RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Usp19Q3UJD6 1360 aa28.89■■■□□ 2.22
Ptx3-201ENSMUST00000029421 CrbnQ8C7D2 445 aa28.88■■■□□ 2.21
Ptx3-201ENSMUST00000029421 Golga2Q921M4 999 aa28.87■■■□□ 2.21
Ptx3-201ENSMUST00000029421 Plekhh1Q80TI1 1356 aa28.86■■■□□ 2.21
Ptx3-201ENSMUST00000029421 CatipB9EKE5 520 aa28.86■■■□□ 2.21
Ptx3-201ENSMUST00000029421 Rimbp3Q3V0F0 1606 aa28.86■■■□□ 2.21
Ptx3-201ENSMUST00000029421 D430041D05RikF6ZGR6 1678 aa28.86■■■□□ 2.21
Ptx3-201ENSMUST00000029421 Kif16bB1AVY7 1312 aa28.86■■■□□ 2.21
Ptx3-201ENSMUST00000029421 Kif20bQ80WE4 1774 aaKnown RBP28.85■■■□□ 2.21
Ptx3-201ENSMUST00000029421 N4bp2F8VQG7 1678 aaKnown RBP28.83■■■□□ 2.21
Ptx3-201ENSMUST00000029421 Map4k4P97820 1233 aaKnown RBP28.83■■■□□ 2.2
Ptx3-201ENSMUST00000029421 Rwdd1Q9CQK7 243 aa28.8■■■□□ 2.2
Ptx3-201ENSMUST00000029421 Uspl1Q3ULM6 1089 aa28.8■■■□□ 2.2
Ptx3-201ENSMUST00000029421 Rims2Q9EQZ7 1530 aa28.79■■■□□ 2.2
Ptx3-201ENSMUST00000029421 C5P06684 1680 aa28.78■■■□□ 2.2
Ptx3-201ENSMUST00000029421 Als2Q920R0 1651 aa28.77■■■□□ 2.2
Ptx3-201ENSMUST00000029421 Tsen2Q6P7W5 460 aa28.76■■■□□ 2.2
Ptx3-201ENSMUST00000029421 Kif1aP33173 1695 aa28.76■■■□□ 2.2
Ptx3-201ENSMUST00000029421 Med1Q925J9 1575 aa28.76■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Ttll13A4Q9F6 804 aa28.75■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Hsp90aa1P07901 733 aaKnown RBP28.75■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Speer4f1Q9D5Q6 258 aa28.75■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Gm10563F6WIE4 79 aa28.74■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Abcc10Q8R4P9 1501 aa28.73■■■□□ 2.19
Ptx3-201ENSMUST00000029421 U2af1Q9D883 239 aaKnown RBP28.73■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Thsd7aQ69ZU6 1645 aa28.73■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Znf335A2A5K6 1337 aa28.73■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Kdm2bQ6P1G2 1309 aa28.73■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Trim28Q62318 834 aa28.72■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Tmem94Q7TSH8 1360 aa28.72■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Iqsec2Q5DU25 1478 aa28.72■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Idi1P58044 227 aa28.71■■■□□ 2.19
Ptx3-201ENSMUST00000029421 EspnQ9ET47 871 aa28.7■■■□□ 2.19
Ptx3-201ENSMUST00000029421 Mon2Q80TL7 1715 aa28.69■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Mapk8ip3Q9ESN9 1337 aa28.68■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Birc3O08863 600 aa28.68■■■□□ 2.18
Ptx3-201ENSMUST00000029421 NgefQ8CHT1 710 aa28.68■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Iqcf3Q9D498 203 aa28.68■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Phlpp1Q8CHE4 1687 aa28.67■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Tns3Q5SSZ5 1440 aa28.67■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Ralbp1Q62172 648 aa28.67■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Chd4Q6PDQ2 1915 aaKnown RBP28.67■■■□□ 2.18
Ptx3-201ENSMUST00000029421 AampJ3QN89 436 aa28.66■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Hoxb7P09024 217 aa28.66■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Neurod2Q62414 383 aa28.66■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Ccdc30Q8BVF4 654 aa28.66■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Astn2Q80Z10 1352 aa28.65■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Nrxn3Q6P9K9 1571 aa28.65■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Slc12a5Q91V14 1138 aa28.64■■■□□ 2.18
Ptx3-201ENSMUST00000029421 Sox12Q04890 314 aa28.63■■■□□ 2.17
Ptx3-201ENSMUST00000029421 C3P01027 1663 aa28.63■■■□□ 2.17
Ptx3-201ENSMUST00000029421 NalcnQ8BXR5 1738 aa28.62■■■□□ 2.17
Ptx3-201ENSMUST00000029421 Apaf1O88879 1249 aa28.62■■■□□ 2.17
Ptx3-201ENSMUST00000029421 Ppp1r15aP17564 657 aa28.62■■■□□ 2.17
Ptx3-201ENSMUST00000029421 Col14a1Q80X19 1797 aa28.61■■■□□ 2.17
Ptx3-201ENSMUST00000029421 Ncbp3Q8BZR9 615 aaKnown RBP28.59■■■□□ 2.17
Ptx3-201ENSMUST00000029421 Ap3b2Q9JME5 1082 aa28.59■■■□□ 2.17
Ptx3-201ENSMUST00000029421 Unc13bQ9Z1N9 1602 aa28.57■■■□□ 2.16
Ptx3-201ENSMUST00000029421 Pik3c2aQ61194 1686 aa28.56■■■□□ 2.16
Ptx3-201ENSMUST00000029421 CemipQ8BI06 1361 aa28.56■■■□□ 2.16
Ptx3-201ENSMUST00000029421 Ppm1gQ61074 542 aa28.55■■■□□ 2.16
Ptx3-201ENSMUST00000029421 Chmp5Q9D7S9 219 aa28.55■■■□□ 2.16
Ptx3-201ENSMUST00000029421 Smc5Q8CG46 1101 aaKnown RBP28.54■■■□□ 2.16
Ptx3-201ENSMUST00000029421 PalmQ9Z0P4 383 aa28.54■■■□□ 2.16
Ptx3-201ENSMUST00000029421 Znf541Q0GGX2 1363 aa28.54■■■□□ 2.16
Ptx3-201ENSMUST00000029421 Fchsd2Q3USJ8 740 aa28.53■■■□□ 2.16
Ptx3-201ENSMUST00000029421 Col16a1Q8BLX7 1580 aa28.53■■■□□ 2.16
Ptx3-201ENSMUST00000029421 Nkx1-2P42580 305 aa28.53■■■□□ 2.16
Ptx3-201ENSMUST00000029421 Uhrf1bp1lA2RSJ4 1457 aa28.53■■■□□ 2.16
Ptx3-201ENSMUST00000029421 Cdk12Q14AX6 1484 aaKnown RBP28.52■■■□□ 2.16
Ptx3-201ENSMUST00000029421 Mdc1Q5PSV9 1707 aa28.51■■■□□ 2.16
Ptx3-201ENSMUST00000029421 Tmc1Q8R4P5 757 aa28.51■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Sipa1l2Q80TE4 1722 aa28.51■■■□□ 2.15
Ptx3-201ENSMUST00000029421 NudcO35685 332 aaKnown RBP28.51■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Atxn3Q9CVD2 355 aa28.49■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Brwd3A2AHJ4 1799 aa28.49■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Mre11Q61216 706 aa28.49■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Rsph6aQ8CDR2 708 aa28.49■■■□□ 2.15
Ptx3-201ENSMUST00000029421 ChgaP26339 463 aaKnown RBP28.48■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Ubr1O70481 1757 aa28.48■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Frmpd2A0A140LI67 1392 aa28.48■■■□□ 2.15
Ptx3-201ENSMUST00000029421 CanxP35564 591 aaKnown RBP28.47■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Dusp27Q148W8 1138 aa28.47■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Ciz1Q8VEH2 845 aa28.47■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Gas2l2Q5SSG4 860 aa28.46■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Tmem2Q5FWI3 1383 aa28.46■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Q4VA45 678 aa28.46■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Dnai1Q8C0M8 701 aa28.46■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Fam135bQ9DAI6 1403 aa28.46■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Cavin4A2AMM0 362 aa28.45■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Dennd6aQ8BH65 605 aa28.45■■■□□ 2.15
Ptx3-201ENSMUST00000029421 Uhrf1bp1B2KF50 1429 aa28.44■■■□□ 2.14
Ptx3-201ENSMUST00000029421 Scn4aQ9ER60 1841 aa28.43■■■□□ 2.14
Ptx3-201ENSMUST00000029421 Slain2Q8CI08 581 aa28.43■■■□□ 2.14
Ptx3-201ENSMUST00000029421 Nlgn1Q99K10 843 aa28.43■■■□□ 2.14
Ptx3-201ENSMUST00000029421 Spef2Q8C9J3 1734 aa28.42■■■□□ 2.14
Ptx3-201ENSMUST00000029421 B4galnt3Q6L8S8 986 aa28.41■■■□□ 2.14
Ptx3-201ENSMUST00000029421 Slc35g1Q8BY79 368 aa28.41■■■□□ 2.14
Ptx3-201ENSMUST00000029421 Map2P20357 1828 aa28.41■■■□□ 2.14
Ptx3-201ENSMUST00000029421 Scn7aB1AYL1 1681 aa28.4■■■□□ 2.14
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms