RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W JJJ2P46997 583 aa5.41□□□□□ -1.54
TRM112YNR046W OXR1Q08952 273 aa5.41□□□□□ -1.54
TRM112YNR046W DAL1P32375 460 aa5.4□□□□□ -1.54
TRM112YNR046W KAP122P32767 1081 aa5.4□□□□□ -1.54
TRM112YNR046W RPT1P33299 467 aaKnown RBP5.4□□□□□ -1.54
TRM112YNR046W MET1P36150 593 aa5.4□□□□□ -1.54
TRM112YNR046W CIC1P38779 376 aaKnown RBP5.4□□□□□ -1.54
TRM112YNR046W RAD55P38953 406 aa5.4□□□□□ -1.54
TRM112YNR046W QDR2P40474 542 aa5.4□□□□□ -1.54
TRM112YNR046W AIR1P40507 360 aaKnown RBP5.4□□□□□ -1.54
TRM112YNR046W PTK2P47116 818 aaKnown RBP5.4□□□□□ -1.54
TRM112YNR046W YNL165WP53891 406 aa5.4□□□□□ -1.54
TRM112YNR046W RSC4Q02206 625 aa5.4□□□□□ -1.54
TRM112YNR046W IRE1P32361 1115 aa5.39□□□□□ -1.55
TRM112YNR046W NTA1P40354 457 aa5.39□□□□□ -1.55
TRM112YNR046W NOC3Q07896 663 aaPredicted RBP5.39□□□□□ -1.55
TRM112YNR046W MSN1P22148 382 aa5.38□□□□□ -1.55
TRM112YNR046W KTR2P33550 425 aa5.38□□□□□ -1.55
TRM112YNR046W ISW1P38144 1129 aa5.38□□□□□ -1.55
TRM112YNR046W DAK2P43550 591 aa5.38□□□□□ -1.55
TRM112YNR046W NUP85P46673 744 aa5.38□□□□□ -1.55
TRM112YNR046W VTC4P47075 721 aa5.38□□□□□ -1.55
TRM112YNR046W LSC2P53312 427 aa5.38□□□□□ -1.55
TRM112YNR046W RMD1Q03441 430 aa5.38□□□□□ -1.55
TRM112YNR046W BSC2Q05611 235 aa5.38□□□□□ -1.55
TRM112YNR046W RPS31P05759 152 aaKnown RBP5.37□□□□□ -1.55
TRM112YNR046W IRS4P36115 615 aaKnown RBP5.37□□□□□ -1.55
TRM112YNR046W YJR115WP47152 169 aa5.37□□□□□ -1.55
TRM112YNR046W MTO1P53070 669 aa5.37□□□□□ -1.55
TRM112YNR046W JIP5Q06214 492 aaPredicted RBP5.37□□□□□ -1.55
TRM112YNR046W DPS1P04802 557 aaKnown RBP5.36□□□□□ -1.55
TRM112YNR046W DLD1P32891 587 aa5.36□□□□□ -1.55
TRM112YNR046W SHM1P37292 490 aaPredicted RBP5.36□□□□□ -1.55
TRM112YNR046W GIP1P38229 639 aa5.36□□□□□ -1.55
TRM112YNR046W PEP7P32609 515 aa5.35□□□□□ -1.55
TRM112YNR046W SLA1P32790 1244 aa5.35□□□□□ -1.55
TRM112YNR046W PSY2P40164 858 aa5.35□□□□□ -1.55
TRM112YNR046W FYV10P40492 516 aa5.35□□□□□ -1.55
TRM112YNR046W RGD2P43556 714 aa5.35□□□□□ -1.55
TRM112YNR046W YJR098CP47139 656 aa5.35□□□□□ -1.55
TRM112YNR046W ORC1P54784 914 aaPredicted RBP5.35□□□□□ -1.55
TRM112YNR046W YOR296WQ08748 1289 aa5.35□□□□□ -1.55
TRM112YNR046W LEU1P07264 779 aaKnown RBP5.34□□□□□ -1.55
TRM112YNR046W RPC31P17890 251 aa5.34□□□□□ -1.55
TRM112YNR046W PDC6P26263 563 aaKnown RBP5.34□□□□□ -1.55
TRM112YNR046W MCM2P29469 868 aa5.34□□□□□ -1.55
TRM112YNR046W ECM2P38241 364 aaKnown RBP5.34□□□□□ -1.55
TRM112YNR046W TIF6Q12522 245 aaKnown RBP5.34□□□□□ -1.55
TRM112YNR046W YHL008CP38750 627 aa5.33□□□□□ -1.56
TRM112YNR046W AIM46P38885 310 aa5.33□□□□□ -1.56
TRM112YNR046W RPS26AP39938 119 aaKnown RBP5.33□□□□□ -1.56
TRM112YNR046W RPS26BP39939 119 aaKnown RBP5.33□□□□□ -1.56
TRM112YNR046W MAD1P40957 749 aa5.33□□□□□ -1.56
TRM112YNR046W NNF1P47149 201 aa5.33□□□□□ -1.56
TRM112YNR046W YGR122WP53272 402 aa5.33□□□□□ -1.56
TRM112YNR046W UBP2Q01476 1272 aa5.33□□□□□ -1.56
TRM112YNR046W SPR28Q04921 423 aa5.33□□□□□ -1.56
TRM112YNR046W YLR346CQ06139 101 aa5.33□□□□□ -1.56
TRM112YNR046W ESF1Q06344 628 aaKnown RBP5.33□□□□□ -1.56
TRM112YNR046W PSH1Q12161 406 aa5.33□□□□□ -1.56
TRM112YNR046W RPP1AP05318 106 aaPredicted RBP5.32□□□□□ -1.56
TRM112YNR046W CLN2P20438 545 aa5.32□□□□□ -1.56
TRM112YNR046W UBP15P50101 1230 aa5.32□□□□□ -1.56
TRM112YNR046W YCS4Q06156 1176 aa5.32□□□□□ -1.56
TRM112YNR046W INP54Q08227 384 aaKnown RBP5.32□□□□□ -1.56
TRM112YNR046W TY1A-DR3Q12441 440 aa5.32□□□□□ -1.56
TRM112YNR046W TCB1Q12466 1186 aa5.32□□□□□ -1.56
TRM112YNR046W KAR2P16474 682 aaKnown RBP5.31□□□□□ -1.56
TRM112YNR046W RGP1P16664 663 aa5.31□□□□□ -1.56
TRM112YNR046W BSD2P38356 321 aa5.31□□□□□ -1.56
TRM112YNR046W SKP1P52286 194 aa5.31□□□□□ -1.56
TRM112YNR046W GCR2Q01722 534 aa5.31□□□□□ -1.56
TRM112YNR046W CUS1Q02554 436 aaPredicted RBP5.31□□□□□ -1.56
TRM112YNR046W FLP1P03870 423 aa5.3□□□□□ -1.56
TRM112YNR046W HXK1P04806 485 aaKnown RBP5.3□□□□□ -1.56
TRM112YNR046W CYC8P14922 966 aa5.3□□□□□ -1.56
TRM112YNR046W MNR2P35724 969 aa5.3□□□□□ -1.56
TRM112YNR046W MRPS18P42847 217 aa5.3□□□□□ -1.56
TRM112YNR046W DAL4Q04895 635 aa5.3□□□□□ -1.56
TRM112YNR046W RAD2P07276 1031 aa5.29□□□□□ -1.56
TRM112YNR046W TRK1P12685 1235 aa5.29□□□□□ -1.56
TRM112YNR046W APM2P38700 605 aa5.29□□□□□ -1.56
TRM112YNR046W EMG1Q06287 252 aaKnown RBP5.29□□□□□ -1.56
TRM112YNR046W MAG2Q06436 670 aaKnown RBP5.29□□□□□ -1.56
TRM112YNR046W MCD1Q12158 566 aa5.29□□□□□ -1.56
TRM112YNR046W NAB2P32505 525 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
TRM112YNR046W PRP40P33203 583 aaKnown RBP5.28□□□□□ -1.56
TRM112YNR046W NCL1P38205 684 aaKnown RBP5.28□□□□□ -1.56
TRM112YNR046W OCA5P38738 679 aa5.28□□□□□ -1.56
TRM112YNR046W YIL165CP40446 119 aa5.28□□□□□ -1.56
TRM112YNR046W PIN2Q12057 282 aa5.28□□□□□ -1.56
TRM112YNR046W PET112P33893 541 aa5.27□□□□□ -1.57
TRM112YNR046W RVS167P39743 482 aaKnown RBP5.27□□□□□ -1.57
TRM112YNR046W VPS16Q03308 798 aa5.27□□□□□ -1.57
TRM112YNR046W YTA7P40340 1379 aa5.27□□□□□ -1.57
TRM112YNR046W PRE9P23638 258 aaKnown RBP5.26□□□□□ -1.57
TRM112YNR046W MRPL16P38064 232 aa5.26□□□□□ -1.57
TRM112YNR046W OSH7P38755 437 aa5.26□□□□□ -1.57
TRM112YNR046W FAA3P39002 694 aa5.26□□□□□ -1.57
TRM112YNR046W ITC1P53125 1264 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms