RNA–Protein interactions for RNA: YKL195W

MIA40, Transcript of Mitochondrial oxidoreductase, yeast

Gene MIA40, Length 1,212 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MIA40	YKL195W	CLA4	P48562	842 aa		7.99	□□□□□ -1.13
MIA40	YKL195W	SRT1	Q03175	343 aa		7.99	□□□□□ -1.13
MIA40	YKL195W	NSE3	Q05541	303 aa		7.99	□□□□□ -1.13
MIA40	YKL195W	BMS1	Q08965	1183 aa	Known RBP	7.99	□□□□□ -1.13
MIA40	YKL195W	AIR1	P40507	360 aa	Known RBP	7.98	□□□□□ -1.13
MIA40	YKL195W	BDP1	P46678	594 aa		7.98	□□□□□ -1.13
MIA40	YKL195W	AGE1	Q04412	482 aa		7.98	□□□□□ -1.13
MIA40	YKL195W	TY4B-H	P0C2J7	1802 aa		7.97	□□□□□ -1.13
MIA40	YKL195W	TY4B-J	P47024	1803 aa		7.97	□□□□□ -1.13
MIA40	YKL195W	UGA3	P26370	528 aa		7.97	□□□□□ -1.13
MIA40	YKL195W	FRK1	Q03002	865 aa	Predicted RBP	7.97	□□□□□ -1.13
MIA40	YKL195W	NOP8	Q08287	484 aa	Predicted RBP	7.97	□□□□□ -1.13
MIA40	YKL195W	AIM7	Q12156	149 aa		7.97	□□□□□ -1.13
MIA40	YKL195W	EDE1	P34216	1381 aa		7.97	□□□□□ -1.13
MIA40	YKL195W	YRF1-2	P40105	1681 aa		7.96	□□□□□ -1.13
MIA40	YKL195W	COQ4	O13525	335 aa		7.96	□□□□□ -1.14
MIA40	YKL195W	SIT4	P20604	311 aa		7.96	□□□□□ -1.14
MIA40	YKL195W	KCC4	P25389	1037 aa		7.96	□□□□□ -1.14
MIA40	YKL195W	PAC1	P39946	494 aa	Known RBP	7.96	□□□□□ -1.14
MIA40	YKL195W	YPP1	P46951	817 aa		7.96	□□□□□ -1.14
MIA40	YKL195W	NIS1	P53939	407 aa		7.96	□□□□□ -1.14
MIA40	YKL195W	APC1	P53886	1748 aa		7.95	□□□□□ -1.14
MIA40	YKL195W	ENT1	Q12518	454 aa		7.95	□□□□□ -1.14
MIA40	YKL195W	KIN1	P13185	1064 aa		7.94	□□□□□ -1.14
MIA40	YKL195W	YNG2	P38806	282 aa	Known RBP	7.94	□□□□□ -1.14
MIA40	YKL195W	YNL115C	P53925	644 aa		7.94	□□□□□ -1.14
MIA40	YKL195W	CSI1	Q04368	295 aa		7.94	□□□□□ -1.14
MIA40	YKL195W	TUB4	P53378	473 aa		7.93	□□□□□ -1.14
MIA40	YKL195W	MEC3	Q02574	474 aa		7.93	□□□□□ -1.14
MIA40	YKL195W	RRP5	Q05022	1729 aa	Known RBP	7.92	□□□□□ -1.14
MIA40	YKL195W	MOD5	P07884	428 aa		7.92	□□□□□ -1.14
MIA40	YKL195W	ECM16	Q04217	1267 aa	Known RBP	7.92	□□□□□ -1.14
MIA40	YKL195W	INP54	Q08227	384 aa	Known RBP	7.92	□□□□□ -1.14
MIA40	YKL195W	CDC4	P07834	779 aa		7.91	□□□□□ -1.14
MIA40	YKL195W	RAD4	P14736	754 aa		7.91	□□□□□ -1.14
MIA40	YKL195W	YOL057W	Q08225	711 aa		7.91	□□□□□ -1.14
MIA40	YKL195W	NUP145	P49687	1317 aa		7.91	□□□□□ -1.14
MIA40	YKL195W	RSF2	P46974	1380 aa		7.91	□□□□□ -1.14
MIA40	YKL195W	BRE2	P43132	505 aa		7.9	□□□□□ -1.14
MIA40	YKL195W	SPO1	P53541	631 aa		7.9	□□□□□ -1.14
MIA40	YKL195W	FPK1	P53739	893 aa		7.9	□□□□□ -1.14
MIA40	YKL195W	ENV9	Q08651	330 aa		7.9	□□□□□ -1.14
MIA40	YKL195W	RPS19A	P07280	144 aa	Known RBP	7.89	□□□□□ -1.15
MIA40	YKL195W	RPS19B	P07281	144 aa	Predicted RBP	7.89	□□□□□ -1.15
MIA40	YKL195W	MRP7	P12687	371 aa		7.89	□□□□□ -1.15
MIA40	YKL195W	NMD2	P38798	1089 aa	Known RBP	7.89	□□□□□ -1.15
MIA40	YKL195W	YIR014W	P40570	242 aa		7.89	□□□□□ -1.15
MIA40	YKL195W	HED1	Q03937	162 aa		7.89	□□□□□ -1.15
MIA40	YKL195W	ATG13	Q06628	738 aa		7.89	□□□□□ -1.15
MIA40	YKL195W	ALE1	Q08548	619 aa		7.89	□□□□□ -1.15
MIA40	YKL195W	FKS3	Q04952	1785 aa		7.89	□□□□□ -1.15
MIA40	YKL195W	OSM1	P21375	501 aa	Known RBP	7.88	□□□□□ -1.15
MIA40	YKL195W	SCJ1	P25303	377 aa		7.88	□□□□□ -1.15
MIA40	YKL195W	RAD24	P32641	659 aa		7.88	□□□□□ -1.15
MIA40	YKL195W	YKL133C	P36066	463 aa		7.88	□□□□□ -1.15
MIA40	YKL195W	EAF7	P53911	425 aa	Known RBP	7.88	□□□□□ -1.15
MIA40	YKL195W	URB1	P34241	1764 aa	Known RBP	7.88	□□□□□ -1.15
MIA40	YKL195W	YIL177C	P40434	1758 aa		7.88	□□□□□ -1.15
MIA40	YKL195W	YJL225C	P40889	1758 aa		7.88	□□□□□ -1.15
MIA40	YKL195W	OPY1	P38271	328 aa		7.87	□□□□□ -1.15
MIA40	YKL195W	RFC1	P38630	861 aa	Known RBP	7.87	□□□□□ -1.15
MIA40	YKL195W	YGR122W	P53272	402 aa		7.87	□□□□□ -1.15
MIA40	YKL195W	APP1	P53933	587 aa		7.87	□□□□□ -1.15
MIA40	YKL195W	ADE16	P54113	591 aa	Known RBP	7.87	□□□□□ -1.15
MIA40	YKL195W	LYS2	P07702	1392 aa		7.86	□□□□□ -1.15
MIA40	YKL195W	IME2	P32581	645 aa		7.86	□□□□□ -1.15
MIA40	YKL195W	YBP2	P53169	641 aa		7.86	□□□□□ -1.15
MIA40	YKL195W	NKP2	Q06162	153 aa		7.86	□□□□□ -1.15
MIA40	YKL195W	TYW1	Q08960	810 aa	Known RBP	7.86	□□□□□ -1.15
MIA40	YKL195W	LEO1	P38439	464 aa		7.85	□□□□□ -1.15
MIA40	YKL195W	RGA1	P39083	1007 aa		7.85	□□□□□ -1.15
MIA40	YKL195W	ZDS2	P54786	942 aa		7.85	□□□□□ -1.15
MIA40	YKL195W	DNM1	P54861	757 aa		7.85	□□□□□ -1.15
MIA40	YKL195W	RMT2	Q03305	412 aa		7.85	□□□□□ -1.15
MIA40	YKL195W	SWC3	P31376	625 aa		7.84	□□□□□ -1.15
MIA40	YKL195W	NUP133	P36161	1157 aa		7.84	□□□□□ -1.15
MIA40	YKL195W	YDR306C	Q06640	478 aa		7.84	□□□□□ -1.15
MIA40	YKL195W	KTR1	P27810	393 aa	Known RBP	7.83	□□□□□ -1.16
MIA40	YKL195W	BOI2	P39969	1040 aa		7.83	□□□□□ -1.16
MIA40	YKL195W	HGH1	P48362	394 aa	Known RBP	7.83	□□□□□ -1.16
MIA40	YKL195W	HST2	P53686	357 aa		7.83	□□□□□ -1.16
MIA40	YKL195W	GCR2	Q01722	534 aa		7.83	□□□□□ -1.16
MIA40	YKL195W	VPS64	Q03944	604 aa		7.83	□□□□□ -1.16
MIA40	YKL195W	IMH1	Q06704	911 aa	Known RBP	7.83	□□□□□ -1.16
MIA40	YKL195W	RAD50	P12753	1312 aa		7.82	□□□□□ -1.16
MIA40	YKL195W	SLY41	P22215	453 aa		7.81	□□□□□ -1.16
MIA40	YKL195W	ESS1	P22696	170 aa		7.81	□□□□□ -1.16
MIA40	YKL195W	GCD7	P32502	381 aa	Predicted RBP	7.81	□□□□□ -1.16
MIA40	YKL195W	MMP1	Q12372	583 aa		7.81	□□□□□ -1.16
MIA40	YKL195W	PCT1	P13259	424 aa		7.8	□□□□□ -1.16
MIA40	YKL195W	GUA1	P38625	525 aa	Known RBP	7.8	□□□□□ -1.16
MIA40	YKL195W	CSN12	P47130	423 aa		7.8	□□□□□ -1.16
MIA40	YKL195W	PUS5	Q06244	254 aa		7.8	□□□□□ -1.16
MIA40	YKL195W	SSP2	Q08646	371 aa		7.8	□□□□□ -1.16
MIA40	YKL195W	NCB2	Q92317	146 aa		7.8	□□□□□ -1.16
MIA40	YKL195W	COB	P00163	385 aa		7.79	□□□□□ -1.16
MIA40	YKL195W	GLN1	P32288	370 aa	Known RBP	7.79	□□□□□ -1.16
MIA40	YKL195W	KXD1	P53158	218 aa		7.79	□□□□□ -1.16
MIA40	YKL195W	MET32	Q12041	191 aa		7.79	□□□□□ -1.16
MIA40	YKL195W	RLF2	Q12495	606 aa		7.79	□□□□□ -1.16

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms