RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 AtripQ8BMG1 785 aa8.47□□□□□ -1.05
Smc1a-201ENSMUST00000045312 Ubxn4Q8VCH8 506 aa8.47□□□□□ -1.05
Smc1a-201ENSMUST00000045312 Fez2Q6TYB5 348 aa8.47□□□□□ -1.05
Smc1a-201ENSMUST00000045312 Il4rP16382 810 aa8.47□□□□□ -1.05
Smc1a-201ENSMUST00000045312 Hvcn1Q3U2S8 269 aa8.47□□□□□ -1.05
Smc1a-201ENSMUST00000045312 Atp2b2Q9R0K7 1198 aa8.47□□□□□ -1.05
Smc1a-201ENSMUST00000045312 NefhP19246 1090 aa8.46□□□□□ -1.05
Smc1a-201ENSMUST00000045312 Ankrd26Q811D2 1581 aa8.46□□□□□ -1.05
Smc1a-201ENSMUST00000045312 Mlh3A0A1Y7VMP7 1443 aa8.46□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Naip2Q9QUK4 1447 aa8.46□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Trim30cD3YVI9 513 aa8.46□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Ttll5Q8CHB8 1328 aa8.46□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Gcom1E9PZ54 550 aa8.46□□□□□ -1.06
Smc1a-201ENSMUST00000045312 MyzapQ3UIJ9 466 aa8.46□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Clcn1Q64347 994 aa8.46□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Tpm4Q6IRU2 248 aa8.46□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Caskin1Q6P9K8 1431 aa8.46□□□□□ -1.06
Smc1a-201ENSMUST00000045312 4931400O07RikQ9D4M5 137 aa8.45□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Ccdc83Q9D4V3 305 aa8.45□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Ap3b2Q9JME5 1082 aa8.45□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Rec8Q8C5S7 591 aa8.45□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Rfx7F8VPJ6 1459 aa8.45□□□□□ -1.06
Smc1a-201ENSMUST00000045312 ImpactO55091 318 aa8.45□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Mex3cQ05A36 652 aaKnown RBP8.45□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Rbm27Q5SFM8 1060 aaKnown RBP8.45□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Samm50Q8BGH2 469 aa8.45□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Gpatch3Q8BIY1 525 aa8.45□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Hmox1P14901 289 aa8.45□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Nkx1-2P42580 305 aa8.45□□□□□ -1.06
Smc1a-201ENSMUST00000045312 A2mQ6GQT1 1474 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Lekr1B2RVN1 116 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Terf2O35144 541 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Cnnm3Q32NY4 713 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Chaf1aQ9QWF0 911 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Sox12Q04890 314 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 OptnQ8K3K8 584 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Chmp3Q9CQ10 224 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Ipo7Q9EPL8 1038 aaKnown RBP8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 NmiO35309 314 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 NexnQ7TPW1 607 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 TnmdQ9EP64 317 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 AppP12023 770 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Cpa2Q504N0 417 aa8.44□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Abcc5Q9R1X5 1436 aa8.43□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Serpinb6bO08804 377 aa8.43□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Kiaa0753Q6A000 959 aa8.43□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Ints3Q7TPD0 1041 aaKnown RBP8.43□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Gtpbp4Q99ME9 634 aaKnown RBP8.43□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Mctp1E9PV86 951 aa8.43□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Puf60Q3UEB3 564 aaKnown RBP8.43□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Rnf187Q8BFX1 236 aa8.43□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Bag4Q8CI61 457 aa8.43□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Pmfbp1Q9WVQ0 1022 aa8.43□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Ric3Q8BPM6 367 aa8.43□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Mcm3P25206 812 aaKnown RBP8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Adcy5P84309 1262 aa8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 ItpripQ3TNL8 555 aa8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Erich4Q3UNU4 136 aa8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Dnajc5bQ9CQ94 199 aa8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Catsper2A2ARP9 588 aa8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Trim25Q61510 634 aaKnown RBP8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Ppp2r1aQ76MZ3 589 aa8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Cchcr1Q8K2I2 770 aa8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Mink1Q9JM52 1308 aa8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Cyp46a1Q9WVK8 500 aa8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Srek1Q8BZX4 494 aaKnown RBP8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Gprasp1Q5U4C1 1347 aa8.42□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Gpatch8A2A6A1 1505 aa8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Rbm25B2RY56 838 aaKnown RBP8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Rasa1E9PYG6 1038 aa8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Map9Q3TRR0 646 aa8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 AnlnQ8K298 1121 aaKnown RBP8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Paxbp1P58501 919 aa8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Zfp251Q6PCX8 632 aa8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 FanciQ8K368 1330 aa8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Cplx1P63040 134 aa8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Kiaa1211Q5PR69 1207 aa8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Ccar2Q8VDP4 922 aaKnown RBP8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Tceal9Q9DD24 104 aa8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Dhx9O70133 1380 aaKnown RBP8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Gzf1Q4VBD9 706 aa8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Bag1Q60739 355 aa8.41□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Apaf1O88879 1249 aa8.4□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Ppip5k2Q6ZQB6 1129 aa8.4□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Disp1Q3TDN0 1521 aa8.4□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Plekhg5Q66T02 1073 aa8.4□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Jakmip1Q8BVL9 626 aa8.4□□□□□ -1.06
Smc1a-201ENSMUST00000045312 Med4Q9CQA5 270 aa8.4□□□□□ -1.06
Smc1a-201ENSMUST00000045312 A0A1L1SQF0 893 aa8.4□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Gsto1O09131 240 aa8.4□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Kif3cO35066 796 aa8.4□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Mcm2P97310 904 aa8.4□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Grpel1Q99LP6 217 aa8.4□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Stk31Q99MW1 1018 aa8.4□□□□□ -1.07
Smc1a-201ENSMUST00000045312 MicalclQ9D5U9 680 aa8.4□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Dctn1O08788 1281 aa8.39□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Q4VA45 678 aa8.39□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Rnf20Q5DTM8 973 aa8.39□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Ciz1Q8VEH2 845 aa8.39□□□□□ -1.07
Smc1a-201ENSMUST00000045312 Trap1aP19473 224 aa8.39□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms