RNA–Protein interactions for RNA: YMR277W

FCP1, Transcript of Carboxy-terminal domain (CTD) phosphatase, yeastyeast

Gene FCP1, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FCP1YMR277W RAD3P06839 778 aa8.24□□□□□ -1.09
FCP1YMR277W SPT5P27692 1063 aaKnown RBP8.24□□□□□ -1.09
FCP1YMR277W MIC60P36112 540 aa8.24□□□□□ -1.09
FCP1YMR277W RTT107P38850 1070 aa8.24□□□□□ -1.09
FCP1YMR277W FOX2Q02207 900 aaKnown RBP8.24□□□□□ -1.09
FCP1YMR277W VPS64Q03944 604 aa8.24□□□□□ -1.09
FCP1YMR277W YDR306CQ06640 478 aa8.24□□□□□ -1.09
FCP1YMR277W APL5Q08951 932 aaKnown RBP8.24□□□□□ -1.09
FCP1YMR277W SEC39Q12745 709 aa8.24□□□□□ -1.09
FCP1YMR277W NUP133P36161 1157 aa8.24□□□□□ -1.09
FCP1YMR277W SML1Q04964 104 aa8.24□□□□□ -1.09
FCP1YMR277W RMT2Q03305 412 aa8.23□□□□□ -1.09
FCP1YMR277W PUP2P32379 260 aa8.22□□□□□ -1.09
FCP1YMR277W APL2P36000 726 aaPredicted RBP8.22□□□□□ -1.09
FCP1YMR277W RFC1P38630 861 aaKnown RBP8.22□□□□□ -1.09
FCP1YMR277W LYS2P07702 1392 aa8.22□□□□□ -1.09
FCP1YMR277W YRF1-3P0CX14 1859 aa8.22□□□□□ -1.09
FCP1YMR277W YRF1-7P0CX15 1859 aa8.22□□□□□ -1.09
FCP1YMR277W YRF1-6P53819 1859 aa8.22□□□□□ -1.09
FCP1YMR277W BOI2P39969 1040 aa8.22□□□□□ -1.09
FCP1YMR277W CEP3P40969 608 aa8.22□□□□□ -1.09
FCP1YMR277W YMR1P47147 688 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
FCP1YMR277W NKP2Q06162 153 aa8.22□□□□□ -1.09
FCP1YMR277W RPC82P32349 654 aa8.21□□□□□ -1.09
FCP1YMR277W PXR1P53335 271 aaPredicted RBP8.21□□□□□ -1.09
FCP1YMR277W DNM1P54861 757 aa8.21□□□□□ -1.09
FCP1YMR277W KAR3P17119 729 aa8.21□□□□□ -1.1
FCP1YMR277W ALD3P54114 506 aa8.21□□□□□ -1.1
FCP1YMR277W ROM2P51862 1356 aaKnown RBP8.2□□□□□ -1.1
FCP1YMR277W SWI1P09547 1314 aa8.2□□□□□ -1.1
FCP1YMR277W TOP1P04786 769 aa8.2□□□□□ -1.1
FCP1YMR277W YMR124WP39523 943 aaKnown RBP8.2□□□□□ -1.1
FCP1YMR277W CST6P40535 587 aa8.2□□□□□ -1.1
FCP1YMR277W MGA2P40578 1113 aa8.2□□□□□ -1.1
FCP1YMR277W CST9Q06032 482 aa8.2□□□□□ -1.1
FCP1YMR277W YLL054CQ12244 843 aa8.2□□□□□ -1.1
FCP1YMR277W SLX5P32828 619 aaKnown RBP8.2□□□□□ -1.1
FCP1YMR277W YKR075CP36155 307 aa8.2□□□□□ -1.1
FCP1YMR277W GDT1P38301 280 aaPredicted RBP8.2□□□□□ -1.1
FCP1YMR277W HIF1Q12373 385 aa8.2□□□□□ -1.1
FCP1YMR277W SRS2P12954 1174 aa8.19□□□□□ -1.1
FCP1YMR277W VPS41P38959 992 aa8.19□□□□□ -1.1
FCP1YMR277W NHA1Q99271 985 aa8.19□□□□□ -1.1
FCP1YMR277W SUP35P05453 685 aaKnown RBP8.18□□□□□ -1.1
FCP1YMR277W LPD1P09624 499 aaKnown RBP8.18□□□□□ -1.1
FCP1YMR277W CYC8P14922 966 aa8.18□□□□□ -1.1
FCP1YMR277W PBY1P38254 753 aa8.18□□□□□ -1.1
FCP1YMR277W NDC80P40460 691 aa8.18□□□□□ -1.1
FCP1YMR277W YPR204WQ08995 1032 aa8.18□□□□□ -1.1
FCP1YMR277W GCD7P32502 381 aaPredicted RBP8.17□□□□□ -1.1
FCP1YMR277W RIO2P40160 425 aaKnown RBP8.17□□□□□ -1.1
FCP1YMR277W TY1B-AO13527 1196 aaKnown RBP8.17□□□□□ -1.1
FCP1YMR277W HXT10P43581 546 aa8.17□□□□□ -1.1
FCP1YMR277W RPN11P43588 306 aaKnown RBP8.17□□□□□ -1.1
FCP1YMR277W ARP5P53946 755 aa8.17□□□□□ -1.1
FCP1YMR277W SSA1P10591 642 aaKnown RBP8.16□□□□□ -1.1
FCP1YMR277W SSA2P10592 639 aaKnown RBP8.16□□□□□ -1.1
FCP1YMR277W ARG8P18544 423 aa8.16□□□□□ -1.1
FCP1YMR277W UBP12P39538 1254 aa8.16□□□□□ -1.1
FCP1YMR277W VID30P53076 958 aa8.16□□□□□ -1.1
FCP1YMR277W FCP1Q03254 732 aa8.16□□□□□ -1.1
FCP1YMR277W NDL1Q06568 189 aa8.16□□□□□ -1.1
FCP1YMR277W SSP2Q08646 371 aa8.16□□□□□ -1.1
FCP1YMR277W GRX1P25373 110 aaKnown RBP8.15□□□□□ -1.1
FCP1YMR277W MSH1P25846 959 aa8.15□□□□□ -1.1
FCP1YMR277W YGL082WP53155 381 aa8.15□□□□□ -1.1
FCP1YMR277W PSO2P30620 661 aa8.15□□□□□ -1.11
FCP1YMR277W RPN12P32496 274 aa8.15□□□□□ -1.11
FCP1YMR277W PEA2P40091 420 aa8.15□□□□□ -1.11
FCP1YMR277W YJR008WP47085 338 aa8.15□□□□□ -1.11
FCP1YMR277W PKH1Q03407 766 aa8.15□□□□□ -1.11
FCP1YMR277W ORM2Q06144 216 aa8.15□□□□□ -1.11
FCP1YMR277W PEX19Q07418 342 aa8.15□□□□□ -1.11
FCP1YMR277W LAM6Q08001 693 aa8.15□□□□□ -1.11
FCP1YMR277W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.15□□□□□ -1.11not detected
FCP1YMR277W TOA1P32773 286 aa8.14□□□□□ -1.11
FCP1YMR277W BRN1P38170 754 aa8.14□□□□□ -1.11
FCP1YMR277W RMD1Q03441 430 aa8.14□□□□□ -1.11
FCP1YMR277W SLA1P32790 1244 aa8.14□□□□□ -1.11
FCP1YMR277W SER1P33330 395 aaKnown RBP8.14□□□□□ -1.11
FCP1YMR277W DSF2P38213 736 aa8.14□□□□□ -1.11
FCP1YMR277W YNL035CP53962 389 aaKnown RBP8.14□□□□□ -1.11
FCP1YMR277W SLP1Q12232 587 aa8.14□□□□□ -1.11
FCP1YMR277W RAD50P12753 1312 aa8.13□□□□□ -1.11
FCP1YMR277W MFT1P33441 392 aaKnown RBP8.13□□□□□ -1.11
FCP1YMR277W RVS167P39743 482 aaKnown RBP8.13□□□□□ -1.11
FCP1YMR277W HOS4P40480 1083 aa8.13□□□□□ -1.11
FCP1YMR277W LEM3P42838 414 aa8.13□□□□□ -1.11
FCP1YMR277W TLG2Q08144 397 aa8.13□□□□□ -1.11
FCP1YMR277W DPH5P32469 300 aaPredicted RBP8.12□□□□□ -1.11
FCP1YMR277W DLD1P32891 587 aa8.12□□□□□ -1.11
FCP1YMR277W CIR1P42940 261 aa8.12□□□□□ -1.11
FCP1YMR277W YOR389WQ08912 624 aa8.12□□□□□ -1.11
FCP1YMR277W NFI1Q12216 726 aa8.12□□□□□ -1.11
FCP1YMR277W PHM7Q12252 991 aa8.12□□□□□ -1.11
FCP1YMR277W CDC16P09798 840 aa8.12□□□□□ -1.11
FCP1YMR277W SPT16P32558 1035 aaKnown RBP8.12□□□□□ -1.11
FCP1YMR277W OLA1P38219 394 aaKnown RBP8.12□□□□□ -1.11
FCP1YMR277W YJL181WP46987 611 aa8.12□□□□□ -1.11
FCP1YMR277W MCM1P11746 286 aa8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms