RNA–Protein interactions for RNA: ENSMUST00000021706.10

Traf3-201, Transcript of TNF receptor-associated factor 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf3, Length 7,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-201ENSMUST00000021706 Rhox8Q6VSS7 320 aa18.77■□□□□ 0.59
Traf3-201ENSMUST00000021706 NischQ80TM9 1593 aa17.66■□□□□ 0.42
Traf3-201ENSMUST00000021706 Ehmt2Q9Z148 1263 aaKnown RBP17.2■□□□□ 0.34
Traf3-201ENSMUST00000021706 Ccdc136Q3TVA9 1136 aa16.99■□□□□ 0.31
Traf3-201ENSMUST00000021706 Abcc9P70170 1546 aa16.69■□□□□ 0.26
Traf3-201ENSMUST00000021706 Cngb1E1AZ71 1325 aa16.57■□□□□ 0.24
Traf3-201ENSMUST00000021706 Gab3Q8BSM5 595 aa16.5■□□□□ 0.23
Traf3-201ENSMUST00000021706 Rpgrip1Q9EPQ2 1331 aa16.47■□□□□ 0.23
Traf3-201ENSMUST00000021706 Esf1Q3V1V3 845 aaKnown RBP16.44■□□□□ 0.22
Traf3-201ENSMUST00000021706 Abcc8B2RUS7 1588 aa16.4■□□□□ 0.22
Traf3-201ENSMUST00000021706 Trim41Q5NCC3 630 aa16.31■□□□□ 0.2
Traf3-201ENSMUST00000021706 Zeb1Q64318 1117 aa16.17■□□□□ 0.18
Traf3-201ENSMUST00000021706 Gm35339A0A140LHH9 1649 aa16.09■□□□□ 0.17
Traf3-201ENSMUST00000021706 Myt1lP97500 1187 aa16.08■□□□□ 0.16
Traf3-201ENSMUST00000021706 Wdr66E9Q743 1299 aa16.07■□□□□ 0.16
Traf3-201ENSMUST00000021706 Npm2Q80W85 207 aa16■□□□□ 0.15
Traf3-201ENSMUST00000021706 Ccdc180J3QNE4 1664 aa15.92■□□□□ 0.14
Traf3-201ENSMUST00000021706 Zcchc6Q5BLK4 1491 aaKnown RBP15.92■□□□□ 0.14
Traf3-201ENSMUST00000021706 Las1lA2BE28 776 aaKnown RBP15.9■□□□□ 0.14
Traf3-201ENSMUST00000021706 Acin1Q9JIX8 1338 aaKnown RBP15.84■□□□□ 0.13
Traf3-201ENSMUST00000021706 Ube2uB1AUC4 352 aa15.83■□□□□ 0.13
Traf3-201ENSMUST00000021706 Rtl1Q7M732 1744 aa15.83■□□□□ 0.12
Traf3-201ENSMUST00000021706 UbtfP25976 765 aaKnown RBP15.8■□□□□ 0.12
Traf3-201ENSMUST00000021706 HrcG5E8J6 738 aa15.73■□□□□ 0.11
Traf3-201ENSMUST00000021706 Il27Q8K3I6 234 aa15.66■□□□□ 0.1
Traf3-201ENSMUST00000021706 Ppargc1bQ8VHJ7 1014 aa15.51■□□□□ 0.07
Traf3-201ENSMUST00000021706 Rb1cc1Q9ESK9 1588 aa15.5■□□□□ 0.07
Traf3-201ENSMUST00000021706 Ap3b1Q9Z1T1 1105 aa15.48■□□□□ 0.07
Traf3-201ENSMUST00000021706 Pcgf6Q99NA9 353 aa15.4■□□□□ 0.06
Traf3-201ENSMUST00000021706 NefmP08553 848 aa15.38■□□□□ 0.05
Traf3-201ENSMUST00000021706 Pelp1Q9DBD5 1123 aaKnown RBP15.37■□□□□ 0.05
Traf3-201ENSMUST00000021706 Dcaf1Q80TR8 1506 aa15.31■□□□□ 0.04
Traf3-201ENSMUST00000021706 Slc24a1Q91WD8 1130 aa15.31■□□□□ 0.04
Traf3-201ENSMUST00000021706 Supt5hO55201 1082 aaKnown RBP15.28■□□□□ 0.04
Traf3-201ENSMUST00000021706 Chic1Q8CBW7 227 aa15.26■□□□□ 0.03
Traf3-201ENSMUST00000021706 NacadQ5SWP3 1504 aa15.24■□□□□ 0.03
Traf3-201ENSMUST00000021706 Fam50aQ9WV03 339 aaKnown RBP15.22■□□□□ 0.03
Traf3-201ENSMUST00000021706 Mier1Q5UAK0 511 aa15.19■□□□□ 0.02
Traf3-201ENSMUST00000021706 Kdm5dQ62240 1548 aa15.18■□□□□ 0.02
Traf3-201ENSMUST00000021706 Baz1aO88379 1555 aa15.15■□□□□ 0.02
Traf3-201ENSMUST00000021706 Neurod1Q60867 357 aa15.12■□□□□ 0.01
Traf3-201ENSMUST00000021706 Brd4Q9ESU6 1400 aaKnown RBP15.11■□□□□ 0.01
Traf3-201ENSMUST00000021706 CenpbP27790 599 aa15.11■□□□□ 0.01
Traf3-201ENSMUST00000021706 Plekhg3Q4VAC9 1341 aa15.1■□□□□ 0.01
Traf3-201ENSMUST00000021706 Cdk11bP24788 784 aaKnown RBP15.03■□□□□ -0
Traf3-201ENSMUST00000021706 Lmod2Q3UHZ5 550 aa15.03■□□□□ -0
Traf3-201ENSMUST00000021706 Cep164Q5DU05 1446 aa15□□□□□ -0.01
Traf3-201ENSMUST00000021706 NclP09405 707 aaKnown RBP14.99□□□□□ -0.01
Traf3-201ENSMUST00000021706 Nop58Q6DFW4 536 aaKnown RBP14.96□□□□□ -0.01
Traf3-201ENSMUST00000021706 ScribQ80U72 1612 aa14.96□□□□□ -0.02
Traf3-201ENSMUST00000021706 TonslQ6NZL6 1363 aa14.94□□□□□ -0.02
Traf3-201ENSMUST00000021706 Myt1Q8CFC2 1127 aa14.91□□□□□ -0.02
Traf3-201ENSMUST00000021706 Mapk8ip2Q9ERE9 830 aa14.91□□□□□ -0.02
Traf3-201ENSMUST00000021706 Eid3Q3V124 375 aa14.88□□□□□ -0.03
Traf3-201ENSMUST00000021706 Npm1Q61937 292 aaKnown RBP14.88□□□□□ -0.03
Traf3-201ENSMUST00000021706 Zbtb7cQ8VCZ7 619 aa14.87□□□□□ -0.03
Traf3-201ENSMUST00000021706 Eif5bQ05D44 1216 aaKnown RBP14.83□□□□□ -0.04
Traf3-201ENSMUST00000021706 Amer1Q7TS75 1132 aa14.79□□□□□ -0.04
Traf3-201ENSMUST00000021706 Rsf1E9PWW9 1441 aaKnown RBP14.77□□□□□ -0.04
Traf3-201ENSMUST00000021706 Stra8P70278 393 aa14.77□□□□□ -0.05
Traf3-201ENSMUST00000021706 Golga3P55937 1487 aa14.76□□□□□ -0.05
Traf3-201ENSMUST00000021706 Sall2Q9QX96 1004 aa14.75□□□□□ -0.05
Traf3-201ENSMUST00000021706 Sycp2Q9CUU3 1500 aa14.71□□□□□ -0.05
Traf3-201ENSMUST00000021706 Clip1Q922J3 1391 aa14.7□□□□□ -0.06
Traf3-201ENSMUST00000021706 Ubl4bQ9CQ84 188 aa14.7□□□□□ -0.06
Traf3-201ENSMUST00000021706 Gm38655A0A286YDK6 273 aa14.7□□□□□ -0.06
Traf3-201ENSMUST00000021706 Zbtb4Q5F293 982 aa14.69□□□□□ -0.06
Traf3-201ENSMUST00000021706 Ifnlr1Q8CGK5 535 aa14.69□□□□□ -0.06
Traf3-201ENSMUST00000021706 NrdcQ8BHG1 1161 aa14.67□□□□□ -0.06
Traf3-201ENSMUST00000021706 Cecr2E9Q2Z1 1453 aa14.65□□□□□ -0.06
Traf3-201ENSMUST00000021706 Os9Q8K2C7 672 aa14.65□□□□□ -0.06
Traf3-201ENSMUST00000021706 Ccdc88bQ4QRL3 1481 aa14.64□□□□□ -0.07
Traf3-201ENSMUST00000021706 Fkbp15Q6P9Q6 1216 aaKnown RBP14.62□□□□□ -0.07
Traf3-201ENSMUST00000021706 ClspnQ80YR7 1315 aa14.61□□□□□ -0.07
Traf3-201ENSMUST00000021706 Ttbk1Q6PCN3 1308 aa14.59□□□□□ -0.07
Traf3-201ENSMUST00000021706 Hnrnpul2Q00PI9 745 aaKnown RBP14.57□□□□□ -0.08
Traf3-201ENSMUST00000021706 Kif15Q6P9L6 1387 aa14.55□□□□□ -0.08
Traf3-201ENSMUST00000021706 Smarca2Q6DIC0 1577 aa14.54□□□□□ -0.08
Traf3-201ENSMUST00000021706 Chic2Q9D9G3 165 aa14.51□□□□□ -0.09
Traf3-201ENSMUST00000021706 Crybg2B7ZCC2 1516 aa14.5□□□□□ -0.09
Traf3-201ENSMUST00000021706 Tnnt3Q9QZ47 272 aa14.49□□□□□ -0.09
Traf3-201ENSMUST00000021706 Csrnp3P59055 597 aa14.48□□□□□ -0.09
Traf3-201ENSMUST00000021706 Prdm10Q3UTQ7 1184 aa14.47□□□□□ -0.09
Traf3-201ENSMUST00000021706 Aebp2Q9Z248 504 aaKnown RBP14.46□□□□□ -0.09
Traf3-201ENSMUST00000021706 CftrP26361 1476 aa14.45□□□□□ -0.1
Traf3-201ENSMUST00000021706 Anp32bQ9EST5 272 aaKnown RBP14.43□□□□□ -0.1
Traf3-201ENSMUST00000021706 Erich6D3Z6S9 713 aa14.43□□□□□ -0.1
Traf3-201ENSMUST00000021706 Synj1Q8CHC4 1574 aa14.43□□□□□ -0.1
Traf3-201ENSMUST00000021706 Setd5Q5XJV7 1441 aa14.42□□□□□ -0.1
Traf3-201ENSMUST00000021706 BlmO88700 1416 aa14.4□□□□□ -0.1
Traf3-201ENSMUST00000021706 Ercc6F8VPZ5 1481 aa14.37□□□□□ -0.11
Traf3-201ENSMUST00000021706 NeflP08551 543 aa14.34□□□□□ -0.11
Traf3-201ENSMUST00000021706 Pds5bQ4VA53 1446 aaKnown RBP14.32□□□□□ -0.12
Traf3-201ENSMUST00000021706 DiexfQ8BTT6 772 aaKnown RBP14.29□□□□□ -0.12
Traf3-201ENSMUST00000021706 Fmn1Q05860 1466 aa14.28□□□□□ -0.12
Traf3-201ENSMUST00000021706 Ccdc18Q640L5 1455 aa14.27□□□□□ -0.13
Traf3-201ENSMUST00000021706 Cep162Q6ZQ06 1403 aa14.27□□□□□ -0.13
Traf3-201ENSMUST00000021706 Anks4bQ8K3X6 423 aa14.26□□□□□ -0.13
Traf3-201ENSMUST00000021706 Rtl5Q5DTT4 599 aa14.25□□□□□ -0.13
Traf3-201ENSMUST00000021706 Eea1Q8BL66 1411 aa14.25□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 145.6 ms