RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W YGR130CP53278 816 aa3.94□□□□□ -1.78
PRP39YML046W CHS2P14180 963 aa3.94□□□□□ -1.78
PRP39YML046W NTH2P35172 780 aa3.94□□□□□ -1.78
PRP39YML046W UBP5P39944 805 aa3.93□□□□□ -1.78
PRP39YML046W GUA1P38625 525 aaKnown RBP3.92□□□□□ -1.78
PRP39YML046W CUS1Q02554 436 aaPredicted RBP3.92□□□□□ -1.78
PRP39YML046W MAG2Q06436 670 aaKnown RBP3.92□□□□□ -1.78
PRP39YML046W SLP1Q12232 587 aa3.92□□□□□ -1.78
PRP39YML046W BRL1P38770 471 aa3.92□□□□□ -1.78
PRP39YML046W ENO2P00925 437 aaKnown RBP3.91□□□□□ -1.78
PRP39YML046W BIO2P32451 375 aa3.91□□□□□ -1.78
PRP39YML046W NGR1P32831 672 aaKnown RBP3.91□□□□□ -1.78
PRP39YML046W APM2P38700 605 aa3.91□□□□□ -1.78
PRP39YML046W AKR1P39010 764 aa3.9□□□□□ -1.78
PRP39YML046W UTP4Q06679 776 aaKnown RBP3.9□□□□□ -1.78
PRP39YML046W CYC7P00045 113 aa3.9□□□□□ -1.79
PRP39YML046W SUP45P12385 437 aaKnown RBP3.9□□□□□ -1.79
PRP39YML046W CYT1P07143 309 aa3.89□□□□□ -1.79
PRP39YML046W RNQ1P25367 405 aa3.89□□□□□ -1.79
PRP39YML046W RIM21P48565 533 aa3.89□□□□□ -1.79
PRP39YML046W YNR040WP53736 256 aa3.89□□□□□ -1.79
PRP39YML046W KAP122P32767 1081 aa3.88□□□□□ -1.79
PRP39YML046W SPO74P45819 413 aa3.88□□□□□ -1.79
PRP39YML046W YNL108CP53929 270 aa3.88□□□□□ -1.79
PRP39YML046W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
PRP39YML046W TY1A-NL1Q12391 440 aaKnown RBP3.88□□□□□ -1.79
PRP39YML046W MRP10O75012 95 aa3.88□□□□□ -1.79
PRP39YML046W PDI1P17967 522 aaKnown RBP3.88□□□□□ -1.79
PRP39YML046W RDS2P19541 446 aaKnown RBP3.88□□□□□ -1.79
PRP39YML046W TY4B-PA0A0B7P3V8 1104 aa3.87□□□□□ -1.79
PRP39YML046W IDI1P15496 288 aa3.87□□□□□ -1.79
PRP39YML046W TY4A-HQ6Q5P6 413 aa3.87□□□□□ -1.79
PRP39YML046W NAM7P30771 971 aaKnown RBP3.86□□□□□ -1.79
PRP39YML046W SCD5P34758 872 aa3.86□□□□□ -1.79
PRP39YML046W YKL222CP35995 705 aa3.86□□□□□ -1.79
PRP39YML046W TED1P40533 473 aa3.86□□□□□ -1.79
PRP39YML046W TSC13Q99190 310 aa3.86□□□□□ -1.79
PRP39YML046W RPC31P17890 251 aa3.85□□□□□ -1.79
PRP39YML046W YCR015CP25616 317 aa3.84□□□□□ -1.79
PRP39YML046W GIP2P40036 548 aa3.84□□□□□ -1.79
PRP39YML046W DSE4P53753 1117 aa3.84□□□□□ -1.79
PRP39YML046W REC8Q12188 680 aa3.84□□□□□ -1.79
PRP39YML046W PKC1P24583 1151 aa3.84□□□□□ -1.8
PRP39YML046W YER156CP40093 338 aaKnown RBP3.83□□□□□ -1.8
PRP39YML046W SEG2P34250 1132 aa3.82□□□□□ -1.8
PRP39YML046W NIT1P40447 199 aa3.82□□□□□ -1.8
PRP39YML046W SOK2P53438 785 aaPredicted RBP3.82□□□□□ -1.8
PRP39YML046W MSB1P21339 1137 aaKnown RBP3.81□□□□□ -1.8
PRP39YML046W HXT5P38695 592 aa3.81□□□□□ -1.8
PRP39YML046W QDR2P40474 542 aa3.8□□□□□ -1.8
PRP39YML046W ITC1P53125 1264 aa3.8□□□□□ -1.8
PRP39YML046W UBP1P25037 809 aa3.79□□□□□ -1.8
PRP39YML046W LRG1P35688 1017 aa3.79□□□□□ -1.8
PRP39YML046W SDH1Q00711 640 aa3.79□□□□□ -1.8
PRP39YML046W GIS1Q03833 894 aa3.79□□□□□ -1.8
PRP39YML046W POL12P38121 705 aaPredicted RBP3.79□□□□□ -1.8
PRP39YML046W SEA4P38164 1038 aa3.79□□□□□ -1.8
PRP39YML046W ECL1P48235 211 aa3.79□□□□□ -1.8
PRP39YML046W PRP43P53131 767 aaKnown RBP3.79□□□□□ -1.8
PRP39YML046W RSC2Q06488 889 aa3.78□□□□□ -1.8
PRP39YML046W ESC8Q08119 714 aa3.78□□□□□ -1.8
PRP39YML046W MRX10Q05648 414 aa3.77□□□□□ -1.81
PRP39YML046W YOR296WQ08748 1289 aa3.77□□□□□ -1.81
PRP39YML046W ENO1P00924 437 aaKnown RBP3.75□□□□□ -1.81
PRP39YML046W ACS2P52910 683 aaKnown RBP3.75□□□□□ -1.81
PRP39YML046W DFG16Q99234 619 aa3.75□□□□□ -1.81
PRP39YML046W GAS1P22146 559 aaKnown RBP3.75□□□□□ -1.81
PRP39YML046W PAN5P38787 379 aa3.75□□□□□ -1.81
PRP39YML046W YJL181WP46987 611 aa3.75□□□□□ -1.81
PRP39YML046W GAS4Q08271 471 aa3.75□□□□□ -1.81
PRP39YML046W PHO87P25360 923 aa3.74□□□□□ -1.81
PRP39YML046W HAP4P14064 554 aa3.73□□□□□ -1.81
PRP39YML046W GIP4P39732 760 aa3.73□□□□□ -1.81
PRP39YML046W YJL007CP47080 104 aa3.73□□□□□ -1.81
PRP39YML046W PPT1P53043 513 aa3.73□□□□□ -1.81
PRP39YML046W GCD1P09032 578 aaPredicted RBP3.72□□□□□ -1.81
PRP39YML046W PEP12P32854 288 aa3.72□□□□□ -1.81
PRP39YML046W MAE1P36013 669 aaKnown RBP3.72□□□□□ -1.81
PRP39YML046W GIP1P38229 639 aa3.72□□□□□ -1.81
PRP39YML046W BSD2P38356 321 aa3.72□□□□□ -1.81
PRP39YML046W TAF1P46677 1066 aa3.72□□□□□ -1.81
PRP39YML046W NCE103P53615 221 aa3.72□□□□□ -1.81
PRP39YML046W DYS1P38791 387 aa3.71□□□□□ -1.82
PRP39YML046W LEM3P42838 414 aa3.71□□□□□ -1.82
PRP39YML046W RPN1P38764 993 aaKnown RBP3.7□□□□□ -1.82
PRP39YML046W KTR7P40504 517 aa3.7□□□□□ -1.82
PRP39YML046W GUP1P53154 560 aa3.7□□□□□ -1.82
PRP39YML046W GIC2Q06648 383 aa3.7□□□□□ -1.82
PRP39YML046W VMA3P25515 160 aa3.69□□□□□ -1.82
PRP39YML046W YHL008CP38750 627 aa3.69□□□□□ -1.82
PRP39YML046W INP51P40559 946 aaKnown RBP3.69□□□□□ -1.82
PRP39YML046W NSI1Q12457 570 aa3.69□□□□□ -1.82
PRP39YML046W POL5P39985 1022 aaKnown RBP3.69□□□□□ -1.82
PRP39YML046W CWH41P53008 833 aa3.69□□□□□ -1.82
PRP39YML046W CDA2Q06703 312 aa3.69□□□□□ -1.82
PRP39YML046W MRPL33P20084 86 aa3.68□□□□□ -1.82
PRP39YML046W RTG2P32608 588 aaKnown RBP3.68□□□□□ -1.82
PRP39YML046W ISW1P38144 1129 aa3.68□□□□□ -1.82
PRP39YML046W CAB1Q04430 367 aa3.68□□□□□ -1.82
PRP39YML046W ELG1Q12050 791 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms