RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 GCM1Q9NP62 436 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 ASCL3Q9NQ33 180 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 DLL4Q9NR61 685 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 TJP2Q9UDY2 1190 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 MTCL1Q9Y4B5 1905 aaKnown RBP2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 VWFP04275 2813 aa2.5□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZFC3H1O60293 1989 aaKnown RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 A0A1B0GTW7 788 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 MEI4A8MW99 385 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 PATL2C9JE40 543 aaKnown RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 GFRA2O00451 464 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZNF197O14709 1029 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 TRDMT1O14717 391 aaKnown RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 CCL16O15467 120 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 PCDHGA12O60330 932 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 MGEA5O60502 916 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 JAK2O60674 1132 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 USP12O75317 370 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 RPS6KA5O75582 802 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 MT-CO3P00414 261 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 SOD2P04179 222 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 WNT1P04628 370 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 ALDH2P05091 517 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 POU2F2P09086 479 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 COX6B1P14854 86 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 CALML3P27482 149 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 PCSK6P29122 969 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 ADSLP30566 484 aaPredicted RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 VIPR2P41587 438 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 GDF5P43026 501 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 RNASE9P60153 205 aaKnown RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 PPP2R2BQ00005 443 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 E2F1Q01094 437 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 ST3GAL1Q11201 340 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 FOXD4Q12950 439 aaPredicted RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 NMIQ13287 307 aaPredicted RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 RASGRF1Q13972 1273 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 TMEM266Q2M3C6 531 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 HSDL1Q3SXM5 330 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 ARHGAP29Q52LW3 1261 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 WDR45BQ5MNZ6 344 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 TMEM201Q5SNT2 666 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 FSTL4Q6MZW2 842 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 NAA16Q6N069 864 aaPredicted RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 GGNQ86UU5 652 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 FAM124AQ86V42 546 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 FAM129CQ86XR2 697 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 CERS3Q8IU89 383 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 SIRT2Q8IXJ6 389 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 RPAP2Q8IXW5 612 aaPredicted RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 PHACTR4Q8IZ21 702 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 REXO1Q8N1G1 1221 aaKnown RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 TTC9BQ8N6N2 239 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 FRMD1Q8N878 549 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 TRIML1Q8N9V2 468 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 MDGA1Q8NFP4 955 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 TTC8Q8TAM2 541 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 LMBR1Q8WVP7 490 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 RFFLQ8WZ73 363 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 NINJ1Q92982 152 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 HPS3Q969F9 1004 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 CCDC17Q96LX7 622 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 Q96M66 194 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 ASB16Q96NS5 453 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 SLC46A1Q96NT5 459 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 DPH2Q9BQC3 489 aaPredicted RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 FUCA2Q9BTY2 467 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 CELF4Q9BZC1 486 aaKnown RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 PCDH18Q9HCL0 1135 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 GTSE1Q9NYZ3 720 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 LRP2BPQ9P2M1 347 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 GABBR1Q9UBS5 961 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 PARP2Q9UGN5 583 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 ADAMTS1Q9UHI8 967 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 PNMA2Q9UL42 364 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZNF215Q9UL58 517 aaPredicted RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 LAS1LQ9Y4W2 734 aaKnown RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 IPPQ9Y573 584 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 PCDHGB6Q9Y5F9 930 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 TRPV2Q9Y5S1 764 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 RYR1P21817 5038 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 DIDO1Q9BTC0 2240 aaKnown RBP2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 HIVEP2P31629 2446 aa2.49□□□□□ -2.01
TRAV1-1-201ENST00000542354 HELZP42694 1942 aaKnown RBP2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 CNTNAP2Q9UHC6 1331 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 VPS13CQ709C8 3753 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 TNRC6BQ9UPQ9 1833 aaKnown RBP2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 HEPACAM2A8MVW5 462 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 SORBS3O60504 671 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 RTN2O75298 545 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 EGFP01133 1207 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 IFNA2P01563 188 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 HEXAP06865 529 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 RHOP08100 348 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 INSRRP14616 1297 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 PTPN2P17706 415 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 GLUD2P49448 558 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 LIG3P49916 1009 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 MEOX1P50221 254 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms