RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSF1	YLR087C	YMR018W	Q04364	514 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	RRN11	Q04712	507 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	SEC39	Q12745	709 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	NUF2	P33895	451 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	IMH1	Q06704	911 aa	Known RBP	2.61	□□□□□ -1.99
CSF1	YLR087C	FAR1	P21268	830 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	SNF7	P39929	240 aa	Known RBP	2.61	□□□□□ -1.99
CSF1	YLR087C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
CSF1	YLR087C	INA17	Q02888	182 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	GDE1	Q02979	1223 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	ERV41	Q04651	352 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	RUD3	Q12234	484 aa	Known RBP	2.61	□□□□□ -1.99
CSF1	YLR087C	TRS33	Q99394	268 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	PDR18	P53756	1333 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	XRS2	P33301	854 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	RCK2	P38623	610 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	RBA50	Q04418	439 aa		2.61	□□□□□ -1.99
CSF1	YLR087C	NAT1	P12945	854 aa	Known RBP	2.6	□□□□□ -1.99
CSF1	YLR087C	BTN2	P53286	410 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	ITT1	Q04638	464 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	SNT2	P53127	1403 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	SAP190	P36123	1033 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	SAP185	P40856	1058 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	IMA1	P53051	589 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	LHP1	P33399	275 aa	Known RBP	2.6	□□□□□ -1.99
CSF1	YLR087C	HXT6	P39003	570 aa	Known RBP	2.6	□□□□□ -1.99
CSF1	YLR087C	HXT7	P39004	570 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	GUP1	P53154	560 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	ADE6	P38972	1358 aa	Known RBP	2.6	□□□□□ -1.99
CSF1	YLR087C	SNF2	P22082	1703 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	ROM2	P51862	1356 aa	Known RBP	2.6	□□□□□ -1.99
CSF1	YLR087C	SMY2	P32909	740 aa	Known RBP	2.6	□□□□□ -1.99
CSF1	YLR087C	GUP2	Q08929	609 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	MLP1	Q02455	1875 aa	Known RBP	2.6	□□□□□ -1.99
CSF1	YLR087C	TAL1	P15019	335 aa	Known RBP	2.6	□□□□□ -1.99
CSF1	YLR087C	NPL6	P32832	435 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	ATG29	Q12092	213 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	FUM1	P08417	488 aa	Known RBP	2.6	□□□□□ -1.99
CSF1	YLR087C	RAP1	P11938	827 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	PDC5	P16467	563 aa	Known RBP	2.6	□□□□□ -1.99
CSF1	YLR087C	KIC1	P38692	1080 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	CIN5	P40917	295 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	EIS1	Q05050	843 aa	Known RBP	2.6	□□□□□ -1.99
CSF1	YLR087C	URA7	P28274	579 aa	Known RBP	2.6	□□□□□ -1.99
CSF1	YLR087C	EXO84	P38261	753 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	GPR1	Q12361	961 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	LYS2	P07702	1392 aa		2.6	□□□□□ -1.99
CSF1	YLR087C	RPS3	P05750	240 aa	Known RBP	2.59	□□□□□ -1.99
CSF1	YLR087C	RPB2	P08518	1224 aa	Known RBP	2.59	□□□□□ -1.99
CSF1	YLR087C	DSE1	P40077	573 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	RLP7	P40693	322 aa	Known RBP	2.59	□□□□□ -1.99
CSF1	YLR087C	JJJ1	P53863	590 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
CSF1	YLR087C	SPO77	Q06134	477 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
CSF1	YLR087C	HCA4	P20448	770 aa	Known RBP	2.59	□□□□□ -1.99
CSF1	YLR087C	ARG1	P22768	420 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	SEC6	P32844	805 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	MKS1	P34072	584 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	HSM3	P38348	480 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	GLE1	Q12315	538 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	SPB1	P25582	841 aa	Predicted RBP	2.59	□□□□□ -1.99
CSF1	YLR087C	SWC3	P31376	625 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	PPG1	P32838	368 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	PAF1	P38351	445 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	TSR2	Q06672	205 aa	Known RBP	2.59	□□□□□ -1.99
CSF1	YLR087C	BPT1	P14772	1559 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	VPS15	P22219	1454 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	BUD14	P27637	709 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	YME1	P32795	747 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	TBS1	P38114	1094 aa		2.59	□□□□□ -1.99
CSF1	YLR087C	CIC1	P38779	376 aa	Known RBP	2.59	□□□□□ -1.99
CSF1	YLR087C	ROK1	P45818	564 aa	Predicted RBP	2.59	□□□□□ -1.99
CSF1	YLR087C	YNL040W	P53960	456 aa	Predicted RBP	2.59	□□□□□ -1.99
CSF1	YLR087C	NOP8	Q08287	484 aa	Predicted RBP	2.59	□□□□□ -1.99
CSF1	YLR087C	RTC5	Q12108	567 aa	Known RBP	2.59	□□□□□ -1.99
CSF1	YLR087C	YRA1	Q12159	226 aa	Known RBP	2.59	□□□□□ -1.99
CSF1	YLR087C	LTE1	P07866	1435 aa		2.59	□□□□□ -2
CSF1	YLR087C	SEC2	P17065	759 aa		2.59	□□□□□ -2
CSF1	YLR087C	PET309	P32522	965 aa	Predicted RBP	2.59	□□□□□ -2
CSF1	YLR087C	MIC60	P36112	540 aa		2.59	□□□□□ -2
CSF1	YLR087C	RSC30	P38781	883 aa		2.59	□□□□□ -2
CSF1	YLR087C	SEC1	P30619	724 aa	Known RBP	2.59	□□□□□ -2
CSF1	YLR087C	MCM4	P30665	933 aa	Known RBP	2.59	□□□□□ -2
CSF1	YLR087C	POL5	P39985	1022 aa	Known RBP	2.59	□□□□□ -2
CSF1	YLR087C	TY4A-J	P47023	414 aa		2.59	□□□□□ -2
CSF1	YLR087C	CRR1	Q05790	422 aa		2.59	□□□□□ -2
CSF1	YLR087C	PDR8	Q06149	701 aa		2.59	□□□□□ -2
CSF1	YLR087C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	2.59	□□□□□ -2	not detected
CSF1	YLR087C	PEX14	P53112	341 aa		2.59	□□□□□ -2
CSF1	YLR087C	KTR6	P54070	446 aa		2.59	□□□□□ -2
CSF1	YLR087C	GRX3	Q03835	250 aa		2.59	□□□□□ -2
CSF1	YLR087C	ARR1	Q06596	294 aa		2.59	□□□□□ -2
CSF1	YLR087C	YCG1	Q06680	1035 aa		2.59	□□□□□ -2
CSF1	YLR087C	YKL050C	P35736	922 aa		2.58	□□□□□ -2
CSF1	YLR087C	CBR1	P38626	284 aa	Known RBP	2.58	□□□□□ -2
CSF1	YLR087C	YER137C	P40083	148 aa	Known RBP	2.58	□□□□□ -2
CSF1	YLR087C	CTR9	P89105	1077 aa		2.58	□□□□□ -2
CSF1	YLR087C	MYO5	Q04439	1219 aa	Known RBP	2.58	□□□□□ -2
CSF1	YLR087C	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	RIP-Chip

Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms