RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP5	YMR231W	RPG1	P38249	964 aa	Known RBP	4.96	□□□□□ -1.62
PEP5	YMR231W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
PEP5	YMR231W	YLR271W	Q06152	274 aa		4.96	□□□□□ -1.62
PEP5	YMR231W	ATG9	Q12142	997 aa		4.96	□□□□□ -1.62
PEP5	YMR231W	CPA2	P03965	1118 aa	Known RBP	4.95	□□□□□ -1.62
PEP5	YMR231W	MPH3	P0CE00	602 aa		4.95	□□□□□ -1.62
PEP5	YMR231W	CUE3	P53137	624 aa	Known RBP	4.95	□□□□□ -1.62
PEP5	YMR231W	INP54	Q08227	384 aa	Known RBP	4.95	□□□□□ -1.62
PEP5	YMR231W	NCB2	Q92317	146 aa		4.95	□□□□□ -1.62
PEP5	YMR231W	GSY2	P27472	705 aa		4.95	□□□□□ -1.62
PEP5	YMR231W	BBC1	P47068	1157 aa		4.95	□□□□□ -1.62
PEP5	YMR231W	TIM50	Q02776	476 aa		4.95	□□□□□ -1.62
PEP5	YMR231W	GAS4	Q08271	471 aa		4.95	□□□□□ -1.62
PEP5	YMR231W	SEC23	P15303	768 aa	Known RBP	4.95	□□□□□ -1.62
PEP5	YMR231W	KTR3	P38130	404 aa	Predicted RBP	4.95	□□□□□ -1.62
PEP5	YMR231W	EPS1	P40557	701 aa		4.95	□□□□□ -1.62
PEP5	YMR231W	MED8	P38304	223 aa		4.94	□□□□□ -1.62
PEP5	YMR231W	FPR4	Q06205	392 aa	Predicted RBP	4.94	□□□□□ -1.62
PEP5	YMR231W	SSK22	P25390	1331 aa	Predicted RBP	4.94	□□□□□ -1.62
PEP5	YMR231W	FBP26	P32604	452 aa		4.94	□□□□□ -1.62
PEP5	YMR231W	GEF1	P37020	779 aa		4.94	□□□□□ -1.62
PEP5	YMR231W	NUG1	P40010	520 aa	Known RBP	4.94	□□□□□ -1.62
PEP5	YMR231W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
PEP5	YMR231W	ALO1	P54783	526 aa	Known RBP	4.94	□□□□□ -1.62
PEP5	YMR231W	YCG1	Q06680	1035 aa		4.94	□□□□□ -1.62
PEP5	YMR231W	RDS1	P25611	832 aa		4.93	□□□□□ -1.62
PEP5	YMR231W	SWI3	P32591	825 aa		4.93	□□□□□ -1.62
PEP5	YMR231W	STR2	P47164	639 aa		4.93	□□□□□ -1.62
PEP5	YMR231W	YML119W	Q03208	357 aa		4.93	□□□□□ -1.62
PEP5	YMR231W	ADR1	P07248	1323 aa		4.93	□□□□□ -1.62
PEP5	YMR231W	RAD4	P14736	754 aa		4.93	□□□□□ -1.62
PEP5	YMR231W	TDA3	P38758	523 aa		4.93	□□□□□ -1.62
PEP5	YMR231W	RRM3	P38766	723 aa		4.93	□□□□□ -1.62
PEP5	YMR231W	RTT107	P38850	1070 aa		4.93	□□□□□ -1.62
PEP5	YMR231W	GPA1	P08539	472 aa		4.93	□□□□□ -1.62
PEP5	YMR231W	NFU1	P32860	256 aa		4.93	□□□□□ -1.62
PEP5	YMR231W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
PEP5	YMR231W	VPS75	P53853	264 aa		4.93	□□□□□ -1.62
PEP5	YMR231W	PKH3	Q03306	898 aa	Predicted RBP	4.93	□□□□□ -1.62
PEP5	YMR231W	NOP6	Q07623	225 aa	Known RBP	4.93	□□□□□ -1.62
PEP5	YMR231W	NEW1	Q08972	1196 aa	Known RBP	4.93	□□□□□ -1.62
PEP5	YMR231W	PET123	P17558	318 aa		4.92	□□□□□ -1.62
PEP5	YMR231W	BMH1	P29311	267 aa	Known RBP	4.92	□□□□□ -1.62
PEP5	YMR231W	ECM1	P39715	212 aa		4.92	□□□□□ -1.62
PEP5	YMR231W	RAD26	P40352	1085 aa		4.92	□□□□□ -1.62
PEP5	YMR231W	CTF18	P49956	741 aa		4.92	□□□□□ -1.62
PEP5	YMR231W	HXT1	P32465	570 aa		4.92	□□□□□ -1.62
PEP5	YMR231W	DID4	P36108	232 aa		4.92	□□□□□ -1.62
PEP5	YMR231W	CTK3	P46963	296 aa	Predicted RBP	4.92	□□□□□ -1.62
PEP5	YMR231W	SSL2	Q00578	843 aa		4.92	□□□□□ -1.62
PEP5	YMR231W	BCD1	P38772	366 aa		4.91	□□□□□ -1.62
PEP5	YMR231W	CTH1	P47976	325 aa		4.91	□□□□□ -1.62
PEP5	YMR231W	ARD1	P07347	238 aa	Predicted RBP	4.91	□□□□□ -1.62
PEP5	YMR231W	DEP1	P31385	405 aa		4.91	□□□□□ -1.62
PEP5	YMR231W	VPS41	P38959	992 aa		4.91	□□□□□ -1.62
PEP5	YMR231W	WAR1	Q03631	944 aa		4.91	□□□□□ -1.62
PEP5	YMR231W	GYP5	Q12344	894 aa		4.91	□□□□□ -1.62
PEP5	YMR231W	LPD1	P09624	499 aa	Known RBP	4.91	□□□□□ -1.62
PEP5	YMR231W	RPO26	P20435	155 aa		4.91	□□□□□ -1.62
PEP5	YMR231W	SRP40	P32583	406 aa	Predicted RBP	4.91	□□□□□ -1.62
PEP5	YMR231W	EFM2	P38347	419 aa		4.91	□□□□□ -1.62
PEP5	YMR231W	RIO2	P40160	425 aa	Known RBP	4.91	□□□□□ -1.62
PEP5	YMR231W	YKE2	P52553	114 aa		4.91	□□□□□ -1.62
PEP5	YMR231W	ABP140	Q08641	628 aa	Known RBP	4.91	□□□□□ -1.62
PEP5	YMR231W	CTI6	Q08923	506 aa		4.91	□□□□□ -1.62
PEP5	YMR231W	RMP1	Q12530	201 aa		4.91	□□□□□ -1.62
PEP5	YMR231W	PRI1	P10363	409 aa		4.9	□□□□□ -1.62
PEP5	YMR231W	SPO11	P23179	398 aa		4.9	□□□□□ -1.62
PEP5	YMR231W	PSY4	P38193	441 aa		4.9	□□□□□ -1.62
PEP5	YMR231W	BOP3	P53958	396 aa		4.9	□□□□□ -1.62
PEP5	YMR231W	RCR1	P38212	213 aa		4.9	□□□□□ -1.63
PEP5	YMR231W	ENV11	P53246	860 aa		4.9	□□□□□ -1.63
PEP5	YMR231W	SSF2	Q12153	453 aa	Predicted RBP	4.9	□□□□□ -1.63
PEP5	YMR231W	MCM16	Q12262	181 aa		4.9	□□□□□ -1.63
PEP5	YMR231W	YKL068W-A	Q3E826	78 aa		4.9	□□□□□ -1.63
PEP5	YMR231W	PEP3	P27801	918 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	CRG1	P38892	291 aa	RIP-Chip data	4.89	□□□□□ -1.63	not detected
PEP5	YMR231W	YER130C	P39959	443 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	YGL082W	P53155	381 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	AAD16	Q02895	342 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	NUR1	Q12066	484 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	GIN4	Q12263	1142 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	LAM4	P38800	1345 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	UBC1	P21734	215 aa	Known RBP	4.89	□□□□□ -1.63
PEP5	YMR231W	CNS1	P33313	385 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	YSW1	P38280	609 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	MCX1	P38323	520 aa	Predicted RBP	4.89	□□□□□ -1.63
PEP5	YMR231W	CCT4	P39078	528 aa	Known RBP	4.89	□□□□□ -1.63
PEP5	YMR231W	ARP5	P53946	755 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	SSP2	Q08646	371 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	PSH1	Q12161	406 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	TUS1	Q06412	1307 aa		4.89	□□□□□ -1.63
PEP5	YMR231W	CDC10	P25342	322 aa	Known RBP	4.88	□□□□□ -1.63
PEP5	YMR231W	BDP1	P46678	594 aa		4.88	□□□□□ -1.63
PEP5	YMR231W	YGR122W	P53272	402 aa		4.88	□□□□□ -1.63
PEP5	YMR231W	NCS2	P53923	493 aa	Predicted RBP	4.88	□□□□□ -1.63
PEP5	YMR231W	MEC3	Q02574	474 aa		4.88	□□□□□ -1.63
PEP5	YMR231W	POB3	Q04636	552 aa	Known RBP	4.88	□□□□□ -1.63
PEP5	YMR231W	KAR5	Q04746	504 aa		4.88	□□□□□ -1.63
PEP5	YMR231W	TRS33	Q99394	268 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms