RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C CDC3P32457 520 aaKnown RBP6.9□□□□□ -1.3
SKI2YLR398C YME2P32843 850 aa6.9□□□□□ -1.3
SKI2YLR398C HOP2P53187 214 aa6.9□□□□□ -1.3
SKI2YLR398C CSI1Q04368 295 aa6.9□□□□□ -1.3
SKI2YLR398C RUP1Q12242 671 aa6.9□□□□□ -1.3
SKI2YLR398C SWI1P09547 1314 aa6.9□□□□□ -1.3
SKI2YLR398C EFB1P32471 206 aaKnown RBP6.9□□□□□ -1.3
SKI2YLR398C JNM1P36224 373 aa6.9□□□□□ -1.3
SKI2YLR398C CIN4P39110 191 aa6.9□□□□□ -1.3
SKI2YLR398C YER130CP39959 443 aa6.9□□□□□ -1.3
SKI2YLR398C PTA1Q01329 785 aaPredicted RBP6.9□□□□□ -1.3
SKI2YLR398C RPC19P28000 142 aaKnown RBP6.9□□□□□ -1.31
SKI2YLR398C NUP133P36161 1157 aa6.9□□□□□ -1.31
SKI2YLR398C GCR2Q01722 534 aa6.9□□□□□ -1.31
SKI2YLR398C SQT1P35184 431 aa6.89□□□□□ -1.31
SKI2YLR398C TFG2P41896 400 aaPredicted RBP6.89□□□□□ -1.31
SKI2YLR398C TIM11P81449 96 aaPredicted RBP6.89□□□□□ -1.31
SKI2YLR398C EIS1Q05050 843 aaKnown RBP6.89□□□□□ -1.31
SKI2YLR398C TSR1Q07381 788 aaKnown RBP6.89□□□□□ -1.31
SKI2YLR398C DNF2Q12675 1612 aa6.89□□□□□ -1.31
SKI2YLR398C SPC42P36094 363 aa6.89□□□□□ -1.31
SKI2YLR398C CIC1P38779 376 aaKnown RBP6.89□□□□□ -1.31
SKI2YLR398C THI22Q06490 572 aa6.89□□□□□ -1.31
SKI2YLR398C SEC65P29478 273 aa6.89□□□□□ -1.31
SKI2YLR398C SET2P46995 733 aaKnown RBP6.89□□□□□ -1.31
SKI2YLR398C TAN1P53072 289 aaPredicted RBP6.89□□□□□ -1.31
SKI2YLR398C ATG9Q12142 997 aa6.89□□□□□ -1.31
SKI2YLR398C YTA12P40341 825 aa6.88□□□□□ -1.31
SKI2YLR398C YLR287CQ05881 355 aa6.88□□□□□ -1.31
SKI2YLR398C HIM1Q06674 414 aa6.88□□□□□ -1.31
SKI2YLR398C NBL1Q3E7Y6 73 aa6.88□□□□□ -1.31
SKI2YLR398C HXK1P04806 485 aaKnown RBP6.88□□□□□ -1.31
SKI2YLR398C PDC1P06169 563 aaKnown RBP6.88□□□□□ -1.31
SKI2YLR398C RAD4P14736 754 aa6.88□□□□□ -1.31
SKI2YLR398C VMA2P16140 517 aaKnown RBP6.88□□□□□ -1.31
SKI2YLR398C RIA1P53893 1110 aa6.88□□□□□ -1.31
SKI2YLR398C VPS30Q02948 557 aa6.88□□□□□ -1.31
SKI2YLR398C CSC1Q06538 782 aa6.88□□□□□ -1.31
SKI2YLR398C IQG1Q12280 1495 aa6.88□□□□□ -1.31
SKI2YLR398C ZRT2Q12436 422 aa6.88□□□□□ -1.31
SKI2YLR398C PGA3Q12746 312 aaKnown RBP6.88□□□□□ -1.31
SKI2YLR398C TTI1P36097 1038 aa6.87□□□□□ -1.31
SKI2YLR398C GYP7P48365 746 aa6.87□□□□□ -1.31
SKI2YLR398C ATG23Q06671 453 aa6.87□□□□□ -1.31
SKI2YLR398C PDR1P12383 1068 aa6.87□□□□□ -1.31
SKI2YLR398C KAR3P17119 729 aa6.87□□□□□ -1.31
SKI2YLR398C BRO1P48582 844 aa6.87□□□□□ -1.31
SKI2YLR398C MRS2Q01926 470 aa6.87□□□□□ -1.31
SKI2YLR398C SSA2P10592 639 aaKnown RBP6.86□□□□□ -1.31
SKI2YLR398C GCD2P12754 651 aaPredicted RBP6.86□□□□□ -1.31
SKI2YLR398C HEM3P28789 327 aa6.86□□□□□ -1.31
SKI2YLR398C SNF2P22082 1703 aa6.86□□□□□ -1.31
SKI2YLR398C COG6P53959 839 aa6.86□□□□□ -1.31
SKI2YLR398C TAF13P11747 167 aa6.85□□□□□ -1.31
SKI2YLR398C VMA4P22203 233 aaKnown RBP6.85□□□□□ -1.31
SKI2YLR398C CLB4P24871 460 aa6.85□□□□□ -1.31
SKI2YLR398C FYV10P40492 516 aa6.85□□□□□ -1.31
SKI2YLR398C ERP6P53198 216 aa6.85□□□□□ -1.31
SKI2YLR398C UBX4P54730 416 aa6.85□□□□□ -1.31
SKI2YLR398C NPR3P38742 1146 aa6.85□□□□□ -1.31
SKI2YLR398C ATG3P40344 310 aa6.85□□□□□ -1.31
SKI2YLR398C VTC2P43585 828 aa6.85□□□□□ -1.31
SKI2YLR398C IMH1Q06704 911 aaKnown RBP6.85□□□□□ -1.31
SKI2YLR398C APL5Q08951 932 aaKnown RBP6.85□□□□□ -1.31
SKI2YLR398C SEM1O94742 89 aa6.85□□□□□ -1.31
SKI2YLR398C PRP4P20053 465 aaKnown RBP6.85□□□□□ -1.31
SKI2YLR398C RGD1P38339 666 aa6.85□□□□□ -1.31
SKI2YLR398C SNU71P53207 620 aaKnown RBP6.85□□□□□ -1.31
SKI2YLR398C SVF1Q05515 481 aa6.85□□□□□ -1.31
SKI2YLR398C HRQ1Q05549 1077 aa6.85□□□□□ -1.31
SKI2YLR398C RRI2Q12348 645 aa6.85□□□□□ -1.31
SKI2YLR398C OSH2Q12451 1283 aa6.85□□□□□ -1.31
SKI2YLR398C MTF2P10849 440 aa6.84□□□□□ -1.31
SKI2YLR398C DPH5P32469 300 aaPredicted RBP6.84□□□□□ -1.31
SKI2YLR398C SMC1P32908 1225 aa6.84□□□□□ -1.31
SKI2YLR398C CIR1P42940 261 aa6.84□□□□□ -1.31
SKI2YLR398C YGL082WP53155 381 aa6.84□□□□□ -1.31
SKI2YLR398C GPA1P08539 472 aa6.84□□□□□ -1.31
SKI2YLR398C RPS0AP32905 252 aaKnown RBP6.84□□□□□ -1.31
SKI2YLR398C RRN3P36070 627 aa6.84□□□□□ -1.31
SKI2YLR398C CEF1Q03654 590 aaPredicted RBP6.84□□□□□ -1.31
SKI2YLR398C SML1Q04964 104 aa6.84□□□□□ -1.31
SKI2YLR398C PHO87P25360 923 aa6.84□□□□□ -1.31
SKI2YLR398C ISW1P38144 1129 aa6.84□□□□□ -1.31
SKI2YLR398C CCT4P39078 528 aaKnown RBP6.84□□□□□ -1.31
SKI2YLR398C YIR014WP40570 242 aa6.84□□□□□ -1.31
SKI2YLR398C ENP2P48234 707 aaKnown RBP6.84□□□□□ -1.31
SKI2YLR398C RPS24AP0CX31 135 aaKnown RBP6.83□□□□□ -1.32
SKI2YLR398C RPS24BP0CX32 135 aaKnown RBP6.83□□□□□ -1.32
SKI2YLR398C ECM32P32644 1121 aaKnown RBP6.83□□□□□ -1.32
SKI2YLR398C SIC1P38634 284 aa6.83□□□□□ -1.32
SKI2YLR398C FMS1P50264 508 aa6.83□□□□□ -1.32
SKI2YLR398C SEC5P89102 971 aa6.83□□□□□ -1.32
SKI2YLR398C UBX2Q04228 584 aa6.83□□□□□ -1.32
SKI2YLR398C CDC8P00572 216 aa6.83□□□□□ -1.32
SKI2YLR398C SEC66P33754 206 aa6.83□□□□□ -1.32
SKI2YLR398C ILV3P39522 585 aaKnown RBP6.83□□□□□ -1.32
SKI2YLR398C MPH1P40562 993 aa6.83□□□□□ -1.32
SKI2YLR398C EPL1P43572 832 aa6.83□□□□□ -1.32
SKI2YLR398C UBP6P43593 499 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms