RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W MET32Q12041 191 aa2.04□□□□□ -2.08
SMC4YLR086W PIN2Q12057 282 aa2.04□□□□□ -2.08
SMC4YLR086W HXK1P04806 485 aaKnown RBP2.04□□□□□ -2.08
SMC4YLR086W KAP122P32767 1081 aa2.04□□□□□ -2.08
SMC4YLR086W DLD3P39976 496 aaKnown RBP2.04□□□□□ -2.08
SMC4YLR086W NUP85P46673 744 aa2.04□□□□□ -2.08
SMC4YLR086W JJJ2P46997 583 aa2.04□□□□□ -2.08
SMC4YLR086W LDH1P38139 375 aa2.03□□□□□ -2.08
SMC4YLR086W DFG5Q05031 458 aa2.03□□□□□ -2.08
SMC4YLR086W SIS1P25294 352 aaKnown RBP2.03□□□□□ -2.08
SMC4YLR086W MET10P39692 1035 aa2.03□□□□□ -2.08
SMC4YLR086W ESF1Q06344 628 aaKnown RBP2.03□□□□□ -2.08
SMC4YLR086W IRE1P32361 1115 aa2.03□□□□□ -2.08
SMC4YLR086W SEC8P32855 1065 aa2.03□□□□□ -2.08
SMC4YLR086W MCD1Q12158 566 aa2.03□□□□□ -2.08
SMC4YLR086W FLP1P03870 423 aa2.03□□□□□ -2.09
SMC4YLR086W HVG1P0CE11 249 aa2.03□□□□□ -2.09
SMC4YLR086W ISW1P38144 1129 aa2.03□□□□□ -2.09
SMC4YLR086W GIP1P38229 639 aa2.03□□□□□ -2.09
SMC4YLR086W DAK2P43550 591 aa2.03□□□□□ -2.09
SMC4YLR086W APP1P53933 587 aa2.03□□□□□ -2.09
SMC4YLR086W NOG1Q02892 647 aaKnown RBP2.03□□□□□ -2.09
SMC4YLR086W PUS5Q06244 254 aa2.03□□□□□ -2.09
SMC4YLR086W DAT1P13483 248 aaKnown RBP2.02□□□□□ -2.09
SMC4YLR086W CYC8P14922 966 aa2.02□□□□□ -2.09
SMC4YLR086W MSN1P22148 382 aa2.02□□□□□ -2.09
SMC4YLR086W SCT1P32784 759 aa2.02□□□□□ -2.09
SMC4YLR086W SHM1P37292 490 aaPredicted RBP2.02□□□□□ -2.09
SMC4YLR086W UBP15P50101 1230 aa2.02□□□□□ -2.09
SMC4YLR086W HEH2Q03281 663 aa2.02□□□□□ -2.09
SMC4YLR086W BSC2Q05611 235 aa2.02□□□□□ -2.09
SMC4YLR086W CLN2P20438 545 aa2.02□□□□□ -2.09
SMC4YLR086W MLF3P32047 452 aa2.02□□□□□ -2.09
SMC4YLR086W RIM11P38615 370 aa2.02□□□□□ -2.09
SMC4YLR086W PSY2P40164 858 aa2.02□□□□□ -2.09
SMC4YLR086W YPL109CQ02981 657 aa2.02□□□□□ -2.09
SMC4YLR086W YCS4Q06156 1176 aa2.02□□□□□ -2.09
SMC4YLR086W KAR2P16474 682 aaKnown RBP2.02□□□□□ -2.09
SMC4YLR086W YGR053CP53234 283 aa2.02□□□□□ -2.09
SMC4YLR086W CTR9P89105 1077 aa2.02□□□□□ -2.09
SMC4YLR086W VPS16Q03308 798 aa2.02□□□□□ -2.09
SMC4YLR086W MAG2Q06436 670 aaKnown RBP2.02□□□□□ -2.09
SMC4YLR086W GLY1P37303 387 aaKnown RBP2.01□□□□□ -2.09
SMC4YLR086W ARL1P38116 183 aaKnown RBP2.01□□□□□ -2.09
SMC4YLR086W RAD55P38953 406 aa2.01□□□□□ -2.09
SMC4YLR086W RVS167P39743 482 aaKnown RBP2.01□□□□□ -2.09
SMC4YLR086W YNL165WP53891 406 aa2.01□□□□□ -2.09
SMC4YLR086W RGP1P16664 663 aa2.01□□□□□ -2.09
SMC4YLR086W YIL165CP40446 119 aa2.01□□□□□ -2.09
SMC4YLR086W NOC3Q07896 663 aaPredicted RBP2.01□□□□□ -2.09
SMC4YLR086W OXR1Q08952 273 aa2.01□□□□□ -2.09
SMC4YLR086W TY1A-DR3Q12441 440 aa2.01□□□□□ -2.09
SMC4YLR086W RAD2P07276 1031 aa2.01□□□□□ -2.09
SMC4YLR086W RPB10P22139 70 aa2.01□□□□□ -2.09
SMC4YLR086W PDC6P26263 563 aaKnown RBP2.01□□□□□ -2.09
SMC4YLR086W AMN1P38285 549 aaPredicted RBP2.01□□□□□ -2.09
SMC4YLR086W NMD2P38798 1089 aaKnown RBP2.01□□□□□ -2.09
SMC4YLR086W LEM3P42838 414 aa2.01□□□□□ -2.09
SMC4YLR086W YJR098CP47139 656 aa2.01□□□□□ -2.09
SMC4YLR086W GNP1P48813 663 aa2.01□□□□□ -2.09
SMC4YLR086W PSH1Q12161 406 aa2.01□□□□□ -2.09
SMC4YLR086W TIF6Q12522 245 aaKnown RBP2.01□□□□□ -2.09
SMC4YLR086W CDC19P00549 500 aaKnown RBP2□□□□□ -2.09
SMC4YLR086W APM2P38700 605 aa2□□□□□ -2.09
SMC4YLR086W TAT2P38967 592 aa2□□□□□ -2.09
SMC4YLR086W QDR2P40474 542 aa2□□□□□ -2.09
SMC4YLR086W PTK2P47116 818 aaKnown RBP2□□□□□ -2.09
SMC4YLR086W NUT1P53114 1132 aa2□□□□□ -2.09
SMC4YLR086W RSC2Q06488 889 aa2□□□□□ -2.09
SMC4YLR086W Q0182Q9ZZW1 134 aa2□□□□□ -2.09
SMC4YLR086W SEC23P15303 768 aaKnown RBP2□□□□□ -2.09
SMC4YLR086W PRE9P23638 258 aaKnown RBP2□□□□□ -2.09
SMC4YLR086W ASH1P34233 588 aa2□□□□□ -2.09
SMC4YLR086W FIR1P40020 876 aa2□□□□□ -2.09
SMC4YLR086W YTA6P40328 754 aa2□□□□□ -2.09
SMC4YLR086W LSC2P53312 427 aa2□□□□□ -2.09
SMC4YLR086W ADI1Q03677 179 aa2□□□□□ -2.09
SMC4YLR086W PMT7Q06644 662 aa2□□□□□ -2.09
SMC4YLR086W YDR461C-AQ2V2P7 80 aa2□□□□□ -2.09
SMC4YLR086W RDH54P38086 958 aa2□□□□□ -2.09
SMC4YLR086W ITC1P53125 1264 aa2□□□□□ -2.09
SMC4YLR086W HST3P53687 447 aa2□□□□□ -2.09
SMC4YLR086W OYE2Q03558 400 aaKnown RBP2□□□□□ -2.09
SMC4YLR086W EMG1Q06287 252 aaKnown RBP2□□□□□ -2.09
SMC4YLR086W COBP00163 385 aa2□□□□□ -2.09
SMC4YLR086W CDC34P14682 295 aa2□□□□□ -2.09
SMC4YLR086W UGA3P26370 528 aa2□□□□□ -2.09
SMC4YLR086W AHP1P38013 176 aaKnown RBP2□□□□□ -2.09
SMC4YLR086W FYV10P40492 516 aa2□□□□□ -2.09
SMC4YLR086W KRI1P42846 591 aaKnown RBP2□□□□□ -2.09
SMC4YLR086W UBP2Q01476 1272 aa2□□□□□ -2.09
SMC4YLR086W RPN4Q03465 531 aa2□□□□□ -2.09
SMC4YLR086W PRP40P33203 583 aaKnown RBP1.99□□□□□ -2.09
SMC4YLR086W DUT1P33317 147 aa1.99□□□□□ -2.09
SMC4YLR086W SOG2Q08817 791 aa1.99□□□□□ -2.09
SMC4YLR086W TMA46Q12000 345 aaKnown RBP1.99□□□□□ -2.09
SMC4YLR086W RPT1P33299 467 aaKnown RBP1.99□□□□□ -2.09
SMC4YLR086W MRPS18P42847 217 aa1.99□□□□□ -2.09
SMC4YLR086W RKM2Q03942 479 aa1.99□□□□□ -2.09
SMC4YLR086W MET1P36150 593 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms