RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C URB1P34241 1764 aaKnown RBP6.7□□□□□ -1.34
SSK1YLR006C TY4B-PA0A0B7P3V8 1104 aa6.7□□□□□ -1.34
SSK1YLR006C THS1P04801 734 aaKnown RBP6.7□□□□□ -1.34
SSK1YLR006C SRS2P12954 1174 aa6.7□□□□□ -1.34
SSK1YLR006C TRX2P22803 104 aaKnown RBP6.7□□□□□ -1.34
SSK1YLR006C RFC1P38630 861 aaKnown RBP6.7□□□□□ -1.34
SSK1YLR006C IES2P40154 320 aa6.7□□□□□ -1.34
SSK1YLR006C YJL007CP47080 104 aa6.7□□□□□ -1.34
SSK1YLR006C JIP5Q06214 492 aaPredicted RBP6.7□□□□□ -1.34
SSK1YLR006C IMH1Q06704 911 aaKnown RBP6.7□□□□□ -1.34
SSK1YLR006C PLP2Q12017 286 aa6.7□□□□□ -1.34
SSK1YLR006C TY4A-HQ6Q5P6 413 aa6.7□□□□□ -1.34
SSK1YLR006C YIL055CP40523 627 aaKnown RBP6.69□□□□□ -1.34
SSK1YLR006C YNL050CP53952 270 aa6.69□□□□□ -1.34
SSK1YLR006C YDR341CQ05506 607 aaKnown RBP6.69□□□□□ -1.34
SSK1YLR006C SVF1Q05515 481 aa6.69□□□□□ -1.34
SSK1YLR006C YLR257WQ06146 321 aaKnown RBP6.69□□□□□ -1.34
SSK1YLR006C LSP1Q12230 341 aaKnown RBP6.69□□□□□ -1.34
SSK1YLR006C TIF1P10081 395 aaKnown RBP6.68□□□□□ -1.34
SSK1YLR006C DLD1P32891 587 aa6.68□□□□□ -1.34
SSK1YLR006C BUD6P41697 788 aa6.68□□□□□ -1.34
SSK1YLR006C CTF4Q01454 927 aa6.68□□□□□ -1.34
SSK1YLR006C MDM1Q01846 1127 aa6.68□□□□□ -1.34
SSK1YLR006C EDE1P34216 1381 aa6.68□□□□□ -1.34
SSK1YLR006C VMA1P17255 1071 aaKnown RBP6.68□□□□□ -1.34
SSK1YLR006C HOS2P53096 452 aaPredicted RBP6.68□□□□□ -1.34
SSK1YLR006C YGL081WP53156 320 aa6.68□□□□□ -1.34
SSK1YLR006C STB3Q12427 513 aa6.68□□□□□ -1.34
SSK1YLR006C HSP104P31539 908 aaKnown RBP6.67□□□□□ -1.34
SSK1YLR006C YPP1P46951 817 aa6.67□□□□□ -1.34
SSK1YLR006C TEA1P47988 759 aa6.67□□□□□ -1.34
SSK1YLR006C CLF1Q12309 687 aaPredicted RBP6.67□□□□□ -1.34
SSK1YLR006C RAD51P25454 400 aa6.67□□□□□ -1.34
SSK1YLR006C RPN12P32496 274 aa6.67□□□□□ -1.34
SSK1YLR006C HXT5P38695 592 aa6.67□□□□□ -1.34
SSK1YLR006C MAM1P40065 302 aa6.67□□□□□ -1.34
SSK1YLR006C YNL058CP53947 316 aa6.67□□□□□ -1.34
SSK1YLR006C BMS1Q08965 1183 aaKnown RBP6.67□□□□□ -1.34
SSK1YLR006C NTH2P35172 780 aa6.66□□□□□ -1.34
SSK1YLR006C PRP43P53131 767 aaKnown RBP6.66□□□□□ -1.34
SSK1YLR006C REB1P21538 810 aa6.65□□□□□ -1.34
SSK1YLR006C RKM3P38222 552 aa6.65□□□□□ -1.34
SSK1YLR006C UBP12P39538 1254 aa6.65□□□□□ -1.34
SSK1YLR006C MEP1P40260 492 aa6.65□□□□□ -1.34
SSK1YLR006C YJR142WP47173 342 aa6.65□□□□□ -1.34
SSK1YLR006C CFT2Q12102 859 aaPredicted RBP6.65□□□□□ -1.34
SSK1YLR006C NUP145P49687 1317 aa6.65□□□□□ -1.34
SSK1YLR006C COQ4O13525 335 aa6.65□□□□□ -1.35
SSK1YLR006C PUP1P25043 261 aa6.65□□□□□ -1.35
SSK1YLR006C KNS1P32350 737 aaPredicted RBP6.65□□□□□ -1.35
SSK1YLR006C NPL4P33755 580 aa6.65□□□□□ -1.35
SSK1YLR006C ATG1P53104 897 aa6.65□□□□□ -1.35
SSK1YLR006C YGR122WP53272 402 aa6.65□□□□□ -1.35
SSK1YLR006C GCR2Q01722 534 aa6.65□□□□□ -1.35
SSK1YLR006C RCF1Q03713 159 aa6.65□□□□□ -1.35
SSK1YLR006C BDP1P46678 594 aa6.64□□□□□ -1.35
SSK1YLR006C COG8Q04632 607 aa6.64□□□□□ -1.35
SSK1YLR006C HEL2Q05580 639 aaKnown RBP6.64□□□□□ -1.35
SSK1YLR006C DUR1,2P32528 1835 aaKnown RBP6.64□□□□□ -1.35
SSK1YLR006C RAD24P32641 659 aa6.64□□□□□ -1.35
SSK1YLR006C TPS3P38426 1054 aaKnown RBP6.64□□□□□ -1.35
SSK1YLR006C BFA1P47113 574 aa6.64□□□□□ -1.35
SSK1YLR006C AOS1Q06624 347 aa6.64□□□□□ -1.35
SSK1YLR006C NOT3P06102 836 aaKnown RBP6.63□□□□□ -1.35
SSK1YLR006C RTG2P32608 588 aaKnown RBP6.63□□□□□ -1.35
SSK1YLR006C HXT13P39924 564 aa6.63□□□□□ -1.35
SSK1YLR006C SEC27P41811 889 aaKnown RBP6.63□□□□□ -1.35
SSK1YLR006C TCB2P48231 1178 aa6.63□□□□□ -1.35
SSK1YLR006C RPN4Q03465 531 aa6.63□□□□□ -1.35
SSK1YLR006C RPS19AP07280 144 aaKnown RBP6.62□□□□□ -1.35
SSK1YLR006C RPS19BP07281 144 aaPredicted RBP6.62□□□□□ -1.35
SSK1YLR006C HSC82P15108 705 aaKnown RBP6.62□□□□□ -1.35
SSK1YLR006C PEA2P40091 420 aa6.62□□□□□ -1.35
SSK1YLR006C ALD3P54114 506 aa6.62□□□□□ -1.35
SSK1YLR006C POB3Q04636 552 aaKnown RBP6.62□□□□□ -1.35
SSK1YLR006C PSR1Q07800 427 aa6.62□□□□□ -1.35
SSK1YLR006C WHI5Q12416 295 aa6.62□□□□□ -1.35
SSK1YLR006C CDC11P32458 415 aa6.62□□□□□ -1.35
SSK1YLR006C RSM7P47150 247 aa6.62□□□□□ -1.35
SSK1YLR006C HXT17P53631 564 aa6.62□□□□□ -1.35
SSK1YLR006C IRC3Q06683 689 aa6.62□□□□□ -1.35
SSK1YLR006C MSC6Q08818 692 aaKnown RBP6.62□□□□□ -1.35
SSK1YLR006C VAS1P07806 1104 aaKnown RBP6.61□□□□□ -1.35
SSK1YLR006C SWI3P32591 825 aa6.61□□□□□ -1.35
SSK1YLR006C NPA3P47122 385 aa6.61□□□□□ -1.35
SSK1YLR006C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
SSK1YLR006C VPS20Q04272 221 aa6.61□□□□□ -1.35
SSK1YLR006C HSP42Q12329 375 aa6.61□□□□□ -1.35
SSK1YLR006C SRP40P32583 406 aaPredicted RBP6.61□□□□□ -1.35
SSK1YLR006C GPI8P49018 411 aa6.61□□□□□ -1.35
SSK1YLR006C CTR9P89105 1077 aa6.61□□□□□ -1.35
SSK1YLR006C MTC5Q03897 1148 aa6.61□□□□□ -1.35
SSK1YLR006C RRP9Q06506 573 aaKnown RBP6.61□□□□□ -1.35
SSK1YLR006C ROM2P51862 1356 aaKnown RBP6.6□□□□□ -1.35
SSK1YLR006C RNR2P09938 399 aaKnown RBP6.6□□□□□ -1.35
SSK1YLR006C MPH2P0CD99 609 aa6.6□□□□□ -1.35
SSK1YLR006C MPH3P0CE00 602 aa6.6□□□□□ -1.35
SSK1YLR006C YDJ1P25491 409 aaKnown RBP6.6□□□□□ -1.35
SSK1YLR006C SWC3P31376 625 aa6.6□□□□□ -1.35
SSK1YLR006C SEC8P32855 1065 aa6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 116.4 ms