RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C TRM44Q02648 567 aaKnown RBP3.12□□□□□ -1.91
SGS1YMR190C KAR2P16474 682 aaKnown RBP3.11□□□□□ -1.91
SGS1YMR190C YGR117CP53270 476 aa3.11□□□□□ -1.91
SGS1YMR190C YPL034WQ03083 165 aa3.11□□□□□ -1.91
SGS1YMR190C DPL1Q05567 589 aa3.11□□□□□ -1.91
SGS1YMR190C RAD59Q12223 238 aa3.11□□□□□ -1.91
SGS1YMR190C CDC60P26637 1090 aaKnown RBP3.11□□□□□ -1.91
SGS1YMR190C MOT2P34909 587 aaKnown RBP3.11□□□□□ -1.91
SGS1YMR190C TOM71P38825 639 aaKnown RBP3.11□□□□□ -1.91
SGS1YMR190C MSH4P40965 878 aaPredicted RBP3.11□□□□□ -1.91
SGS1YMR190C MPP10P47083 593 aaKnown RBP3.11□□□□□ -1.91
SGS1YMR190C ORC1P54784 914 aaPredicted RBP3.11□□□□□ -1.91
SGS1YMR190C YML020WQ03722 664 aa3.11□□□□□ -1.91
SGS1YMR190C SEC8P32855 1065 aa3.1□□□□□ -1.91
SGS1YMR190C SPT5P27692 1063 aaKnown RBP3.1□□□□□ -1.91
SGS1YMR190C GEF1P37020 779 aa3.1□□□□□ -1.91
SGS1YMR190C YJL007CP47080 104 aa3.1□□□□□ -1.91
SGS1YMR190C OSM1P21375 501 aaKnown RBP3.1□□□□□ -1.91
SGS1YMR190C DLD1P32891 587 aa3.1□□□□□ -1.91
SGS1YMR190C SPT21P35209 758 aa3.1□□□□□ -1.91
SGS1YMR190C NIT1P40447 199 aa3.1□□□□□ -1.91
SGS1YMR190C MMR1Q06324 491 aa3.1□□□□□ -1.91
SGS1YMR190C DPH6Q12429 685 aa3.1□□□□□ -1.91
SGS1YMR190C NUP145P49687 1317 aa3.1□□□□□ -1.91
SGS1YMR190C ICL1P28240 557 aaPredicted RBP3.1□□□□□ -1.91
SGS1YMR190C RCR1P38212 213 aa3.1□□□□□ -1.91
SGS1YMR190C RSM26P47141 266 aa3.1□□□□□ -1.91
SGS1YMR190C CDC19P00549 500 aaKnown RBP3.09□□□□□ -1.91
SGS1YMR190C FRD1P32614 470 aaKnown RBP3.09□□□□□ -1.91
SGS1YMR190C HEH2Q03281 663 aa3.09□□□□□ -1.91
SGS1YMR190C RPO41P13433 1351 aaKnown RBP3.09□□□□□ -1.91
SGS1YMR190C PKH1Q03407 766 aa3.09□□□□□ -1.91
SGS1YMR190C AHC1Q12433 566 aa3.09□□□□□ -1.91
SGS1YMR190C RPS24AP0CX31 135 aaKnown RBP3.09□□□□□ -1.92
SGS1YMR190C RPS24BP0CX32 135 aaKnown RBP3.09□□□□□ -1.92
SGS1YMR190C BUD27P43573 796 aaKnown RBP RIP-Chip data3.09□□□□□ -1.92not detected
SGS1YMR190C JJJ2P46997 583 aa3.09□□□□□ -1.92
SGS1YMR190C IXR1P33417 597 aa3.08□□□□□ -1.92
SGS1YMR190C MAM1P40065 302 aa3.08□□□□□ -1.92
SGS1YMR190C ERG12P07277 443 aa3.08□□□□□ -1.92
SGS1YMR190C RGT1P32862 1170 aa3.08□□□□□ -1.92
SGS1YMR190C SIS2P36024 562 aa3.08□□□□□ -1.92
SGS1YMR190C RGD1P38339 666 aa3.08□□□□□ -1.92
SGS1YMR190C NOP2P40991 618 aaKnown RBP3.08□□□□□ -1.92
SGS1YMR190C ESF1Q06344 628 aaKnown RBP3.08□□□□□ -1.92
SGS1YMR190C TY1B-AO13527 1196 aaKnown RBP3.07□□□□□ -1.92
SGS1YMR190C PKC1P24583 1151 aa3.07□□□□□ -1.92
SGS1YMR190C DIP2Q12220 943 aaPredicted RBP3.07□□□□□ -1.92
SGS1YMR190C YOR131CQ12486 218 aa3.07□□□□□ -1.92
SGS1YMR190C DUR1,2P32528 1835 aaKnown RBP3.07□□□□□ -1.92
SGS1YMR190C GPB2P39717 880 aa3.07□□□□□ -1.92
SGS1YMR190C HEF3P53978 1044 aaKnown RBP3.07□□□□□ -1.92
SGS1YMR190C HIM1Q06674 414 aa3.07□□□□□ -1.92
SGS1YMR190C YDL129WQ07555 291 aa3.07□□□□□ -1.92
SGS1YMR190C GAS5Q08193 484 aa3.07□□□□□ -1.92
SGS1YMR190C CFT2Q12102 859 aaPredicted RBP3.07□□□□□ -1.92
SGS1YMR190C CBP1P07252 654 aa3.07□□□□□ -1.92
SGS1YMR190C PIF1P07271 859 aa3.07□□□□□ -1.92
SGS1YMR190C KGD2P19262 463 aaPredicted RBP3.07□□□□□ -1.92
SGS1YMR190C VPS27P40343 622 aaKnown RBP3.07□□□□□ -1.92
SGS1YMR190C SRC1Q03707 834 aa3.07□□□□□ -1.92
SGS1YMR190C CDC45Q08032 650 aa3.07□□□□□ -1.92
SGS1YMR190C NOP8Q08287 484 aaPredicted RBP3.07□□□□□ -1.92
SGS1YMR190C SWI6P09959 803 aa3.07□□□□□ -1.92
SGS1YMR190C SUI2P20459 304 aaKnown RBP3.07□□□□□ -1.92
SGS1YMR190C SPO71Q03868 1245 aa3.07□□□□□ -1.92
SGS1YMR190C SMY1P32364 656 aaKnown RBP3.06□□□□□ -1.92
SGS1YMR190C CSM2P40465 213 aa3.06□□□□□ -1.92
SGS1YMR190C DNM1P54861 757 aa3.06□□□□□ -1.92
SGS1YMR190C ULP1Q02724 621 aa3.06□□□□□ -1.92
SGS1YMR190C CLF1Q12309 687 aaPredicted RBP3.06□□□□□ -1.92
SGS1YMR190C TUS1Q06412 1307 aa3.06□□□□□ -1.92
SGS1YMR190C HPR1P17629 752 aaKnown RBP3.06□□□□□ -1.92
SGS1YMR190C YRB30P53107 440 aaPredicted RBP3.06□□□□□ -1.92
SGS1YMR190C HCR1Q05775 265 aaKnown RBP3.06□□□□□ -1.92
SGS1YMR190C YPR084WQ06821 456 aa3.06□□□□□ -1.92
SGS1YMR190C RVB2Q12464 471 aaKnown RBP3.06□□□□□ -1.92
SGS1YMR190C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
SGS1YMR190C THI22Q06490 572 aa3.06□□□□□ -1.92
SGS1YMR190C SPO74P45819 413 aa3.05□□□□□ -1.92
SGS1YMR190C ADE16P54113 591 aaKnown RBP3.05□□□□□ -1.92
SGS1YMR190C KIN4Q01919 800 aa3.05□□□□□ -1.92
SGS1YMR190C PRP42Q03776 544 aaKnown RBP3.05□□□□□ -1.92
SGS1YMR190C YPR148CQ06523 435 aa3.05□□□□□ -1.92
SGS1YMR190C PRD1P25375 712 aa3.05□□□□□ -1.92
SGS1YMR190C NPL4P33755 580 aa3.05□□□□□ -1.92
SGS1YMR190C ASH1P34233 588 aa3.05□□□□□ -1.92
SGS1YMR190C SRS2P12954 1174 aa3.05□□□□□ -1.92
SGS1YMR190C JHD1P40034 492 aa3.05□□□□□ -1.92
SGS1YMR190C HUL4P40985 892 aa3.05□□□□□ -1.92
SGS1YMR190C MPH3P0CE00 602 aa3.05□□□□□ -1.92
SGS1YMR190C YOL036WQ08206 761 aa3.05□□□□□ -1.92
SGS1YMR190C LAM4P38800 1345 aa3.04□□□□□ -1.92
SGS1YMR190C TFA1P36100 482 aa3.04□□□□□ -1.92
SGS1YMR190C PAP2P53632 584 aaKnown RBP3.04□□□□□ -1.92
SGS1YMR190C RTP1Q12751 981 aa3.04□□□□□ -1.92
SGS1YMR190C PIB1Q06651 286 aa3.04□□□□□ -1.92
SGS1YMR190C YDL144CQ07589 356 aa3.04□□□□□ -1.92
SGS1YMR190C CTI6Q08923 506 aa3.04□□□□□ -1.92
SGS1YMR190C SNU66Q12420 587 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms