64
Vti1b-201ENSMUST00000055262 Astn2Q80Z10 1352 aa25.29■■□□□ 1.64
Vti1b-201ENSMUST00000055262 Dennd6aQ8BH65 605 aa25.28■■□□□ 1.64
Vti1b-201ENSMUST00000055262 Ncoa4Q5U4H9 625 aa25.27■■□□□ 1.64
Vti1b-201ENSMUST00000055262 Nfat5Q9WV30 1534 aa25.27■■□□□ 1.64
Vti1b-201ENSMUST00000055262 Ncapd2Q8K2Z4 1392 aa25.26■■□□□ 1.63
Vti1b-201ENSMUST00000055262 Kif7B7ZNG0 1348 aa25.26■■□□□ 1.63
Vti1b-201ENSMUST00000055262 HdgfP51859 237 aaKnown RBP25.26■■□□□ 1.63
Vti1b-201ENSMUST00000055262 Gprasp1Q5U4C1 1347 aa25.24■■□□□ 1.63
Vti1b-201ENSMUST00000055262 Gm21698A0A087WQP8 267 aa25.24■■□□□ 1.63
Vti1b-201ENSMUST00000055262 Gm21671G3UY31 267 aa25.24■■□□□ 1.63
Vti1b-201ENSMUST00000055262 Nlgn1Q99K10 843 aa25.23■■□□□ 1.63
Vti1b-201ENSMUST00000055262 Eno4Q8C042 619 aa25.22■■□□□ 1.63
Vti1b-201ENSMUST00000055262 Nckap5lQ6GQX2 1323 aa25.21■■□□□ 1.63
Vti1b-201ENSMUST00000055262 Dcaf11Q91VU6 549 aa25.21■■□□□ 1.63
Vti1b-201ENSMUST00000055262 Cdk12Q14AX6 1484 aaKnown RBP25.2■■□□□ 1.63
Vti1b-201ENSMUST00000055262 Rtl5Q5DTT4 599 aa25.2■■□□□ 1.62
Vti1b-201ENSMUST00000055262 Chd4Q6PDQ2 1915 aaKnown RBP25.19■■□□□ 1.62
Vti1b-201ENSMUST00000055262 Cabp4Q8VHC5 271 aa25.18■■□□□ 1.62
Vti1b-201ENSMUST00000055262 Smg6P61406 1418 aaKnown RBP25.17■■□□□ 1.62
Vti1b-201ENSMUST00000055262 Kcnh5Q920E3 988 aa25.17■■□□□ 1.62
Vti1b-201ENSMUST00000055262 Psrc1Q9D0P7 329 aa25.17■■□□□ 1.62
Vti1b-201ENSMUST00000055262 Sall2Q9QX96 1004 aa25.17■■□□□ 1.62
Vti1b-201ENSMUST00000055262 InhbeO08717 350 aa25.16■■□□□ 1.62
Vti1b-201ENSMUST00000055262 Mdc1Q5PSV9 1707 aa25.14■■□□□ 1.62
Vti1b-201ENSMUST00000055262 CemipQ8BI06 1361 aa25.14■■□□□ 1.61
Vti1b-201ENSMUST00000055262 TnrQ8BYI9 1358 aa25.14■■□□□ 1.61
Vti1b-201ENSMUST00000055262 Ubr1O70481 1757 aa25.13■■□□□ 1.61
Vti1b-201ENSMUST00000055262 FancaQ9JL70 1439 aa25.12■■□□□ 1.61
Vti1b-201ENSMUST00000055262 Scaf1Q5U4C3 1256 aaKnown RBP25.12■■□□□ 1.61
Vti1b-201ENSMUST00000055262 Dnajc10Q9DC23 793 aa25.12■■□□□ 1.61
Vti1b-201ENSMUST00000055262 Scn7aB1AYL1 1681 aa25.12■■□□□ 1.61
Vti1b-201ENSMUST00000055262 IbtkQ6ZPR6 1352 aaKnown RBP25.11■■□□□ 1.61
Vti1b-201ENSMUST00000055262 TatQ8QZR1 454 aa25.11■■□□□ 1.61
Vti1b-201ENSMUST00000055262 Shank2Q80Z38 1476 aa25.11■■□□□ 1.61
Vti1b-201ENSMUST00000055262 Fmnl2A2APV2 1086 aa25.1■■□□□ 1.61
Vti1b-201ENSMUST00000055262 Card10P58660 1021 aa25.09■■□□□ 1.61
Vti1b-201ENSMUST00000055262 Pard3Q99NH2 1333 aa25.09■■□□□ 1.61
Vti1b-201ENSMUST00000055262 Sf3b2Q3UJB0 878 aaKnown RBP25.09■■□□□ 1.61
Vti1b-201ENSMUST00000055262 Birc3O08863 600 aa25.08■■□□□ 1.6
Vti1b-201ENSMUST00000055262 Ano8Q6PB70 1060 aa25.07■■□□□ 1.6
Vti1b-201ENSMUST00000055262 Tnrc6cQ3UHC0 1690 aaKnown RBP25.06■■□□□ 1.6
Vti1b-201ENSMUST00000055262 Amotl2Q8K371 772 aa25.06■■□□□ 1.6
Vti1b-201ENSMUST00000055262 Robo1O89026 1612 aa25.05■■□□□ 1.6
Vti1b-201ENSMUST00000055262 Sgsm1Q8BPQ7 1093 aa25.05■■□□□ 1.6
Vti1b-201ENSMUST00000055262 Hoxb7P09024 217 aa25.04■■□□□ 1.6
Vti1b-201ENSMUST00000055262 Slx1bQ8BX32 270 aa25.04■■□□□ 1.6
Vti1b-201ENSMUST00000055262 Map2P20357 1828 aa25.01■■□□□ 1.59
Vti1b-201ENSMUST00000055262 Ccdc129Q14B48 1034 aa25.01■■□□□ 1.59
Vti1b-201ENSMUST00000055262 Tmem132eQ6IEE6 982 aa25■■□□□ 1.59
Vti1b-201ENSMUST00000055262 Nol11Q8BJW5 723 aaKnown RBP25■■□□□ 1.59
Vti1b-201ENSMUST00000055262 Anp32bQ9EST5 272 aaKnown RBP25■■□□□ 1.59
Vti1b-201ENSMUST00000055262 Zeb2Q9R0G7 1215 aa24.98■■□□□ 1.59
Vti1b-201ENSMUST00000055262 Cald1E9QA15 768 aaKnown RBP24.97■■□□□ 1.59
Vti1b-201ENSMUST00000055262 Supt5hO55201 1082 aaKnown RBP24.97■■□□□ 1.59
Vti1b-201ENSMUST00000055262 Ltbp1Q8CG19 1712 aa24.97■■□□□ 1.59
Vti1b-201ENSMUST00000055262 Rab3gap2Q8BMG7 1366 aa24.97■■□□□ 1.59
Vti1b-201ENSMUST00000055262 MpndQ3TV65 487 aa24.96■■□□□ 1.59
Vti1b-201ENSMUST00000055262 Ppp2r1aQ76MZ3 589 aa24.95■■□□□ 1.58
Vti1b-201ENSMUST00000055262 Hoxc9P09633 260 aa24.94■■□□□ 1.58
Vti1b-201ENSMUST00000055262 RgmbQ7TQ33 436 aa24.94■■□□□ 1.58
Vti1b-201ENSMUST00000055262 Cacna1sQ02789 1880 aa24.93■■□□□ 1.58
Vti1b-201ENSMUST00000055262 OptnQ8K3K8 584 aa24.91■■□□□ 1.58
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms