RNA–Protein interactions for RNA: YKR082W

NUP133, Transcript of Subunit of Nup84p subcomplex of nuclear pore complex (NPC), yeast

Gene NUP133, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP133	YKR082W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-JR1	P47098	1755 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-ER1	Q03612	1755 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-GR2	Q12269	1755 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-OL	Q12273	1755 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	TY1B-PL	Q12414	1755 aa	Known RBP	4.64	□□□□□ -1.67
NUP133	YKR082W	GEA1	P47102	1408 aa	Predicted RBP	4.64	□□□□□ -1.67
NUP133	YKR082W	ACE2	P21192	770 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	RRP8	P38961	392 aa	Known RBP	4.64	□□□□□ -1.67
NUP133	YKR082W	CAJ1	P39101	391 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	SPO20	Q04359	397 aa		4.64	□□□□□ -1.67
NUP133	YKR082W	RPN7	Q06103	429 aa	Known RBP	4.64	□□□□□ -1.67
NUP133	YKR082W	PIF1	P07271	859 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	PUP1	P25043	261 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	LTV1	P34078	463 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	RXT2	P38255	430 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	SMD2	Q06217	110 aa	Known RBP	4.63	□□□□□ -1.67
NUP133	YKR082W	KAR3	P17119	729 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	VMA1	P17255	1071 aa	Known RBP	4.63	□□□□□ -1.67
NUP133	YKR082W	MSM1	P22438	575 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	IME2	P32581	645 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	YKL100C	P34248	587 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	RIP-Chip
NUP133	YKR082W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
NUP133	YKR082W	RAD4	P14736	754 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
NUP133	YKR082W	YKL091C	P33324	310 aa	Known RBP	4.63	□□□□□ -1.67
NUP133	YKR082W	RPG1	P38249	964 aa	Known RBP	4.63	□□□□□ -1.67
NUP133	YKR082W	GCD10	P41814	478 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	EMP47	P43555	445 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	YJL007C	P47080	104 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	POL32	P47110	350 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	MPC54	Q08550	464 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	TY3B-G	Q99315	1547 aa		4.63	□□□□□ -1.67
NUP133	YKR082W	CDC31	P06704	161 aa	Known RBP	4.62	□□□□□ -1.67
NUP133	YKR082W	TRL1	P09880	827 aa	Known RBP	4.62	□□□□□ -1.67
NUP133	YKR082W	URA1	P28272	314 aa	Predicted RBP	4.62	□□□□□ -1.67
NUP133	YKR082W	VPS41	P38959	992 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	MNN1	P39106	762 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	IRR1	P40541	1150 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	ALD3	P54114	506 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	TY1B-BR	Q12193	1756 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	TY1B-GR3	Q12316	1755 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	TY1B-OR	Q92393	1755 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	SEC8	P32855	1065 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
NUP133	YKR082W	UBP14	P38237	781 aa	Known RBP	4.62	□□□□□ -1.67
NUP133	YKR082W	VPS29	P38759	282 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	TAT2	P38967	592 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	AOS1	Q06624	347 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	BMS1	Q08965	1183 aa	Known RBP	4.62	□□□□□ -1.67
NUP133	YKR082W	YAH1	Q12184	172 aa	Known RBP	4.62	□□□□□ -1.67
NUP133	YKR082W	MTC2	P34246	357 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	TPS3	P38426	1054 aa	Known RBP	4.62	□□□□□ -1.67
NUP133	YKR082W	DAK2	P43550	591 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	RSC8	P43609	557 aa	Known RBP	4.62	□□□□□ -1.67
NUP133	YKR082W	VID30	P53076	958 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	FOL1	P53848	824 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	DBP9	Q06218	594 aa	Known RBP	4.62	□□□□□ -1.67
NUP133	YKR082W	GGA1	Q06336	557 aa		4.62	□□□□□ -1.67
NUP133	YKR082W	SPS1	P08458	490 aa		4.61	□□□□□ -1.67
NUP133	YKR082W	UGA3	P26370	528 aa		4.61	□□□□□ -1.67
NUP133	YKR082W	RAD27	P26793	382 aa		4.61	□□□□□ -1.67
NUP133	YKR082W	YBL028C	P38202	106 aa		4.61	□□□□□ -1.67
NUP133	YKR082W	ETP1	P38748	585 aa	Known RBP	4.61	□□□□□ -1.67
NUP133	YKR082W	RRB1	Q04225	511 aa	Known RBP	4.61	□□□□□ -1.67
NUP133	YKR082W	UTP13	Q05946	817 aa	Known RBP	4.61	□□□□□ -1.67
NUP133	YKR082W	SLX4	Q12098	748 aa		4.61	□□□□□ -1.67
NUP133	YKR082W	WHI5	Q12416	295 aa		4.61	□□□□□ -1.67
NUP133	YKR082W	TCB1	Q12466	1186 aa		4.61	□□□□□ -1.67
NUP133	YKR082W	ERG12	P07277	443 aa		4.61	□□□□□ -1.67
NUP133	YKR082W	ATG19	P35193	415 aa		4.61	□□□□□ -1.67
NUP133	YKR082W	APL2	P36000	726 aa	Predicted RBP	4.61	□□□□□ -1.67
NUP133	YKR082W	MAM1	P40065	302 aa		4.61	□□□□□ -1.67
NUP133	YKR082W	YNL247W	P53852	767 aa	Known RBP	4.61	□□□□□ -1.67
NUP133	YKR082W	PPM2	Q08282	695 aa		4.61	□□□□□ -1.67
NUP133	YKR082W	HOM3	P10869	527 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	RTG3	P38165	486 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	YEN1	P40028	759 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	PEX21	P50091	288 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	YML083C	Q04526	418 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	YLR352W	Q06479	807 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	DPH6	Q12429	685 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	TSC11	P40061	1430 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	TUF1	P02992	437 aa	Known RBP	4.6	□□□□□ -1.67
NUP133	YKR082W	MRPL25	P23369	157 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	DAL80	P26343	269 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	IMP2'	P32351	346 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	ACP1	P32463	125 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	DOT6	P40059	670 aa	Known RBP	4.6	□□□□□ -1.67
NUP133	YKR082W	FPK1	P53739	893 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	KAR5	Q04746	504 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	PIN2	Q12057	282 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	MCM2	P29469	868 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	VPH1	P32563	840 aa	Known RBP	4.6	□□□□□ -1.67
NUP133	YKR082W	ECM32	P32644	1121 aa	Known RBP	4.6	□□□□□ -1.67
NUP133	YKR082W	PEX6	P33760	1030 aa		4.6	□□□□□ -1.67
NUP133	YKR082W	YKL050C	P35736	922 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms