RNA–Protein interactions for RNA: YLR224W

YLR224W, Transcript of F-box protein and component of SCF ubiquitin ligase complexes, yeast

Gene YLR224W, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR224W	YLR224W	SKP1	P52286	194 aa		5.37	□□□□□ -1.55
YLR224W	YLR224W	YNR014W	P53719	212 aa		5.37	□□□□□ -1.55
YLR224W	YLR224W	RPC31	P17890	251 aa		5.36	□□□□□ -1.55
YLR224W	YLR224W	KNS1	P32350	737 aa	Predicted RBP	5.36	□□□□□ -1.55
YLR224W	YLR224W	YBR197C	P38306	217 aa		5.36	□□□□□ -1.55
YLR224W	YLR224W	SKN7	P38889	622 aa		5.36	□□□□□ -1.55
YLR224W	YLR224W	BOI2	P39969	1040 aa		5.36	□□□□□ -1.55
YLR224W	YLR224W	MCX1	P38323	520 aa	Predicted RBP	5.35	□□□□□ -1.55
YLR224W	YLR224W	YMR187C	Q03236	431 aa		5.35	□□□□□ -1.55
YLR224W	YLR224W	YPR053C	Q6Q5F3	151 aa		5.35	□□□□□ -1.55
YLR224W	YLR224W	VMA3	P25515	160 aa		5.34	□□□□□ -1.55
YLR224W	YLR224W	SCD5	P34758	872 aa		5.34	□□□□□ -1.55
YLR224W	YLR224W	FOX2	Q02207	900 aa	Known RBP	5.34	□□□□□ -1.55
YLR224W	YLR224W	UTP4	Q06679	776 aa	Known RBP	5.34	□□□□□ -1.55
YLR224W	YLR224W	YDR215C	Q12240	137 aa		5.34	□□□□□ -1.55
YLR224W	YLR224W	TPS3	P38426	1054 aa	Known RBP	5.33	□□□□□ -1.56
YLR224W	YLR224W	ITC1	P53125	1264 aa		5.33	□□□□□ -1.56
YLR224W	YLR224W	SUB2	Q07478	446 aa	Known RBP	5.33	□□□□□ -1.56
YLR224W	YLR224W	MCA1	Q08601	432 aa		5.33	□□□□□ -1.56
YLR224W	YLR224W	MRPL33	P20084	86 aa		5.32	□□□□□ -1.56
YLR224W	YLR224W	PRY1	P47032	299 aa		5.32	□□□□□ -1.56
YLR224W	YLR224W	TRS33	Q99394	268 aa		5.32	□□□□□ -1.56
YLR224W	YLR224W	SSA4	P22202	642 aa	Known RBP	5.31	□□□□□ -1.56
YLR224W	YLR224W	PGM2	P37012	569 aa	Known RBP	5.31	□□□□□ -1.56
YLR224W	YLR224W	BSD2	P38356	321 aa		5.31	□□□□□ -1.56
YLR224W	YLR224W	APM2	P38700	605 aa		5.31	□□□□□ -1.56
YLR224W	YLR224W	ALD4	P46367	519 aa	Known RBP	5.31	□□□□□ -1.56
YLR224W	YLR224W	ISC10	P32645	267 aa		5.3	□□□□□ -1.56
YLR224W	YLR224W	HEH2	Q03281	663 aa		5.3	□□□□□ -1.56
YLR224W	YLR224W	CWC15	Q03772	175 aa	Known RBP	5.3	□□□□□ -1.56
YLR224W	YLR224W	PUN1	Q06991	263 aa		5.3	□□□□□ -1.56
YLR224W	YLR224W	RPP1A	P05318	106 aa	Predicted RBP	5.29	□□□□□ -1.56
YLR224W	YLR224W	SBP1	P10080	294 aa	Known RBP	5.29	□□□□□ -1.56
YLR224W	YLR224W	NAR1	P23503	491 aa	Known RBP	5.29	□□□□□ -1.56
YLR224W	YLR224W	BOI1	P38041	980 aa	Known RBP	5.29	□□□□□ -1.56
YLR224W	YLR224W	NCL1	P38205	684 aa	Known RBP	5.29	□□□□□ -1.56
YLR224W	YLR224W	CWH41	P53008	833 aa		5.29	□□□□□ -1.56
YLR224W	YLR224W	IDI1	P15496	288 aa		5.28	□□□□□ -1.56
YLR224W	YLR224W	KTR2	P33550	425 aa		5.28	□□□□□ -1.56
YLR224W	YLR224W	GAS5	Q08193	484 aa		5.28	□□□□□ -1.56
YLR224W	YLR224W	ALG14	P38242	237 aa		5.27	□□□□□ -1.57
YLR224W	YLR224W	GLT1	Q12680	2145 aa	Known RBP	5.26	□□□□□ -1.57
YLR224W	YLR224W	MET1	P36150	593 aa		5.26	□□□□□ -1.57
YLR224W	YLR224W	AMN1	P38285	549 aa	Predicted RBP	5.26	□□□□□ -1.57
YLR224W	YLR224W	GIS4	Q04233	774 aa		5.26	□□□□□ -1.57
YLR224W	YLR224W	YOR296W	Q08748	1289 aa		5.26	□□□□□ -1.57
YLR224W	YLR224W	MSN1	P22148	382 aa		5.25	□□□□□ -1.57
YLR224W	YLR224W	BUD9	P53226	547 aa		5.25	□□□□□ -1.57
YLR224W	YLR224W	LSB6	P42951	607 aa		5.24	□□□□□ -1.57
YLR224W	YLR224W	PUF6	Q04373	656 aa	Known RBP	5.24	□□□□□ -1.57
YLR224W	YLR224W	SRS2	P12954	1174 aa		5.23	□□□□□ -1.57
YLR224W	YLR224W	LDH1	P38139	375 aa		5.23	□□□□□ -1.57
YLR224W	YLR224W	DYS1	P38791	387 aa		5.23	□□□□□ -1.57
YLR224W	YLR224W	NHA1	Q99271	985 aa		5.23	□□□□□ -1.57
YLR224W	YLR224W	GIP1	P38229	639 aa		5.22	□□□□□ -1.57
YLR224W	YLR224W	PNP1	Q05788	311 aa		5.22	□□□□□ -1.57
YLR224W	YLR224W	EMG1	Q06287	252 aa	Known RBP	5.22	□□□□□ -1.57
YLR224W	YLR224W	TAT1	P38085	619 aa		5.21	□□□□□ -1.58
YLR224W	YLR224W	YER156C	P40093	338 aa	Known RBP	5.21	□□□□□ -1.58
YLR224W	YLR224W	YIL165C	P40446	119 aa		5.21	□□□□□ -1.58
YLR224W	YLR224W	YJL181W	P46987	611 aa		5.21	□□□□□ -1.58
YLR224W	YLR224W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	RIP-Chip
YLR224W	YLR224W	RPB10	P22139	70 aa		5.2	□□□□□ -1.58
YLR224W	YLR224W	BOL3	P39724	118 aa		5.2	□□□□□ -1.58
YLR224W	YLR224W	RGD2	P43556	714 aa		5.2	□□□□□ -1.58
YLR224W	YLR224W	YPL034W	Q03083	165 aa		5.2	□□□□□ -1.58
YLR224W	YLR224W	RRM3	P38766	723 aa		5.19	□□□□□ -1.58
YLR224W	YLR224W	TED1	P40533	473 aa		5.19	□□□□□ -1.58
YLR224W	YLR224W	SUT1	P53032	299 aa	Known RBP	5.19	□□□□□ -1.58
YLR224W	YLR224W	ISW1	P38144	1129 aa		5.18	□□□□□ -1.58
YLR224W	YLR224W	HXT8	P40886	569 aa		5.18	□□□□□ -1.58
YLR224W	YLR224W	SOK2	P53438	785 aa	Predicted RBP	5.18	□□□□□ -1.58
YLR224W	YLR224W	TY4B-P	A0A0B7P3V8	1104 aa		5.17	□□□□□ -1.58
YLR224W	YLR224W	PPT1	P53043	513 aa		5.17	□□□□□ -1.58
YLR224W	YLR224W	APC11	Q12157	165 aa		5.17	□□□□□ -1.58
YLR224W	YLR224W	TY4A-H	Q6Q5P6	413 aa		5.17	□□□□□ -1.58
YLR224W	YLR224W	SSA1	P10591	642 aa	Known RBP	5.16	□□□□□ -1.58
YLR224W	YLR224W	TFA2	P36145	328 aa		5.16	□□□□□ -1.58
YLR224W	YLR224W	GIP2	P40036	548 aa		5.16	□□□□□ -1.58
YLR224W	YLR224W	LSO1	Q3E827	93 aa		5.16	□□□□□ -1.58
YLR224W	YLR224W	AI3	P03877	415 aa		5.14	□□□□□ -1.59
YLR224W	YLR224W	INP51	P40559	946 aa	Known RBP	5.14	□□□□□ -1.59
YLR224W	YLR224W	TIF6	Q12522	245 aa	Known RBP	5.14	□□□□□ -1.59
YLR224W	YLR224W	SAC7	P17121	654 aa		5.13	□□□□□ -1.59
YLR224W	YLR224W	BIO5	P53744	561 aa	Known RBP	5.13	□□□□□ -1.59
YLR224W	YLR224W	ALD3	P54114	506 aa		5.13	□□□□□ -1.59
YLR224W	YLR224W	ALO1	P54783	526 aa	Known RBP	5.13	□□□□□ -1.59
YLR224W	YLR224W	RPL34A	P87262	121 aa	Predicted RBP	5.13	□□□□□ -1.59
YLR224W	YLR224W	RRN6	P32786	894 aa		5.12	□□□□□ -1.59
YLR224W	YLR224W	AIM46	P38885	310 aa		5.12	□□□□□ -1.59
YLR224W	YLR224W	TY1A-NL1	Q12391	440 aa	Known RBP	5.12	□□□□□ -1.59
YLR224W	YLR224W	PGM1	P33401	570 aa	Known RBP	5.11	□□□□□ -1.59
YLR224W	YLR224W	GEF1	P37020	779 aa		5.11	□□□□□ -1.59
YLR224W	YLR224W	NTA1	P40354	457 aa		5.11	□□□□□ -1.59
YLR224W	YLR224W	NAM7	P30771	971 aa	Known RBP	5.1	□□□□□ -1.59
YLR224W	YLR224W	FIR1	P40020	876 aa		5.1	□□□□□ -1.59
YLR224W	YLR224W	FUR4	P05316	633 aa	Known RBP	5.09	□□□□□ -1.59
YLR224W	YLR224W	PAN5	P38787	379 aa		5.09	□□□□□ -1.59
YLR224W	YLR224W	RAD55	P38953	406 aa		5.09	□□□□□ -1.59
YLR224W	YLR224W	ARI1	P53111	347 aa	Known RBP	5.09	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms