RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	NGR1	P32831	672 aa	Known RBP	5.88	□□□□□ -1.47
ATM1	YMR301C	ITC1	P53125	1264 aa		5.88	□□□□□ -1.47
ATM1	YMR301C	CWC15	Q03772	175 aa	Known RBP	5.88	□□□□□ -1.47
ATM1	YMR301C	THI3	Q07471	609 aa		5.88	□□□□□ -1.47
ATM1	YMR301C	PSH1	Q12161	406 aa		5.88	□□□□□ -1.47
ATM1	YMR301C	MAK11	P20484	414 aa	Known RBP	5.87	□□□□□ -1.47
ATM1	YMR301C	UBX2	Q04228	584 aa		5.87	□□□□□ -1.47
ATM1	YMR301C	CRF1	Q04930	467 aa		5.87	□□□□□ -1.47
ATM1	YMR301C	TOS4	Q06266	489 aa		5.87	□□□□□ -1.47
ATM1	YMR301C	MAM3	Q12296	706 aa		5.87	□□□□□ -1.47
ATM1	YMR301C	SAC3	P46674	1301 aa		5.87	□□□□□ -1.47
ATM1	YMR301C	MRM1	P25270	412 aa		5.86	□□□□□ -1.47
ATM1	YMR301C	PNT1	P38969	423 aa		5.86	□□□□□ -1.47
ATM1	YMR301C	GSC2	P40989	1895 aa		5.86	□□□□□ -1.47
ATM1	YMR301C	CBP1	P07252	654 aa		5.86	□□□□□ -1.47
ATM1	YMR301C	SWC3	P31376	625 aa		5.86	□□□□□ -1.47
ATM1	YMR301C	HXT10	P43581	546 aa		5.86	□□□□□ -1.47
ATM1	YMR301C	SEN54	Q02825	467 aa	Predicted RBP	5.86	□□□□□ -1.47
ATM1	YMR301C	IRC4	Q03036	179 aa		5.85	□□□□□ -1.47
ATM1	YMR301C	TYW1	Q08960	810 aa	Known RBP	5.85	□□□□□ -1.47
ATM1	YMR301C	LCB1	P25045	558 aa	Known RBP	5.84	□□□□□ -1.47
ATM1	YMR301C	RAD24	P32641	659 aa		5.84	□□□□□ -1.47
ATM1	YMR301C	PRP42	Q03776	544 aa	Known RBP	5.84	□□□□□ -1.47
ATM1	YMR301C	HVG1	P0CE11	249 aa		5.84	□□□□□ -1.47
ATM1	YMR301C	TIF6	Q12522	245 aa	Known RBP	5.84	□□□□□ -1.47
ATM1	YMR301C	CSR2	Q12734	1121 aa		5.84	□□□□□ -1.47
ATM1	YMR301C	SUI2	P20459	304 aa	Known RBP	5.83	□□□□□ -1.48
ATM1	YMR301C	RPS7A	P26786	190 aa	Known RBP	5.83	□□□□□ -1.48
ATM1	YMR301C	UTP7	P40055	554 aa	Known RBP	5.83	□□□□□ -1.48
ATM1	YMR301C	SRC1	Q03707	834 aa		5.83	□□□□□ -1.48
ATM1	YMR301C	MAK21	Q12176	1025 aa	Known RBP	5.83	□□□□□ -1.48
ATM1	YMR301C	ARG82	P07250	355 aa		5.83	□□□□□ -1.48
ATM1	YMR301C	YGL015C	P33199	130 aa		5.83	□□□□□ -1.48
ATM1	YMR301C	BCH2	P36122	765 aa		5.83	□□□□□ -1.48
ATM1	YMR301C	UBP12	P39538	1254 aa		5.83	□□□□□ -1.48
ATM1	YMR301C	MTC3	P53077	123 aa		5.83	□□□□□ -1.48
ATM1	YMR301C	SDH2	P21801	266 aa		5.82	□□□□□ -1.48
ATM1	YMR301C	MTC5	Q03897	1148 aa		5.82	□□□□□ -1.48
ATM1	YMR301C	NOP8	Q08287	484 aa	Predicted RBP	5.82	□□□□□ -1.48
ATM1	YMR301C	SRF1	Q12516	437 aa		5.82	□□□□□ -1.48
ATM1	YMR301C	BSD2	P38356	321 aa		5.81	□□□□□ -1.48
ATM1	YMR301C	SNU66	Q12420	587 aa	Predicted RBP	5.81	□□□□□ -1.48
ATM1	YMR301C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.81	□□□□□ -1.48	not detected
ATM1	YMR301C	REF2	P42073	533 aa	Predicted RBP	5.8	□□□□□ -1.48
ATM1	YMR301C	YPP1	P46951	817 aa		5.8	□□□□□ -1.48
ATM1	YMR301C	JJJ2	P46997	583 aa		5.8	□□□□□ -1.48
ATM1	YMR301C	RRT6	P53117	311 aa	Predicted RBP	5.8	□□□□□ -1.48
ATM1	YMR301C	WRS1	Q12109	432 aa	Known RBP	5.8	□□□□□ -1.48
ATM1	YMR301C	ADR1	P07248	1323 aa		5.79	□□□□□ -1.48
ATM1	YMR301C	RPT3	P33298	428 aa	Known RBP	5.79	□□□□□ -1.48
ATM1	YMR301C	BOI2	P39969	1040 aa		5.79	□□□□□ -1.48
ATM1	YMR301C	EPS1	P40557	701 aa		5.79	□□□□□ -1.48
ATM1	YMR301C	YJL171C	P46992	396 aa		5.79	□□□□□ -1.48
ATM1	YMR301C	ATF2	P53296	535 aa		5.79	□□□□□ -1.48
ATM1	YMR301C	CSI1	Q04368	295 aa		5.79	□□□□□ -1.48
ATM1	YMR301C	SUP35	P05453	685 aa	Known RBP	5.79	□□□□□ -1.48
ATM1	YMR301C	SLA1	P32790	1244 aa		5.79	□□□□□ -1.48
ATM1	YMR301C	GUA1	P38625	525 aa	Known RBP	5.79	□□□□□ -1.48
ATM1	YMR301C	MOT2	P34909	587 aa	Known RBP	5.78	□□□□□ -1.48
ATM1	YMR301C	CDC27	P38042	758 aa		5.78	□□□□□ -1.48
ATM1	YMR301C	NCS6	P53088	359 aa		5.78	□□□□□ -1.48
ATM1	YMR301C	ACK1	Q07622	623 aa	Predicted RBP	5.78	□□□□□ -1.48
ATM1	YMR301C	COQ8	P27697	501 aa		5.78	□□□□□ -1.48
ATM1	YMR301C	APE3	P37302	537 aa	Known RBP	5.78	□□□□□ -1.48
ATM1	YMR301C	NUG1	P40010	520 aa	Known RBP	5.78	□□□□□ -1.48
ATM1	YMR301C	NIT1	P40447	199 aa		5.78	□□□□□ -1.48
ATM1	YMR301C	RPP0	P05317	312 aa	Known RBP	5.77	□□□□□ -1.49
ATM1	YMR301C	YFH7	P43591	353 aa		5.77	□□□□□ -1.49
ATM1	YMR301C	TOM1	Q03280	3268 aa		5.77	□□□□□ -1.49
ATM1	YMR301C	GAL2	P13181	574 aa		5.76	□□□□□ -1.49
ATM1	YMR301C	DIT2	P21595	489 aa		5.76	□□□□□ -1.49
ATM1	YMR301C	VPS27	P40343	622 aa	Known RBP	5.76	□□□□□ -1.49
ATM1	YMR301C	PEX29	Q03370	554 aa		5.76	□□□□□ -1.49
ATM1	YMR301C	YML020W	Q03722	664 aa		5.76	□□□□□ -1.49
ATM1	YMR301C	PSF3	Q12146	194 aa		5.76	□□□□□ -1.49
ATM1	YMR301C	PAM1	P37304	830 aa	Known RBP	5.76	□□□□□ -1.49
ATM1	YMR301C	RSC30	P38781	883 aa		5.76	□□□□□ -1.49
ATM1	YMR301C	NUP42	P49686	430 aa	Known RBP	5.76	□□□□□ -1.49
ATM1	YMR301C	PUS6	P53294	404 aa		5.76	□□□□□ -1.49
ATM1	YMR301C	RBA50	Q04418	439 aa		5.76	□□□□□ -1.49
ATM1	YMR301C	PIB1	Q06651	286 aa		5.76	□□□□□ -1.49
ATM1	YMR301C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
ATM1	YMR301C	SEC18	P18759	758 aa	Known RBP	5.75	□□□□□ -1.49
ATM1	YMR301C	KEL1	P38853	1164 aa	Known RBP	5.75	□□□□□ -1.49
ATM1	YMR301C	YIR042C	P40586	236 aa		5.75	□□□□□ -1.49
ATM1	YMR301C	RPS19A	P07280	144 aa	Known RBP	5.75	□□□□□ -1.49
ATM1	YMR301C	RPS19B	P07281	144 aa	Predicted RBP	5.75	□□□□□ -1.49
ATM1	YMR301C	GLO3	P38682	493 aa	Known RBP	5.75	□□□□□ -1.49
ATM1	YMR301C	BRL1	P38770	471 aa		5.75	□□□□□ -1.49
ATM1	YMR301C	JIP4	Q03361	876 aa		5.75	□□□□□ -1.49
ATM1	YMR301C	INM2	Q05533	292 aa		5.75	□□□□□ -1.49
ATM1	YMR301C	FLO1	P32768	1537 aa		5.74	□□□□□ -1.49
ATM1	YMR301C	SNF3	P10870	884 aa		5.74	□□□□□ -1.49
ATM1	YMR301C	ASH1	P34233	588 aa		5.74	□□□□□ -1.49
ATM1	YMR301C	MAC1	P35192	417 aa		5.74	□□□□□ -1.49
ATM1	YMR301C	PTK1	P36002	662 aa	Predicted RBP	5.74	□□□□□ -1.49
ATM1	YMR301C	GYP5	Q12344	894 aa		5.74	□□□□□ -1.49
ATM1	YMR301C	RVB2	Q12464	471 aa	Known RBP	5.74	□□□□□ -1.49
ATM1	YMR301C	CDC45	Q08032	650 aa		5.73	□□□□□ -1.49
ATM1	YMR301C	PPM2	Q08282	695 aa		5.73	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms