RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB1	YMR296C	CLC1	P17891	233 aa		13.61	□□□□□ -0.23
LCB1	YMR296C	AFG2	P32794	780 aa		13.61	□□□□□ -0.23
LCB1	YMR296C	TOS4	Q06266	489 aa		13.61	□□□□□ -0.23
LCB1	YMR296C	SLA1	P32790	1244 aa		13.6	□□□□□ -0.23
LCB1	YMR296C	DJP1	P40564	432 aa		13.6	□□□□□ -0.23
LCB1	YMR296C	GSM1	P42950	618 aa		13.6	□□□□□ -0.23
LCB1	YMR296C	BRN1	P38170	754 aa		13.59	□□□□□ -0.23
LCB1	YMR296C	TRM44	Q02648	567 aa	Known RBP	13.59	□□□□□ -0.23
LCB1	YMR296C	FLO11	P08640	1367 aa		13.59	□□□□□ -0.23
LCB1	YMR296C	DLD1	P32891	587 aa		13.59	□□□□□ -0.23
LCB1	YMR296C	POM152	P39685	1337 aa		13.59	□□□□□ -0.23
LCB1	YMR296C	SNF7	P39929	240 aa	Known RBP	13.59	□□□□□ -0.23
LCB1	YMR296C	NUG1	P40010	520 aa	Known RBP	13.59	□□□□□ -0.23
LCB1	YMR296C	GCR2	Q01722	534 aa		13.59	□□□□□ -0.23
LCB1	YMR296C	TIM50	Q02776	476 aa		13.59	□□□□□ -0.23
LCB1	YMR296C	GYP5	Q12344	894 aa		13.59	□□□□□ -0.23
LCB1	YMR296C	CDC16	P09798	840 aa		13.58	□□□□□ -0.24
LCB1	YMR296C	SEC18	P18759	758 aa	Known RBP	13.58	□□□□□ -0.24
LCB1	YMR296C	HGH1	P48362	394 aa	Known RBP	13.58	□□□□□ -0.24
LCB1	YMR296C	VPS4	P52917	437 aa		13.58	□□□□□ -0.24
LCB1	YMR296C	PRP42	Q03776	544 aa	Known RBP	13.58	□□□□□ -0.24
LCB1	YMR296C	STV1	P37296	890 aa		13.57	□□□□□ -0.24
LCB1	YMR296C	SSF1	P38789	453 aa	Predicted RBP	13.57	□□□□□ -0.24
LCB1	YMR296C	YGR117C	P53270	476 aa		13.56	□□□□□ -0.24
LCB1	YMR296C	CRF1	Q04930	467 aa		13.56	□□□□□ -0.24
LCB1	YMR296C	AI2	P03876	854 aa		13.55	□□□□□ -0.24
LCB1	YMR296C	ROX1	P25042	368 aa		13.55	□□□□□ -0.24
LCB1	YMR296C	AIM7	Q12156	149 aa		13.55	□□□□□ -0.24
LCB1	YMR296C	BDP1	P46678	594 aa		13.54	□□□□□ -0.24
LCB1	YMR296C	ARG82	P07250	355 aa		13.53	□□□□□ -0.24
LCB1	YMR296C	GLO3	P38682	493 aa	Known RBP	13.53	□□□□□ -0.24
LCB1	YMR296C	HXT13	P39924	564 aa		13.53	□□□□□ -0.24
LCB1	YMR296C	VPS24	P36095	224 aa	Known RBP	13.53	□□□□□ -0.24
LCB1	YMR296C	VHR2	P40041	505 aa		13.53	□□□□□ -0.24
LCB1	YMR296C	EMP47	P43555	445 aa		13.53	□□□□□ -0.24
LCB1	YMR296C	HXT17	P53631	564 aa		13.53	□□□□□ -0.24
LCB1	YMR296C	WRS1	Q12109	432 aa	Known RBP	13.53	□□□□□ -0.24
LCB1	YMR296C	HPR1	P17629	752 aa	Known RBP	13.52	□□□□□ -0.25
LCB1	YMR296C	JJJ2	P46997	583 aa		13.52	□□□□□ -0.25
LCB1	YMR296C	YNL193W	P53870	558 aa		13.52	□□□□□ -0.25
LCB1	YMR296C	RPS7A	P26786	190 aa	Known RBP	13.51	□□□□□ -0.25
LCB1	YMR296C	RPT3	P33298	428 aa	Known RBP	13.51	□□□□□ -0.25
LCB1	YMR296C	PSF3	Q12146	194 aa		13.51	□□□□□ -0.25
LCB1	YMR296C	HAL5	P38970	855 aa	Known RBP	13.5	□□□□□ -0.25
LCB1	YMR296C	RPN7	Q06103	429 aa	Known RBP	13.5	□□□□□ -0.25
LCB1	YMR296C	SRS2	P12954	1174 aa		13.5	□□□□□ -0.25
LCB1	YMR296C	LSP1	Q12230	341 aa	Known RBP	13.5	□□□□□ -0.25
LCB1	YMR296C	TOM1	Q03280	3268 aa		13.49	□□□□□ -0.25
LCB1	YMR296C	YFH7	P43591	353 aa		13.49	□□□□□ -0.25
LCB1	YMR296C	VAS1	P07806	1104 aa	Known RBP	13.48	□□□□□ -0.25
LCB1	YMR296C	KTR3	P38130	404 aa	Predicted RBP	13.48	□□□□□ -0.25
LCB1	YMR296C	YIR042C	P40586	236 aa		13.48	□□□□□ -0.25
LCB1	YMR296C	SEN54	Q02825	467 aa	Predicted RBP	13.48	□□□□□ -0.25
LCB1	YMR296C	NCB2	Q92317	146 aa		13.48	□□□□□ -0.25
LCB1	YMR296C	UTP7	P40055	554 aa	Known RBP	13.47	□□□□□ -0.25
LCB1	YMR296C	PEA2	P40091	420 aa		13.47	□□□□□ -0.25
LCB1	YMR296C	RRD1	P40454	393 aa	Known RBP	13.47	□□□□□ -0.25
LCB1	YMR296C	RRI2	Q12348	645 aa		13.47	□□□□□ -0.25
LCB1	YMR296C	MSP1	P28737	362 aa		13.47	□□□□□ -0.25
LCB1	YMR296C	MTC3	P53077	123 aa		13.47	□□□□□ -0.25
LCB1	YMR296C	RMD1	Q03441	430 aa		13.47	□□□□□ -0.25
LCB1	YMR296C	ACK1	Q07622	623 aa	Predicted RBP	13.47	□□□□□ -0.25
LCB1	YMR296C	YIL089W	P40500	205 aa		13.46	□□□□□ -0.26
LCB1	YMR296C	INM2	Q05533	292 aa		13.46	□□□□□ -0.26
LCB1	YMR296C	YGL242C	P53066	181 aa		13.45	□□□□□ -0.26
LCB1	YMR296C	YPR148C	Q06523	435 aa		13.45	□□□□□ -0.26
LCB1	YMR296C	PIF1	P07271	859 aa		13.44	□□□□□ -0.26
LCB1	YMR296C	ECM21	P38167	1117 aa	Known RBP	13.44	□□□□□ -0.26
LCB1	YMR296C	YJL171C	P46992	396 aa		13.44	□□□□□ -0.26
LCB1	YMR296C	NOT3	P06102	836 aa	Known RBP	13.44	□□□□□ -0.26
LCB1	YMR296C	CBP1	P07252	654 aa		13.44	□□□□□ -0.26
LCB1	YMR296C	PTK1	P36002	662 aa	Predicted RBP	13.43	□□□□□ -0.26
LCB1	YMR296C	CWC15	Q03772	175 aa	Known RBP	13.43	□□□□□ -0.26
LCB1	YMR296C	PDR18	P53756	1333 aa		13.43	□□□□□ -0.26
LCB1	YMR296C	TRL1	P09880	827 aa	Known RBP	13.42	□□□□□ -0.26
LCB1	YMR296C	SNF3	P10870	884 aa		13.42	□□□□□ -0.26
LCB1	YMR296C	SLN1	P39928	1220 aa	Predicted RBP	13.42	□□□□□ -0.26
LCB1	YMR296C	PUS6	P53294	404 aa		13.42	□□□□□ -0.26
LCB1	YMR296C	NPA3	P47122	385 aa		13.41	□□□□□ -0.26
LCB1	YMR296C	ALO1	P54783	526 aa	Known RBP	13.4	□□□□□ -0.26
LCB1	YMR296C	MRPS35	P53292	345 aa		13.4	□□□□□ -0.26
LCB1	YMR296C	MLC1	P53141	149 aa		13.39	□□□□□ -0.27
LCB1	YMR296C	RIM20	Q12033	661 aa		13.39	□□□□□ -0.27
LCB1	YMR296C	AAP1	P37898	856 aa	Known RBP	13.38	□□□□□ -0.27
LCB1	YMR296C	APL6	P46682	809 aa		13.38	□□□□□ -0.27
LCB1	YMR296C	VPS20	Q04272	221 aa		13.38	□□□□□ -0.27
LCB1	YMR296C	TYW1	Q08960	810 aa	Known RBP	13.38	□□□□□ -0.27
LCB1	YMR296C	RNR2	P09938	399 aa	Known RBP	13.37	□□□□□ -0.27
LCB1	YMR296C	MDL2	P33311	773 aa		13.37	□□□□□ -0.27
LCB1	YMR296C	ETP1	P38748	585 aa	Known RBP	13.37	□□□□□ -0.27
LCB1	YMR296C	GSC2	P40989	1895 aa		13.37	□□□□□ -0.27
LCB1	YMR296C	GRX7	P38068	203 aa		13.37	□□□□□ -0.27
LCB1	YMR296C	PNT1	P38969	423 aa		13.37	□□□□□ -0.27
LCB1	YMR296C	EPS1	P40557	701 aa		13.37	□□□□□ -0.27
LCB1	YMR296C	NSG2	P53898	299 aa		13.37	□□□□□ -0.27
LCB1	YMR296C	ARL1	P38116	183 aa	Known RBP	13.36	□□□□□ -0.27
LCB1	YMR296C	FPR4	Q06205	392 aa	Predicted RBP	13.36	□□□□□ -0.27
LCB1	YMR296C	FLO1	P32768	1537 aa		13.36	□□□□□ -0.27
LCB1	YMR296C	CYB2	P00175	591 aa		13.35	□□□□□ -0.27
LCB1	YMR296C	BRE1	Q07457	700 aa	Known RBP	13.35	□□□□□ -0.27

Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms