RNA–Protein interactions for RNA: ENSMUST00000021706.10

Traf3-201, Transcript of TNF receptor-associated factor 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf3, Length 7,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-201ENSMUST00000021706 PtprgQ05909 1442 aa12.57□□□□□ -0.4
Traf3-201ENSMUST00000021706 Naip6Q9JIB6 1403 aa12.57□□□□□ -0.4
Traf3-201ENSMUST00000021706 Ciz1Q8VEH2 845 aa12.57□□□□□ -0.4
Traf3-201ENSMUST00000021706 Bcl11bQ99PV8 884 aa12.57□□□□□ -0.4
Traf3-201ENSMUST00000021706 Ccdc171E9Q1U1 1324 aa12.57□□□□□ -0.4
Traf3-201ENSMUST00000021706 Rnf214Q8BFU3 668 aaKnown RBP12.57□□□□□ -0.4
Traf3-201ENSMUST00000021706 Ccer1Q9CQL2 403 aa12.57□□□□□ -0.4
Traf3-201ENSMUST00000021706 Asxl2Q8BZ32 1370 aa12.56□□□□□ -0.4
Traf3-201ENSMUST00000021706 Atp6v1dP57746 247 aa12.56□□□□□ -0.4
Traf3-201ENSMUST00000021706 Tfip11Q9ERA6 838 aaKnown RBP12.56□□□□□ -0.4
Traf3-201ENSMUST00000021706 Cwc27Q3TKY6 469 aa12.56□□□□□ -0.4
Traf3-201ENSMUST00000021706 Exoc6bA6H5Z3 810 aa12.56□□□□□ -0.4
Traf3-201ENSMUST00000021706 Sf3a1Q8K4Z5 791 aaKnown RBP12.56□□□□□ -0.4
Traf3-201ENSMUST00000021706 Znf608Q56A10 1511 aa12.56□□□□□ -0.4
Traf3-201ENSMUST00000021706 Adgrl2Q8JZZ7 1487 aa12.55□□□□□ -0.4
Traf3-201ENSMUST00000021706 Cnnm1Q0GA42 951 aa12.55□□□□□ -0.4
Traf3-201ENSMUST00000021706 Gsdma3Q5Y4Y6 464 aa12.55□□□□□ -0.4
Traf3-201ENSMUST00000021706 Mad1l1Q9WTX8 717 aaKnown RBP12.55□□□□□ -0.4
Traf3-201ENSMUST00000021706 Usp48Q3V0C5 1052 aa12.55□□□□□ -0.4
Traf3-201ENSMUST00000021706 HypkQ9CR41 129 aa12.55□□□□□ -0.4
Traf3-201ENSMUST00000021706 4933402E13RikQ9D4D2 429 aa12.55□□□□□ -0.4
Traf3-201ENSMUST00000021706 Pbrm1Q8BSQ9 1634 aaKnown RBP12.54□□□□□ -0.4
Traf3-201ENSMUST00000021706 Abcc2Q8VI47 1543 aa12.54□□□□□ -0.4
Traf3-201ENSMUST00000021706 TmpoQ61033 693 aaKnown RBP12.54□□□□□ -0.4
Traf3-201ENSMUST00000021706 Gas2l2Q5SSG4 860 aa12.54□□□□□ -0.4
Traf3-201ENSMUST00000021706 Cpsf1Q9EPU4 1441 aaKnown RBP12.54□□□□□ -0.4
Traf3-201ENSMUST00000021706 SphkapQ6NSW3 1687 aa12.54□□□□□ -0.4
Traf3-201ENSMUST00000021706 Atf3Q60765 181 aa12.54□□□□□ -0.4
Traf3-201ENSMUST00000021706 Klhdc4Q921I2 584 aa12.54□□□□□ -0.4
Traf3-201ENSMUST00000021706 Utp3Q9JI13 469 aaKnown RBP12.54□□□□□ -0.4
Traf3-201ENSMUST00000021706 Liat1Q810M6 228 aa12.53□□□□□ -0.4
Traf3-201ENSMUST00000021706 Cetn4Q8K4K1 168 aa12.53□□□□□ -0.4
Traf3-201ENSMUST00000021706 R3hcc1Q8BSI6 488 aa12.53□□□□□ -0.4
Traf3-201ENSMUST00000021706 Srgap3Q812A2 1099 aa12.53□□□□□ -0.4
Traf3-201ENSMUST00000021706 BccipQ9CWI3 316 aa12.53□□□□□ -0.4
Traf3-201ENSMUST00000021706 Abcc6Q9R1S7 1498 aa12.53□□□□□ -0.4
Traf3-201ENSMUST00000021706 Q3UJC8 639 aa12.52□□□□□ -0.4
Traf3-201ENSMUST00000021706 Dennd4bQ3U1Y4 1499 aa12.52□□□□□ -0.4
Traf3-201ENSMUST00000021706 Ptch1Q61115 1434 aa12.52□□□□□ -0.41
Traf3-201ENSMUST00000021706 TnikP83510 1323 aa12.52□□□□□ -0.41
Traf3-201ENSMUST00000021706 Rab11fip3Q8CHD8 1047 aa12.51□□□□□ -0.41
Traf3-201ENSMUST00000021706 Ddrgk1Q80WW9 315 aa12.51□□□□□ -0.41
Traf3-201ENSMUST00000021706 CarsQ9ER72 831 aaKnown RBP12.51□□□□□ -0.41
Traf3-201ENSMUST00000021706 IbtkQ6ZPR6 1352 aaKnown RBP12.51□□□□□ -0.41
Traf3-201ENSMUST00000021706 Wdr78E9PYY5 807 aa12.51□□□□□ -0.41
Traf3-201ENSMUST00000021706 Gnai2P08752 355 aaKnown RBP12.51□□□□□ -0.41
Traf3-201ENSMUST00000021706 Plcd4Q8K3R3 807 aa12.51□□□□□ -0.41
Traf3-201ENSMUST00000021706 Nphp1Q9QY53 687 aa12.51□□□□□ -0.41
Traf3-201ENSMUST00000021706 Gm21698A0A087WQP8 267 aa12.51□□□□□ -0.41
Traf3-201ENSMUST00000021706 Gm21671G3UY31 267 aa12.51□□□□□ -0.41
Traf3-201ENSMUST00000021706 Cfap74Q3UY96 1578 aa12.51□□□□□ -0.41
Traf3-201ENSMUST00000021706 Eif4g3Q80XI3 1579 aaKnown RBP12.51□□□□□ -0.41
Traf3-201ENSMUST00000021706 Nap1l3Q794H2 544 aa12.5□□□□□ -0.41
Traf3-201ENSMUST00000021706 Smc3Q9CW03 1217 aaKnown RBP12.5□□□□□ -0.41
Traf3-201ENSMUST00000021706 Map4k4P97820 1233 aaKnown RBP12.5□□□□□ -0.41
Traf3-201ENSMUST00000021706 Ddx11Q6AXC6 880 aa12.5□□□□□ -0.41
Traf3-201ENSMUST00000021706 Ccne1Q61457 408 aa12.5□□□□□ -0.41
Traf3-201ENSMUST00000021706 Supt6hQ62383 1726 aaKnown RBP12.5□□□□□ -0.41
Traf3-201ENSMUST00000021706 Jakmip1Q8BVL9 626 aa12.5□□□□□ -0.41
Traf3-201ENSMUST00000021706 KinQ8K339 391 aa12.5□□□□□ -0.41
Traf3-201ENSMUST00000021706 Sirt1Q923E4 737 aa12.5□□□□□ -0.41
Traf3-201ENSMUST00000021706 Nol8Q3UHX0 1147 aaKnown RBP12.5□□□□□ -0.41
Traf3-201ENSMUST00000021706 Plekhm2Q80TQ5 1018 aa12.5□□□□□ -0.41
Traf3-201ENSMUST00000021706 Kiaa1551Q5DTW7 1521 aa12.5□□□□□ -0.41
Traf3-201ENSMUST00000021706 NinlQ6ZQ12 1394 aa12.49□□□□□ -0.41
Traf3-201ENSMUST00000021706 Zpr1Q62384 459 aa12.49□□□□□ -0.41
Traf3-201ENSMUST00000021706 Smc5Q8CG46 1101 aaKnown RBP12.49□□□□□ -0.41
Traf3-201ENSMUST00000021706 Ddx54Q8K4L0 874 aaKnown RBP12.49□□□□□ -0.41
Traf3-201ENSMUST00000021706 Fam50bQ9WTJ8 334 aa12.49□□□□□ -0.41
Traf3-201ENSMUST00000021706 Kank1E9Q238 1360 aa12.49□□□□□ -0.41
Traf3-201ENSMUST00000021706 MvpQ9EQK5 861 aa12.49□□□□□ -0.41
Traf3-201ENSMUST00000021706 Sytl4Q9R0Q1 673 aa12.49□□□□□ -0.41
Traf3-201ENSMUST00000021706 Fmn2Q9JL04 1578 aa12.48□□□□□ -0.41
Traf3-201ENSMUST00000021706 Smc4Q8CG47 1286 aa12.48□□□□□ -0.41
Traf3-201ENSMUST00000021706 Sptbn5F6UCX4 1208 aa12.48□□□□□ -0.41
Traf3-201ENSMUST00000021706 Uspl1Q3ULM6 1089 aa12.48□□□□□ -0.41
Traf3-201ENSMUST00000021706 Sh3bgrQ9WUZ7 214 aa12.48□□□□□ -0.41
Traf3-201ENSMUST00000021706 Gm10563F6WIE4 79 aa12.48□□□□□ -0.41
Traf3-201ENSMUST00000021706 Bicd2Q921C5 820 aa12.48□□□□□ -0.41
Traf3-201ENSMUST00000021706 Zmym4A2A791 1549 aaKnown RBP12.48□□□□□ -0.41
Traf3-201ENSMUST00000021706 AatkQ80YE4 1365 aa12.47□□□□□ -0.41
Traf3-201ENSMUST00000021706 Q3UPC7 1272 aa12.47□□□□□ -0.41
Traf3-201ENSMUST00000021706 Zkscan2G3X952 960 aa12.47□□□□□ -0.41
Traf3-201ENSMUST00000021706 Kiaa0754Q69ZZ9 979 aa12.47□□□□□ -0.41
Traf3-201ENSMUST00000021706 Calcoco2A2A6M5 331 aa12.47□□□□□ -0.41
Traf3-201ENSMUST00000021706 Gripap1Q8VD04 806 aa12.46□□□□□ -0.41
Traf3-201ENSMUST00000021706 GnpatP98192 678 aa12.46□□□□□ -0.41
Traf3-201ENSMUST00000021706 Chrna2Q91X60 512 aa12.46□□□□□ -0.41
Traf3-201ENSMUST00000021706 Rrbp1Q99PL5 1605 aaKnown RBP12.46□□□□□ -0.41
Traf3-201ENSMUST00000021706 Edc4Q3UJB9 1406 aaKnown RBP12.46□□□□□ -0.41
Traf3-201ENSMUST00000021706 Fam208aQ69ZR9 1610 aaKnown RBP12.46□□□□□ -0.41
Traf3-201ENSMUST00000021706 Tpd52l1O54818 204 aa12.46□□□□□ -0.41
Traf3-201ENSMUST00000021706 Erc2Q6PH08 957 aa12.46□□□□□ -0.41
Traf3-201ENSMUST00000021706 Speer4bQ9D9F7 267 aa12.46□□□□□ -0.41
Traf3-201ENSMUST00000021706 Fmnl2A2APV2 1086 aa12.46□□□□□ -0.42
Traf3-201ENSMUST00000021706 Gm973E9Q295 1059 aa12.46□□□□□ -0.42
Traf3-201ENSMUST00000021706 Mroh2aD3Z750 1679 aa12.46□□□□□ -0.42
Traf3-201ENSMUST00000021706 Cpa2Q504N0 417 aa12.45□□□□□ -0.42
Traf3-201ENSMUST00000021706 Gli2Q0VGT2 1544 aa12.45□□□□□ -0.42
Traf3-201ENSMUST00000021706 Map3k4O08648 1597 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms