RNA–Protein interactions for RNA: YKR026C

GCN3, Transcript of Alpha subunit of translation initiation factor eIF2B, yeast

Gene GCN3, Length 918 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCN3	YKR026C	YRF1-7	P0CX15	1859 aa		7.6	□□□□□ -1.19
GCN3	YKR026C	YRF1-6	P53819	1859 aa		7.6	□□□□□ -1.19
GCN3	YKR026C	SAC3	P46674	1301 aa		7.6	□□□□□ -1.19
GCN3	YKR026C	DID4	P36108	232 aa		7.6	□□□□□ -1.19
GCN3	YKR026C	LAM6	Q08001	693 aa		7.6	□□□□□ -1.19
GCN3	YKR026C	SSK22	P25390	1331 aa	Predicted RBP	7.59	□□□□□ -1.19
GCN3	YKR026C	ARG8	P18544	423 aa		7.59	□□□□□ -1.19
GCN3	YKR026C	MCM2	P29469	868 aa		7.59	□□□□□ -1.19
GCN3	YKR026C	PRP40	P33203	583 aa	Known RBP	7.59	□□□□□ -1.19
GCN3	YKR026C	MPE1	P35728	441 aa	Known RBP	7.59	□□□□□ -1.19
GCN3	YKR026C	KTR3	P38130	404 aa	Predicted RBP	7.59	□□□□□ -1.19
GCN3	YKR026C	YKE2	P52553	114 aa		7.59	□□□□□ -1.19
GCN3	YKR026C	TSR3	Q12094	313 aa	Known RBP	7.59	□□□□□ -1.19
GCN3	YKR026C	COB	P00163	385 aa		7.58	□□□□□ -1.2
GCN3	YKR026C	MATALPHA2	P0CY08	210 aa		7.58	□□□□□ -1.2
GCN3	YKR026C	HMLALPHA2	P0CY09	210 aa		7.58	□□□□□ -1.2
GCN3	YKR026C	TPM2	P40414	161 aa		7.58	□□□□□ -1.2
GCN3	YKR026C	EPS1	P40557	701 aa		7.58	□□□□□ -1.2
GCN3	YKR026C	YPL150W	Q12152	901 aa		7.58	□□□□□ -1.2
GCN3	YKR026C	CPA2	P03965	1118 aa	Known RBP	7.57	□□□□□ -1.2
GCN3	YKR026C	PIF1	P07271	859 aa		7.57	□□□□□ -1.2
GCN3	YKR026C	SEC18	P18759	758 aa	Known RBP	7.57	□□□□□ -1.2
GCN3	YKR026C	NPR3	P38742	1146 aa		7.57	□□□□□ -1.2
GCN3	YKR026C	CIC1	P38779	376 aa	Known RBP	7.57	□□□□□ -1.2
GCN3	YKR026C	NPR2	P39923	615 aa		7.57	□□□□□ -1.2
GCN3	YKR026C	BUD6	P41697	788 aa		7.57	□□□□□ -1.2
GCN3	YKR026C	ESF1	Q06344	628 aa	Known RBP	7.57	□□□□□ -1.2
GCN3	YKR026C	TUM1	Q08686	304 aa	Known RBP	7.57	□□□□□ -1.2
GCN3	YKR026C	SSF2	Q12153	453 aa	Predicted RBP	7.57	□□□□□ -1.2
GCN3	YKR026C	DDP1	Q99321	188 aa	Known RBP	7.57	□□□□□ -1.2
GCN3	YKR026C	CYC8	P14922	966 aa		7.56	□□□□□ -1.2
GCN3	YKR026C	PEP3	P27801	918 aa		7.56	□□□□□ -1.2
GCN3	YKR026C	SLA1	P32790	1244 aa		7.56	□□□□□ -1.2
GCN3	YKR026C	YBL086C	P38177	466 aa		7.56	□□□□□ -1.2
GCN3	YKR026C	STU2	P46675	888 aa		7.56	□□□□□ -1.2
GCN3	YKR026C	PIB2	P53191	635 aa		7.56	□□□□□ -1.2
GCN3	YKR026C	UBP10	P53874	792 aa	Predicted RBP	7.56	□□□□□ -1.2
GCN3	YKR026C	FCP1	Q03254	732 aa		7.56	□□□□□ -1.2
GCN3	YKR026C	QCR6	P00127	147 aa		7.55	□□□□□ -1.2
GCN3	YKR026C	FRS2	P15625	503 aa	Known RBP	7.55	□□□□□ -1.2
GCN3	YKR026C	RDS1	P25611	832 aa		7.55	□□□□□ -1.2
GCN3	YKR026C	FBP26	P32604	452 aa		7.55	□□□□□ -1.2
GCN3	YKR026C	SER1	P33330	395 aa	Known RBP	7.55	□□□□□ -1.2
GCN3	YKR026C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	7.55	□□□□□ -1.2	not detected
GCN3	YKR026C	LEO1	P38439	464 aa		7.55	□□□□□ -1.2
GCN3	YKR026C	VID28	P40547	921 aa		7.55	□□□□□ -1.2
GCN3	YKR026C	HXT10	P43581	546 aa		7.55	□□□□□ -1.2
GCN3	YKR026C	LYS4	P49367	693 aa	Predicted RBP	7.55	□□□□□ -1.2
GCN3	YKR026C	SGD1	Q06132	899 aa		7.55	□□□□□ -1.2
GCN3	YKR026C	RRI2	Q12348	645 aa		7.55	□□□□□ -1.2
GCN3	YKR026C	PGI1	P12709	554 aa	Known RBP	7.54	□□□□□ -1.2
GCN3	YKR026C	MET1	P36150	593 aa		7.54	□□□□□ -1.2
GCN3	YKR026C	YKR075C	P36155	307 aa		7.54	□□□□□ -1.2
GCN3	YKR026C	UGA2	P38067	497 aa		7.54	□□□□□ -1.2
GCN3	YKR026C	RFC5	P38251	354 aa		7.54	□□□□□ -1.2
GCN3	YKR026C	RRM3	P38766	723 aa		7.54	□□□□□ -1.2
GCN3	YKR026C	ENT3	P47160	408 aa		7.54	□□□□□ -1.2
GCN3	YKR026C	YGL082W	P53155	381 aa		7.54	□□□□□ -1.2
GCN3	YKR026C	FAR11	P53917	953 aa		7.54	□□□□□ -1.2
GCN3	YKR026C	RPN7	Q06103	429 aa	Known RBP	7.54	□□□□□ -1.2
GCN3	YKR026C	ADR1	P07248	1323 aa		7.53	□□□□□ -1.2
GCN3	YKR026C	DCD1	P06773	312 aa		7.53	□□□□□ -1.2
GCN3	YKR026C	SES1	P07284	462 aa	Known RBP	7.53	□□□□□ -1.2
GCN3	YKR026C	ATE1	P16639	503 aa		7.53	□□□□□ -1.2
GCN3	YKR026C	MAL33	P38157	468 aa		7.53	□□□□□ -1.2
GCN3	YKR026C	TFG2	P41896	400 aa	Predicted RBP	7.53	□□□□□ -1.2
GCN3	YKR026C	BBC1	P47068	1157 aa		7.53	□□□□□ -1.2
GCN3	YKR026C	ALD2	P47771	506 aa		7.53	□□□□□ -1.2
GCN3	YKR026C	YNL193W	P53870	558 aa		7.53	□□□□□ -1.2
GCN3	YKR026C	HOS3	Q02959	697 aa	Known RBP	7.53	□□□□□ -1.2
GCN3	YKR026C	TAH18	Q12181	623 aa		7.53	□□□□□ -1.2
GCN3	YKR026C	HAT1	Q12341	374 aa		7.53	□□□□□ -1.2
GCN3	YKR026C	TRS33	Q99394	268 aa		7.53	□□□□□ -1.2
GCN3	YKR026C	POM152	P39685	1337 aa		7.52	□□□□□ -1.2
GCN3	YKR026C	AI2	P03876	854 aa		7.52	□□□□□ -1.21
GCN3	YKR026C	MPH3	P0CE00	602 aa		7.52	□□□□□ -1.21
GCN3	YKR026C	MBR1	P23493	339 aa		7.52	□□□□□ -1.21
GCN3	YKR026C	IMP2'	P32351	346 aa		7.52	□□□□□ -1.21
GCN3	YKR026C	NPL4	P33755	580 aa		7.52	□□□□□ -1.21
GCN3	YKR026C	YKT6	P36015	200 aa	Known RBP	7.52	□□□□□ -1.21
GCN3	YKR026C	GEF1	P37020	779 aa		7.52	□□□□□ -1.21
GCN3	YKR026C	RFT1	P38206	574 aa	Predicted RBP	7.52	□□□□□ -1.21
GCN3	YKR026C	TCD1	P38756	429 aa		7.52	□□□□□ -1.21
GCN3	YKR026C	RPN1	P38764	993 aa	Known RBP	7.52	□□□□□ -1.21
GCN3	YKR026C	CRG1	P38892	291 aa	RIP-Chip data	7.52	□□□□□ -1.21	not detected
GCN3	YKR026C	GTT3	P39996	337 aa		7.52	□□□□□ -1.21
GCN3	YKR026C	UBP16	Q02863	499 aa		7.52	□□□□□ -1.21
GCN3	YKR026C	SPC110	P32380	944 aa		7.51	□□□□□ -1.21
GCN3	YKR026C	YER130C	P39959	443 aa		7.51	□□□□□ -1.21
GCN3	YKR026C	YPT11	P48559	417 aa		7.51	□□□□□ -1.21
GCN3	YKR026C	TIM50	Q02776	476 aa		7.51	□□□□□ -1.21
GCN3	YKR026C	YLR407W	Q06070	228 aa		7.51	□□□□□ -1.21
GCN3	YKR026C	SPN1	Q06505	410 aa	Predicted RBP	7.51	□□□□□ -1.21
GCN3	YKR026C	MSB4	Q12317	492 aa		7.51	□□□□□ -1.21
GCN3	YKR026C	PGA3	Q12746	312 aa	Known RBP	7.51	□□□□□ -1.21
GCN3	YKR026C	RIM15	P43565	1770 aa		7.51	□□□□□ -1.21
GCN3	YKR026C	RPL22A	P05749	121 aa	Known RBP	7.5	□□□□□ -1.21
GCN3	YKR026C	GPA1	P08539	472 aa		7.5	□□□□□ -1.21
GCN3	YKR026C	SSA2	P10592	639 aa	Known RBP	7.5	□□□□□ -1.21
GCN3	YKR026C	RRP8	P38961	392 aa	Known RBP	7.5	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 148 ms