RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A TYW1Q08960 810 aaKnown RBP10.02□□□□□ -0.81
TGA1tA(UGC)A GLO3P38682 493 aaKnown RBP10.01□□□□□ -0.81
TGA1tA(UGC)A WRS1Q12109 432 aaKnown RBP10.01□□□□□ -0.81
TGA1tA(UGC)A SNU66Q12420 587 aaPredicted RBP10.01□□□□□ -0.81
TGA1tA(UGC)A HPR1P17629 752 aaKnown RBP10□□□□□ -0.81
TGA1tA(UGC)A GSM1P42950 618 aa10□□□□□ -0.81
TGA1tA(UGC)A GYP5Q12344 894 aa10□□□□□ -0.81
TGA1tA(UGC)A FLO1P32768 1537 aa10□□□□□ -0.81
TGA1tA(UGC)A RPS7AP26786 190 aaKnown RBP9.99□□□□□ -0.81
TGA1tA(UGC)A YJL171CP46992 396 aa9.99□□□□□ -0.81
TGA1tA(UGC)A HGH1P48362 394 aaKnown RBP9.99□□□□□ -0.81
TGA1tA(UGC)A MTC3P53077 123 aa9.99□□□□□ -0.81
TGA1tA(UGC)A SEC18P18759 758 aaKnown RBP9.98□□□□□ -0.81
TGA1tA(UGC)A SLA1P32790 1244 aa9.98□□□□□ -0.81
TGA1tA(UGC)A SPO1P53541 631 aa9.98□□□□□ -0.81
TGA1tA(UGC)A PSF3Q12146 194 aa9.98□□□□□ -0.81
TGA1tA(UGC)A AIM7Q12156 149 aa9.98□□□□□ -0.81
TGA1tA(UGC)A AI2P03876 854 aa9.97□□□□□ -0.81
TGA1tA(UGC)A SSF1P38789 453 aaPredicted RBP9.97□□□□□ -0.81
TGA1tA(UGC)A YNG2P38806 282 aaKnown RBP9.97□□□□□ -0.81
TGA1tA(UGC)A ACK1Q07622 623 aaPredicted RBP9.97□□□□□ -0.81
TGA1tA(UGC)A HAL5P38970 855 aaKnown RBP9.96□□□□□ -0.82
TGA1tA(UGC)A RAD2P07276 1031 aa9.95□□□□□ -0.82
TGA1tA(UGC)A SNF3P10870 884 aa9.95□□□□□ -0.82
TGA1tA(UGC)A YFH7P43591 353 aa9.95□□□□□ -0.82
TGA1tA(UGC)A DUS1P53759 423 aaKnown RBP9.95□□□□□ -0.82
TGA1tA(UGC)A CWC15Q03772 175 aaKnown RBP9.95□□□□□ -0.82
TGA1tA(UGC)A RPT3P33298 428 aaKnown RBP9.94□□□□□ -0.82
TGA1tA(UGC)A JJJ2P46997 583 aa9.94□□□□□ -0.82
TGA1tA(UGC)A YNL193WP53870 558 aa9.94□□□□□ -0.82
TGA1tA(UGC)A CBP1P07252 654 aa9.93□□□□□ -0.82
TGA1tA(UGC)A RPN7Q06103 429 aaKnown RBP9.93□□□□□ -0.82
TGA1tA(UGC)A KTR3P38130 404 aaPredicted RBP9.92□□□□□ -0.82
TGA1tA(UGC)A YIR042CP40586 236 aa9.92□□□□□ -0.82
TGA1tA(UGC)A HVG1P0CE11 249 aa9.91□□□□□ -0.82
TGA1tA(UGC)A POL32P47110 350 aa9.91□□□□□ -0.82
TGA1tA(UGC)A CSR2Q12734 1121 aa9.91□□□□□ -0.82
TGA1tA(UGC)A PIF1P07271 859 aa9.9□□□□□ -0.82
TGA1tA(UGC)A SEN54Q02825 467 aaPredicted RBP9.9□□□□□ -0.82
TGA1tA(UGC)A PNT1P38969 423 aa9.89□□□□□ -0.83
TGA1tA(UGC)A NSG2P53898 299 aa9.89□□□□□ -0.83
TGA1tA(UGC)A INM2Q05533 292 aa9.89□□□□□ -0.83
TGA1tA(UGC)A PTK1P36002 662 aaPredicted RBP9.88□□□□□ -0.83
TGA1tA(UGC)A FUN12P39730 1002 aaKnown RBP9.88□□□□□ -0.83
TGA1tA(UGC)A APL6P46682 809 aa9.88□□□□□ -0.83
TGA1tA(UGC)A RRT6P53117 311 aaPredicted RBP9.88□□□□□ -0.83
TGA1tA(UGC)A PUS6P53294 404 aa9.88□□□□□ -0.83
TGA1tA(UGC)A PUF6Q04373 656 aaKnown RBP9.88□□□□□ -0.83
TGA1tA(UGC)A PCS60P38137 543 aaKnown RBP RIP-Chip data9.87□□□□□ -0.83not detected
TGA1tA(UGC)A NIT1P40447 199 aa9.87□□□□□ -0.83
TGA1tA(UGC)A BSD2P38356 321 aa9.86□□□□□ -0.83
TGA1tA(UGC)A EPS1P40557 701 aa9.86□□□□□ -0.83
TGA1tA(UGC)A YGL242CP53066 181 aa9.86□□□□□ -0.83
TGA1tA(UGC)A VPS13Q07878 3144 aa9.85□□□□□ -0.83
TGA1tA(UGC)A NOT3P06102 836 aaKnown RBP9.85□□□□□ -0.83
TGA1tA(UGC)A KEL1P38853 1164 aaKnown RBP9.85□□□□□ -0.83
TGA1tA(UGC)A RRI2Q12348 645 aa9.85□□□□□ -0.83
TGA1tA(UGC)A NCB2Q92317 146 aa9.85□□□□□ -0.83
TGA1tA(UGC)A CYB2P00175 591 aa9.84□□□□□ -0.83
TGA1tA(UGC)A MOT2P34909 587 aaKnown RBP9.84□□□□□ -0.83
TGA1tA(UGC)A GRX7P38068 203 aa9.84□□□□□ -0.83
TGA1tA(UGC)A CST9Q06032 482 aa9.84□□□□□ -0.83
TGA1tA(UGC)A SRF1Q12516 437 aa9.84□□□□□ -0.83
TGA1tA(UGC)A TIF6Q12522 245 aaKnown RBP9.84□□□□□ -0.83
TGA1tA(UGC)A RAD53P22216 821 aa9.83□□□□□ -0.84
TGA1tA(UGC)A ALO1P54783 526 aaKnown RBP9.83□□□□□ -0.84
TGA1tA(UGC)A AAD16Q02895 342 aa9.83□□□□□ -0.84
TGA1tA(UGC)A MDL2P33311 773 aa9.82□□□□□ -0.84
TGA1tA(UGC)A ECM21P38167 1117 aaKnown RBP9.82□□□□□ -0.84
TGA1tA(UGC)A NMD2P38798 1089 aaKnown RBP9.82□□□□□ -0.84
TGA1tA(UGC)A PPM2Q08282 695 aa9.82□□□□□ -0.84
TGA1tA(UGC)A GAL2P13181 574 aa9.81□□□□□ -0.84
TGA1tA(UGC)A BOI1P38041 980 aaKnown RBP9.81□□□□□ -0.84
TGA1tA(UGC)A MLC1P53141 149 aa9.81□□□□□ -0.84
TGA1tA(UGC)A PFK2P16862 959 aaKnown RBP RIP-Chip data9.8□□□□□ -0.84not detected
TGA1tA(UGC)A NPL4P33755 580 aa9.8□□□□□ -0.84
TGA1tA(UGC)A GEF1P37020 779 aa9.8□□□□□ -0.84
TGA1tA(UGC)A BDP1P46678 594 aa9.8□□□□□ -0.84
TGA1tA(UGC)A CDC16P09798 840 aa9.79□□□□□ -0.84
TGA1tA(UGC)A ADP1P25371 1049 aa9.79□□□□□ -0.84
TGA1tA(UGC)A APE3P37302 537 aaKnown RBP9.79□□□□□ -0.84
TGA1tA(UGC)A MSH4P40965 878 aaPredicted RBP9.79□□□□□ -0.84
TGA1tA(UGC)A KAR5Q04746 504 aa9.79□□□□□ -0.84
TGA1tA(UGC)A PCL8Q08966 492 aa9.79□□□□□ -0.84
TGA1tA(UGC)A PDR18P53756 1333 aa9.79□□□□□ -0.84
TGA1tA(UGC)A NOP2P40991 618 aaKnown RBP9.78□□□□□ -0.84
TGA1tA(UGC)A PIB2P53191 635 aa9.78□□□□□ -0.84
TGA1tA(UGC)A PMA1P05030 918 aaKnown RBP9.77□□□□□ -0.85
TGA1tA(UGC)A KIN1P13185 1064 aa9.77□□□□□ -0.85
TGA1tA(UGC)A YMR147WP40218 223 aaKnown RBP9.77□□□□□ -0.85
TGA1tA(UGC)A RBA50Q04418 439 aa9.77□□□□□ -0.85
TGA1tA(UGC)A TUB2P02557 457 aaKnown RBP9.76□□□□□ -0.85
TGA1tA(UGC)A TPS3P38426 1054 aaKnown RBP9.76□□□□□ -0.85
TGA1tA(UGC)A BBC1P47068 1157 aa9.76□□□□□ -0.85
TGA1tA(UGC)A PIP2P52960 996 aa9.76□□□□□ -0.85
TGA1tA(UGC)A MRPS35P53292 345 aa9.76□□□□□ -0.85
TGA1tA(UGC)A GIN4Q12263 1142 aa9.76□□□□□ -0.85
TGA1tA(UGC)A IOC3P43596 787 aa9.75□□□□□ -0.85
TGA1tA(UGC)A PKH3Q03306 898 aaPredicted RBP9.75□□□□□ -0.85
TGA1tA(UGC)A LAM4P38800 1345 aa9.75□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms