RNA–Protein interactions for RNA: YOR127W

RGA1, Transcript of GTPase-activating protein for polarity-establishment protein Cdc42p, yeastyeast

Gene RGA1, Length 3,024 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGA1YOR127W RPN12P32496 274 aa2.52□□□□□ -2.01
RGA1YOR127W TPM2P40414 161 aa2.52□□□□□ -2.01
RGA1YOR127W CST6P40535 587 aa2.52□□□□□ -2.01
RGA1YOR127W TEA1P47988 759 aa2.52□□□□□ -2.01
RGA1YOR127W CCM1P48237 864 aaPredicted RBP2.52□□□□□ -2.01
RGA1YOR127W RIA1P53893 1110 aa2.52□□□□□ -2.01
RGA1YOR127W CLF1Q12309 687 aaPredicted RBP2.52□□□□□ -2.01
RGA1YOR127W SUI2P20459 304 aaKnown RBP2.51□□□□□ -2.01
RGA1YOR127W ATF2P53296 535 aa2.51□□□□□ -2.01
RGA1YOR127W TY1B-AO13527 1196 aaKnown RBP2.51□□□□□ -2.01
RGA1YOR127W RAD51P25454 400 aa2.51□□□□□ -2.01
RGA1YOR127W PHM6Q05637 104 aa2.51□□□□□ -2.01
RGA1YOR127W YOL057WQ08225 711 aa2.51□□□□□ -2.01
RGA1YOR127W RNA1P11745 407 aaKnown RBP2.5□□□□□ -2.01
RGA1YOR127W JNM1P36224 373 aa2.5□□□□□ -2.01
RGA1YOR127W MUM2P38236 366 aa2.5□□□□□ -2.01
RGA1YOR127W RPL34BP40525 121 aaKnown RBP2.5□□□□□ -2.01
RGA1YOR127W BDP1P46678 594 aa2.5□□□□□ -2.01
RGA1YOR127W NNF1P47149 201 aa2.5□□□□□ -2.01
RGA1YOR127W RNH70P53331 553 aa2.5□□□□□ -2.01
RGA1YOR127W VTC3Q02725 835 aa2.5□□□□□ -2.01
RGA1YOR127W RCF1Q03713 159 aa2.5□□□□□ -2.01
RGA1YOR127W BCK1Q01389 1478 aa2.5□□□□□ -2.01
RGA1YOR127W MLP2P40457 1679 aa2.5□□□□□ -2.01
RGA1YOR127W CYB2P00175 591 aa2.5□□□□□ -2.01
RGA1YOR127W INH1P01097 85 aa2.5□□□□□ -2.01
RGA1YOR127W GAP1P19145 602 aaPredicted RBP2.5□□□□□ -2.01
RGA1YOR127W PMC1P38929 1173 aaPredicted RBP2.5□□□□□ -2.01
RGA1YOR127W CHZ1P40019 153 aaPredicted RBP2.5□□□□□ -2.01
RGA1YOR127W DJP1P40564 432 aa2.5□□□□□ -2.01
RGA1YOR127W RTF1P53064 558 aa2.5□□□□□ -2.01
RGA1YOR127W HED1Q03937 162 aa2.5□□□□□ -2.01
RGA1YOR127W VMS1Q04311 632 aaKnown RBP2.5□□□□□ -2.01
RGA1YOR127W COG4Q06096 861 aa2.5□□□□□ -2.01
RGA1YOR127W USO1P25386 1790 aa2.5□□□□□ -2.01
RGA1YOR127W SMC4Q12267 1418 aa2.5□□□□□ -2.01
RGA1YOR127W MYO4P32492 1471 aa2.5□□□□□ -2.01
RGA1YOR127W CDC31P06704 161 aaKnown RBP2.5□□□□□ -2.01
RGA1YOR127W SIT4P20604 311 aa2.5□□□□□ -2.01
RGA1YOR127W SDH2P21801 266 aa2.5□□□□□ -2.01
RGA1YOR127W KIP2P28743 706 aa2.5□□□□□ -2.01
RGA1YOR127W TAF1P46677 1066 aa2.5□□□□□ -2.01
RGA1YOR127W YNL247WP53852 767 aaKnown RBP2.5□□□□□ -2.01
RGA1YOR127W BNI5P53890 448 aaKnown RBP2.5□□□□□ -2.01
RGA1YOR127W SRP1Q02821 542 aaKnown RBP2.5□□□□□ -2.01
RGA1YOR127W GGA1Q06336 557 aa2.5□□□□□ -2.01
RGA1YOR127W FUN12P39730 1002 aaKnown RBP2.49□□□□□ -2.01
RGA1YOR127W AIR1P40507 360 aaKnown RBP2.49□□□□□ -2.01
RGA1YOR127W ESF2P53743 316 aaKnown RBP2.49□□□□□ -2.01
RGA1YOR127W YNL115CP53925 644 aa2.49□□□□□ -2.01
RGA1YOR127W GDE1Q02979 1223 aa2.49□□□□□ -2.01
RGA1YOR127W CLP1Q08685 445 aaPredicted RBP2.49□□□□□ -2.01
RGA1YOR127W HMI1Q12039 706 aa2.49□□□□□ -2.01
RGA1YOR127W YVC1Q12324 675 aa2.49□□□□□ -2.01
RGA1YOR127W RPL5P26321 297 aaKnown RBP2.49□□□□□ -2.01
RGA1YOR127W ASH1P34233 588 aa2.49□□□□□ -2.01
RGA1YOR127W YMR124WP39523 943 aaKnown RBP2.49□□□□□ -2.01
RGA1YOR127W TIF4631P39935 952 aaKnown RBP2.49□□□□□ -2.01
RGA1YOR127W GYP7P48365 746 aa2.49□□□□□ -2.01
RGA1YOR127W DOS2P54858 310 aa2.49□□□□□ -2.01
RGA1YOR127W APC5Q08683 685 aa2.49□□□□□ -2.01
RGA1YOR127W YEF3P16521 1044 aaKnown RBP2.48□□□□□ -2.01
RGA1YOR127W SRP54P20424 541 aaKnown RBP2.48□□□□□ -2.01
RGA1YOR127W SLY41P22215 453 aa2.48□□□□□ -2.01
RGA1YOR127W PHO84P25297 587 aaKnown RBP2.48□□□□□ -2.01
RGA1YOR127W BRF1P29056 596 aa2.48□□□□□ -2.01
RGA1YOR127W ABZ1P37254 787 aaPredicted RBP2.48□□□□□ -2.01
RGA1YOR127W NMD3P38861 518 aaKnown RBP2.48□□□□□ -2.01
RGA1YOR127W CLA4P48562 842 aa2.48□□□□□ -2.01
RGA1YOR127W PKH1Q03407 766 aa2.48□□□□□ -2.01
RGA1YOR127W KAR5Q04746 504 aa2.48□□□□□ -2.01
RGA1YOR127W MDM38Q08179 573 aa2.48□□□□□ -2.01
RGA1YOR127W SSF2Q12153 453 aaPredicted RBP2.48□□□□□ -2.01
RGA1YOR127W SSK22P25390 1331 aaPredicted RBP2.48□□□□□ -2.01
RGA1YOR127W TY1A-DR4O74302 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-HP0C2I4 478 aaKnown RBP2.48□□□□□ -2.01
RGA1YOR127W TY1A-AP0CX57 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-PR1P0CX58 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-ORP0CX59 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-PR2P0CX60 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-DR5P0CX65 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-ER2P0CX66 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-GR3P0CX67 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-LR1P0CX68 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-MR2P0CX69 440 aa2.48□□□□□ -2.01
RGA1YOR127W SSB1P11484 613 aaKnown RBP2.48□□□□□ -2.01
RGA1YOR127W MER1P16523 270 aa2.48□□□□□ -2.01
RGA1YOR127W SAS3P34218 831 aa2.48□□□□□ -2.01
RGA1YOR127W PAM1P37304 830 aaKnown RBP2.48□□□□□ -2.01
RGA1YOR127W MAL31P38156 614 aa2.48□□□□□ -2.01
RGA1YOR127W POL5P39985 1022 aaKnown RBP2.48□□□□□ -2.01
RGA1YOR127W SSB2P40150 613 aaKnown RBP2.48□□□□□ -2.01
RGA1YOR127W TY1A-JR2P47099 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-DR1Q03856 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-ML1Q04706 440 aaKnown RBP2.48□□□□□ -2.01
RGA1YOR127W PUS5Q06244 254 aa2.48□□□□□ -2.01
RGA1YOR127W ERF2Q06551 359 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-BRQ12217 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-NL2Q12470 440 aa2.48□□□□□ -2.01
RGA1YOR127W TY1A-GR2Q12485 440 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms