RNA–Protein interactions for RNA: ENSMUST00000028062.7

Vim-201, Transcript of Vimentin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Vim, Length 2,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vim-201ENSMUST00000028062 Ksr2Q3UVC0 959 aa21.1■□□□□ 0.97
Vim-201ENSMUST00000028062 Trim28Q62318 834 aa21.09■□□□□ 0.97
Vim-201ENSMUST00000028062 PaskQ8CEE6 1383 aa21.09■□□□□ 0.97
Vim-201ENSMUST00000028062 Cavin4A2AMM0 362 aa21.08■□□□□ 0.97
Vim-201ENSMUST00000028062 Fchsd2Q3USJ8 740 aa21.07■□□□□ 0.96
Vim-201ENSMUST00000028062 Cps1Q8C196 1500 aa21.06■□□□□ 0.96
Vim-201ENSMUST00000028062 Psme1P97371 249 aa21.05■□□□□ 0.96
Vim-201ENSMUST00000028062 Chd2E9PZM4 1827 aaKnown RBP21.05■□□□□ 0.96
Vim-201ENSMUST00000028062 Asxl2Q8BZ32 1370 aa21.04■□□□□ 0.96
Vim-201ENSMUST00000028062 Dbr1Q923B1 550 aa21.03■□□□□ 0.96
Vim-201ENSMUST00000028062 PtpruB1AUH1 1446 aa21.03■□□□□ 0.96
Vim-201ENSMUST00000028062 Ttc21aQ8C0S4 1314 aa21.03■□□□□ 0.96
Vim-201ENSMUST00000028062 Kif1aP33173 1695 aa21.03■□□□□ 0.96
Vim-201ENSMUST00000028062 Duxf3A0A0N4SV92 674 aa21.02■□□□□ 0.96
Vim-201ENSMUST00000028062 Idi2Q8BFZ6 227 aa21.02■□□□□ 0.96
Vim-201ENSMUST00000028062 Slc12a5Q91V14 1138 aa21.02■□□□□ 0.96
Vim-201ENSMUST00000028062 Txndc2Q6P902 515 aa21.02■□□□□ 0.95
Vim-201ENSMUST00000028062 Slit3Q9WVB4 1523 aa21.01■□□□□ 0.95
Vim-201ENSMUST00000028062 Atp7bQ64446 1462 aa21■□□□□ 0.95
Vim-201ENSMUST00000028062 Ankrd50F7BE84 1390 aa21■□□□□ 0.95
Vim-201ENSMUST00000028062 Pik3r4Q8VD65 1358 aa21■□□□□ 0.95
Vim-201ENSMUST00000028062 Ppp1r15aP17564 657 aa21■□□□□ 0.95
Vim-201ENSMUST00000028062 Adamtsl3G3UXC7 1706 aa21■□□□□ 0.95
Vim-201ENSMUST00000028062 NudcO35685 332 aaKnown RBP20.99■□□□□ 0.95
Vim-201ENSMUST00000028062 CastP51125 788 aa20.99■□□□□ 0.95
Vim-201ENSMUST00000028062 Q4VA45 678 aa20.99■□□□□ 0.95
Vim-201ENSMUST00000028062 Polr3glQ8R0C0 218 aa20.99■□□□□ 0.95
Vim-201ENSMUST00000028062 Ccdc27Q3V036 639 aa20.98■□□□□ 0.95
Vim-201ENSMUST00000028062 PalmQ9Z0P4 383 aa20.97■□□□□ 0.95
Vim-201ENSMUST00000028062 Swt1Q9DBQ9 907 aa20.97■□□□□ 0.95
Vim-201ENSMUST00000028062 Rlbp1Q9Z275 317 aa20.97■□□□□ 0.95
Vim-201ENSMUST00000028062 Nkx1-2P42580 305 aa20.96■□□□□ 0.95
Vim-201ENSMUST00000028062 Ccdc171E9Q1U1 1324 aa20.96■□□□□ 0.95
Vim-201ENSMUST00000028062 IghaA0A0A6YXW6 389 aa20.95■□□□□ 0.94
Vim-201ENSMUST00000028062 Hoxb7P09024 217 aa20.95■□□□□ 0.94
Vim-201ENSMUST00000028062 Dip2bQ3UH60 1574 aa20.95■□□□□ 0.94
Vim-201ENSMUST00000028062 Pik3c2bE9QAN8 1632 aa20.94■□□□□ 0.94
Vim-201ENSMUST00000028062 Trim26Q99PN3 545 aa20.94■□□□□ 0.94
Vim-201ENSMUST00000028062 CatipB9EKE5 520 aa20.93■□□□□ 0.94
Vim-201ENSMUST00000028062 ChgaP26339 463 aaKnown RBP20.93■□□□□ 0.94
Vim-201ENSMUST00000028062 Tmc1Q8R4P5 757 aa20.93■□□□□ 0.94
Vim-201ENSMUST00000028062 Sirt1Q923E4 737 aa20.93■□□□□ 0.94
Vim-201ENSMUST00000028062 Tnrc6bQ8BKI2 1810 aaKnown RBP20.93■□□□□ 0.94
Vim-201ENSMUST00000028062 Rbm25B2RY56 838 aaKnown RBP20.93■□□□□ 0.94
Vim-201ENSMUST00000028062 PzpQ61838 1495 aa20.93■□□□□ 0.94
Vim-201ENSMUST00000028062 Spef2Q8C9J3 1734 aa20.92■□□□□ 0.94
Vim-201ENSMUST00000028062 Arap3Q8R5G7 1538 aa20.91■□□□□ 0.94
Vim-201ENSMUST00000028062 Birc3O08863 600 aa20.91■□□□□ 0.94
Vim-201ENSMUST00000028062 Atl3Q91YH5 541 aa20.89■□□□□ 0.94
Vim-201ENSMUST00000028062 Uhrf1bp1lA2RSJ4 1457 aa20.89■□□□□ 0.94
Vim-201ENSMUST00000028062 Ppm1gQ61074 542 aa20.89■□□□□ 0.93
Vim-201ENSMUST00000028062 Znf316Q6PGE4 1016 aa20.88■□□□□ 0.93
Vim-201ENSMUST00000028062 Mdc1Q5PSV9 1707 aa20.88■□□□□ 0.93
Vim-201ENSMUST00000028062 Hs1bp3Q3TC93 395 aa20.87■□□□□ 0.93
Vim-201ENSMUST00000028062 Ipo8Q7TMY7 1010 aa20.87■□□□□ 0.93
Vim-201ENSMUST00000028062 Ccdc60Q8C4J0 545 aa20.87■□□□□ 0.93
Vim-201ENSMUST00000028062 CanxP35564 591 aaKnown RBP20.87■□□□□ 0.93
Vim-201ENSMUST00000028062 Dnajc5gQ8C632 165 aa20.87■□□□□ 0.93
Vim-201ENSMUST00000028062 Rsph6aQ8CDR2 708 aa20.87■□□□□ 0.93
Vim-201ENSMUST00000028062 Iqcf3Q9D498 203 aa20.86■□□□□ 0.93
Vim-201ENSMUST00000028062 Znf335A2A5K6 1337 aa20.85■□□□□ 0.93
Vim-201ENSMUST00000028062 Ccdc183A2AJB1 534 aa20.85■□□□□ 0.93
Vim-201ENSMUST00000028062 Trim30dE9PWL0 497 aa20.85■□□□□ 0.93
Vim-201ENSMUST00000028062 HnrnpmQ9D0E1 729 aaKnown RBP20.85■□□□□ 0.93
Vim-201ENSMUST00000028062 Chd4Q6PDQ2 1915 aaKnown RBP20.85■□□□□ 0.93
Vim-201ENSMUST00000028062 Astn2Q80Z10 1352 aa20.85■□□□□ 0.93
Vim-201ENSMUST00000028062 G3bp1P97855 465 aaKnown RBP20.85■□□□□ 0.93
Vim-201ENSMUST00000028062 Ak7Q9D2H2 614 aa20.85■□□□□ 0.93
Vim-201ENSMUST00000028062 Ppp1r3fQ9JIG4 799 aa20.85■□□□□ 0.93
Vim-201ENSMUST00000028062 N4bp2F8VQG7 1678 aaKnown RBP20.84■□□□□ 0.93
Vim-201ENSMUST00000028062 Dnai1Q8C0M8 701 aa20.84■□□□□ 0.93
Vim-201ENSMUST00000028062 Ppp2r3aB2RXC8 1150 aa20.83■□□□□ 0.93
Vim-201ENSMUST00000028062 Cdc37l1Q9CZP7 335 aa20.82■□□□□ 0.92
Vim-201ENSMUST00000028062 Gnai1B2RSH2 354 aa20.82■□□□□ 0.92
Vim-201ENSMUST00000028062 Gnai3Q9DC51 354 aa20.82■□□□□ 0.92
Vim-201ENSMUST00000028062 Rreb1Q3UH06 1700 aaKnown RBP20.81■□□□□ 0.92
Vim-201ENSMUST00000028062 Med1Q925J9 1575 aa20.81■□□□□ 0.92
Vim-201ENSMUST00000028062 Maco1Q7TQE6 664 aaKnown RBP20.8■□□□□ 0.92
Vim-201ENSMUST00000028062 Q3UJC8 639 aa20.8■□□□□ 0.92
Vim-201ENSMUST00000028062 Rims2Q9EQZ7 1530 aa20.8■□□□□ 0.92
Vim-201ENSMUST00000028062 4930567H17RikQ3V0K5 233 aa20.79■□□□□ 0.92
Vim-201ENSMUST00000028062 Safb2Q80YR5 991 aaKnown RBP20.79■□□□□ 0.92
Vim-201ENSMUST00000028062 NalcnQ8BXR5 1738 aa20.78■□□□□ 0.92
Vim-201ENSMUST00000028062 Vamp4O70480 141 aa20.78■□□□□ 0.92
Vim-201ENSMUST00000028062 CemipQ8BI06 1361 aa20.78■□□□□ 0.92
Vim-201ENSMUST00000028062 Lmtk3Q5XJV6 1424 aa20.78■□□□□ 0.92
Vim-201ENSMUST00000028062 Plekhm2Q80TQ5 1018 aa20.78■□□□□ 0.92
Vim-201ENSMUST00000028062 Sos1Q62245 1319 aa20.77■□□□□ 0.92
Vim-201ENSMUST00000028062 Armcx1Q9CX83 456 aa20.77■□□□□ 0.92
Vim-201ENSMUST00000028062 Nsd3Q6P2L6 1439 aa20.76■□□□□ 0.91
Vim-201ENSMUST00000028062 Aldh1l1Q8R0Y6 902 aa20.76■□□□□ 0.91
Vim-201ENSMUST00000028062 Mre11Q61216 706 aa20.75■□□□□ 0.91
Vim-201ENSMUST00000028062 Hsp90ab1P11499 724 aaKnown RBP20.75■□□□□ 0.91
Vim-201ENSMUST00000028062 D430041D05RikF6ZGR6 1678 aa20.74■□□□□ 0.91
Vim-201ENSMUST00000028062 Phlpp2Q8BXA7 1320 aa20.74■□□□□ 0.91
Vim-201ENSMUST00000028062 Q3UPC7 1272 aa20.74■□□□□ 0.91
Vim-201ENSMUST00000028062 Cavin2Q63918 418 aaKnown RBP20.74■□□□□ 0.91
Vim-201ENSMUST00000028062 Sart3Q9JLI8 962 aaKnown RBP20.74■□□□□ 0.91
Vim-201ENSMUST00000028062 Gm6268A2A3U9 297 aa20.73■□□□□ 0.91
Vim-201ENSMUST00000028062 Eif4a2P10630 407 aa20.73■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms