RNA–Protein interactions for RNA: YOL087C

DUF1, Transcript of Ubiquitin-binding protein of unknown function, yeastyeast

Gene DUF1, Length 3,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DUF1YOL087C RPS6BP0CX38 236 aaPredicted RBP3.65□□□□□ -1.83
DUF1YOL087C DEF1P35732 738 aaKnown RBP3.64□□□□□ -1.83
DUF1YOL087C ERP5P38819 212 aa3.64□□□□□ -1.83
DUF1YOL087C FAF1P40546 346 aaPredicted RBP3.64□□□□□ -1.83
DUF1YOL087C RPN4Q03465 531 aa3.64□□□□□ -1.83
DUF1YOL087C UTR2P32623 467 aa3.64□□□□□ -1.83
DUF1YOL087C BOI1P38041 980 aaKnown RBP3.64□□□□□ -1.83
DUF1YOL087C ESF2P53743 316 aaKnown RBP3.64□□□□□ -1.83
DUF1YOL087C PUF6Q04373 656 aaKnown RBP3.64□□□□□ -1.83
DUF1YOL087C PNP1Q05788 311 aa3.64□□□□□ -1.83
DUF1YOL087C PSK2Q08217 1101 aa3.63□□□□□ -1.83
DUF1YOL087C WHI5Q12416 295 aa3.63□□□□□ -1.83
DUF1YOL087C KAR1P11927 433 aa3.63□□□□□ -1.83
DUF1YOL087C UBP1P25037 809 aa3.63□□□□□ -1.83
DUF1YOL087C KTR2P33550 425 aa3.63□□□□□ -1.83
DUF1YOL087C VPS24P36095 224 aaKnown RBP3.63□□□□□ -1.83
DUF1YOL087C UTP7P40055 554 aaKnown RBP3.63□□□□□ -1.83
DUF1YOL087C POL32P47110 350 aa3.63□□□□□ -1.83
DUF1YOL087C NSE3Q05541 303 aa3.63□□□□□ -1.83
DUF1YOL087C YPQ2Q06328 317 aa3.63□□□□□ -1.83
DUF1YOL087C WTM2Q12206 467 aa3.63□□□□□ -1.83
DUF1YOL087C DPS1P04802 557 aaKnown RBP3.63□□□□□ -1.83
DUF1YOL087C FUI1P38196 639 aa3.63□□□□□ -1.83
DUF1YOL087C YGL081WP53156 320 aa3.63□□□□□ -1.83
DUF1YOL087C SRC1Q03707 834 aa3.63□□□□□ -1.83
DUF1YOL087C YBL113CQ7M4S9 792 aa3.63□□□□□ -1.83
DUF1YOL087C CYT1P07143 309 aa3.62□□□□□ -1.83
DUF1YOL087C PPX1P38698 397 aa3.62□□□□□ -1.83
DUF1YOL087C OYE2Q03558 400 aaKnown RBP3.62□□□□□ -1.83
DUF1YOL087C CEF1Q03654 590 aaPredicted RBP3.62□□□□□ -1.83
DUF1YOL087C GRX3Q03835 250 aa3.62□□□□□ -1.83
DUF1YOL087C CAB1Q04430 367 aa3.62□□□□□ -1.83
DUF1YOL087C POB3Q04636 552 aaKnown RBP3.62□□□□□ -1.83
DUF1YOL087C PUN1Q06991 263 aa3.62□□□□□ -1.83
DUF1YOL087C ERP4Q12450 207 aa3.62□□□□□ -1.83
DUF1YOL087C SEC6P32844 805 aa3.62□□□□□ -1.83
DUF1YOL087C SEC8P32855 1065 aa3.62□□□□□ -1.83
DUF1YOL087C UBP12P39538 1254 aa3.62□□□□□ -1.83
DUF1YOL087C MDJ2P42834 146 aa3.62□□□□□ -1.83
DUF1YOL087C YJR107WP47145 328 aa3.62□□□□□ -1.83
DUF1YOL087C YNL165WP53891 406 aa3.62□□□□□ -1.83
DUF1YOL087C NGR1P32831 672 aaKnown RBP3.62□□□□□ -1.83
DUF1YOL087C GLO3P38682 493 aaKnown RBP3.62□□□□□ -1.83
DUF1YOL087C MEH1Q02205 184 aa3.62□□□□□ -1.83
DUF1YOL087C KAR5Q04746 504 aa3.62□□□□□ -1.83
DUF1YOL087C ASH1P34233 588 aa3.61□□□□□ -1.83
DUF1YOL087C ALD3P54114 506 aa3.61□□□□□ -1.83
DUF1YOL087C SNU66Q12420 587 aaPredicted RBP3.61□□□□□ -1.83
DUF1YOL087C CDC4P07834 779 aa3.61□□□□□ -1.83
DUF1YOL087C SRS2P12954 1174 aa3.61□□□□□ -1.83
DUF1YOL087C DAT1P13483 248 aaKnown RBP3.61□□□□□ -1.83
DUF1YOL087C SRP40P32583 406 aaPredicted RBP3.61□□□□□ -1.83
DUF1YOL087C YJR142WP47173 342 aa3.61□□□□□ -1.83
DUF1YOL087C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
DUF1YOL087C BDS1Q08347 646 aa3.61□□□□□ -1.83
DUF1YOL087C THS1P04801 734 aaKnown RBP3.6□□□□□ -1.83
DUF1YOL087C VAN1P23642 535 aa3.6□□□□□ -1.83
DUF1YOL087C YBR197CP38306 217 aa3.6□□□□□ -1.83
DUF1YOL087C HXT5P38695 592 aa3.6□□□□□ -1.83
DUF1YOL087C NMD3P38861 518 aaKnown RBP3.6□□□□□ -1.83
DUF1YOL087C IES1P43579 692 aa3.6□□□□□ -1.83
DUF1YOL087C ITC1P53125 1264 aa3.6□□□□□ -1.83
DUF1YOL087C QCR6P00127 147 aa3.6□□□□□ -1.83
DUF1YOL087C AFT1P22149 690 aa3.6□□□□□ -1.83
DUF1YOL087C VAC8P39968 578 aa3.6□□□□□ -1.83
DUF1YOL087C FRT1Q99332 602 aa3.6□□□□□ -1.83
DUF1YOL087C TRX2P22803 104 aaKnown RBP3.6□□□□□ -1.83
DUF1YOL087C YKL091CP33324 310 aaKnown RBP3.6□□□□□ -1.83
DUF1YOL087C YHL050CP38721 697 aa3.6□□□□□ -1.83
DUF1YOL087C YHR219WP38900 624 aa3.6□□□□□ -1.83
DUF1YOL087C YFL034WP43564 1073 aa3.6□□□□□ -1.83
DUF1YOL087C MSB3P48566 633 aaPredicted RBP3.6□□□□□ -1.83
DUF1YOL087C ATG1P53104 897 aa3.6□□□□□ -1.83
DUF1YOL087C TY1A-DR3Q12441 440 aa3.6□□□□□ -1.83
DUF1YOL087C MAL31P38156 614 aa3.59□□□□□ -1.83
DUF1YOL087C RTT106P40161 455 aa3.59□□□□□ -1.83
DUF1YOL087C TLG1Q03322 224 aa3.59□□□□□ -1.83
DUF1YOL087C ENT2Q05785 613 aa3.59□□□□□ -1.83
DUF1YOL087C JIP5Q06214 492 aaPredicted RBP3.59□□□□□ -1.83
DUF1YOL087C RPB10P22139 70 aa3.59□□□□□ -1.83
DUF1YOL087C SHM1P37292 490 aaPredicted RBP3.59□□□□□ -1.83
DUF1YOL087C GRS1P38088 690 aaKnown RBP3.59□□□□□ -1.83
DUF1YOL087C SSN3P39073 555 aa3.59□□□□□ -1.83
DUF1YOL087C SUM1P46676 1062 aa3.59□□□□□ -1.83
DUF1YOL087C FOX2Q02207 900 aaKnown RBP3.59□□□□□ -1.83
DUF1YOL087C DLD1P32891 587 aa3.59□□□□□ -1.84
DUF1YOL087C PBP2P38151 413 aaKnown RBP RIP-Chip data3.59□□□□□ -1.84not detected
DUF1YOL087C PAF1P38351 445 aa3.59□□□□□ -1.84
DUF1YOL087C AAD14P42884 376 aa3.59□□□□□ -1.84
DUF1YOL087C OPI1P21957 404 aa3.58□□□□□ -1.84
DUF1YOL087C MNL2Q12205 849 aa3.58□□□□□ -1.84
DUF1YOL087C VPS5Q92331 675 aa3.58□□□□□ -1.84
DUF1YOL087C TRS33Q99394 268 aa3.58□□□□□ -1.84
DUF1YOL087C UGA3P26370 528 aa3.58□□□□□ -1.84
DUF1YOL087C ISC10P32645 267 aa3.58□□□□□ -1.84
DUF1YOL087C BLI1P35727 113 aa3.58□□□□□ -1.84
DUF1YOL087C TAT2P38967 592 aa3.58□□□□□ -1.84
DUF1YOL087C QDR1P40475 563 aa3.58□□□□□ -1.84
DUF1YOL087C YJR115WP47152 169 aa3.58□□□□□ -1.84
DUF1YOL087C RPS31P05759 152 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms