RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W PAM1P37304 830 aaKnown RBP8.34□□□□□ -1.07
MDH1YKL085W THI22Q06490 572 aa8.34□□□□□ -1.07
MDH1YKL085W OXP1P28273 1286 aa8.33□□□□□ -1.08
MDH1YKL085W MGM1P32266 881 aa8.33□□□□□ -1.08
MDH1YKL085W PSD2P53037 1138 aaKnown RBP8.33□□□□□ -1.08
MDH1YKL085W MTC3P53077 123 aa8.33□□□□□ -1.08
MDH1YKL085W PRP42Q03776 544 aaKnown RBP8.33□□□□□ -1.08
MDH1YKL085W TOS4Q06266 489 aa8.33□□□□□ -1.08
MDH1YKL085W YDR306CQ06640 478 aa8.33□□□□□ -1.08
MDH1YKL085W SAC3P46674 1301 aa8.32□□□□□ -1.08
MDH1YKL085W SET1P38827 1080 aaKnown RBP8.32□□□□□ -1.08
MDH1YKL085W IOC4Q04213 475 aa8.32□□□□□ -1.08
MDH1YKL085W THI3Q07471 609 aa8.32□□□□□ -1.08
MDH1YKL085W RTT109Q07794 436 aa8.32□□□□□ -1.08
MDH1YKL085W LCB1P25045 558 aaKnown RBP8.31□□□□□ -1.08
MDH1YKL085W CST6P40535 587 aa8.31□□□□□ -1.08
MDH1YKL085W GYP7P48365 746 aa8.31□□□□□ -1.08
MDH1YKL085W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
MDH1YKL085W NGR1P32831 672 aaKnown RBP8.3□□□□□ -1.08
MDH1YKL085W RSC30P38781 883 aa8.3□□□□□ -1.08
MDH1YKL085W VNX1P42839 908 aa8.3□□□□□ -1.08
MDH1YKL085W ITC1P53125 1264 aa8.3□□□□□ -1.08
MDH1YKL085W SEN54Q02825 467 aaPredicted RBP8.3□□□□□ -1.08
MDH1YKL085W RBA50Q04418 439 aa8.3□□□□□ -1.08
MDH1YKL085W ARG82P07250 355 aa8.29□□□□□ -1.08
MDH1YKL085W RPS7AP26786 190 aaKnown RBP8.29□□□□□ -1.08
MDH1YKL085W YJL171CP46992 396 aa8.29□□□□□ -1.08
MDH1YKL085W IRC4Q03036 179 aa8.29□□□□□ -1.08
MDH1YKL085W NUP133P36161 1157 aa8.28□□□□□ -1.08
MDH1YKL085W HEF3P53978 1044 aaKnown RBP8.28□□□□□ -1.08
MDH1YKL085W SRT1Q03175 343 aa8.27□□□□□ -1.09
MDH1YKL085W YPR117WQ06116 2489 aa8.27□□□□□ -1.09
MDH1YKL085W MRP7P12687 371 aa8.26□□□□□ -1.09
MDH1YKL085W MAL31P38156 614 aa8.26□□□□□ -1.09
MDH1YKL085W NIT1P40447 199 aa8.26□□□□□ -1.09
MDH1YKL085W MPP10P47083 593 aaKnown RBP8.26□□□□□ -1.09
MDH1YKL085W WRS1Q12109 432 aaKnown RBP8.26□□□□□ -1.09
MDH1YKL085W PSH1Q12161 406 aa8.26□□□□□ -1.09
MDH1YKL085W TAO3P40468 2376 aa8.25□□□□□ -1.09
MDH1YKL085W ASH1P34233 588 aa8.25□□□□□ -1.09
MDH1YKL085W ACK1Q07622 623 aaPredicted RBP8.25□□□□□ -1.09
MDH1YKL085W HXT10P43581 546 aa8.24□□□□□ -1.09
MDH1YKL085W MTC5Q03897 1148 aa8.24□□□□□ -1.09
MDH1YKL085W AIR2Q12476 344 aaKnown RBP8.24□□□□□ -1.09
MDH1YKL085W GAL2P13181 574 aa8.23□□□□□ -1.09
MDH1YKL085W YGR122WP53272 402 aa8.23□□□□□ -1.09
MDH1YKL085W JIP4Q03361 876 aa8.22□□□□□ -1.09
MDH1YKL085W SRC1Q03707 834 aa8.22□□□□□ -1.09
MDH1YKL085W YLR225CQ05948 407 aaKnown RBP8.22□□□□□ -1.09
MDH1YKL085W SGD1Q06132 899 aa8.22□□□□□ -1.09
MDH1YKL085W TPD3P31383 635 aa8.21□□□□□ -1.1
MDH1YKL085W SPP1Q03012 353 aa8.21□□□□□ -1.1
MDH1YKL085W PPM2Q08282 695 aa8.21□□□□□ -1.1
MDH1YKL085W YOR238WQ08634 303 aa8.21□□□□□ -1.1
MDH1YKL085W PFK2P16862 959 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
MDH1YKL085W KEL1P38853 1164 aaKnown RBP8.2□□□□□ -1.1
MDH1YKL085W JJJ2P46997 583 aa8.2□□□□□ -1.1
MDH1YKL085W PEX29Q03370 554 aa8.2□□□□□ -1.1
MDH1YKL085W ADR1P07248 1323 aa8.2□□□□□ -1.1
MDH1YKL085W SWC3P31376 625 aa8.19□□□□□ -1.1
MDH1YKL085W UBP12P39538 1254 aa8.19□□□□□ -1.1
MDH1YKL085W NUG1P40010 520 aaKnown RBP8.19□□□□□ -1.1
MDH1YKL085W SPR3P41901 512 aa8.19□□□□□ -1.1
MDH1YKL085W PSF3Q12146 194 aa8.19□□□□□ -1.1
MDH1YKL085W RPT3P33298 428 aaKnown RBP8.18□□□□□ -1.1
MDH1YKL085W GIN4Q12263 1142 aa8.18□□□□□ -1.1
MDH1YKL085W RAD53P22216 821 aa8.17□□□□□ -1.1
MDH1YKL085W YFH7P43591 353 aa8.17□□□□□ -1.1
MDH1YKL085W PUS6P53294 404 aa8.17□□□□□ -1.1
MDH1YKL085W YDL144CQ07589 356 aa8.17□□□□□ -1.1
MDH1YKL085W FLO1P32768 1537 aa8.17□□□□□ -1.1
MDH1YKL085W SUP35P05453 685 aaKnown RBP8.16□□□□□ -1.1
MDH1YKL085W RAD24P32641 659 aa8.16□□□□□ -1.1
MDH1YKL085W ULP1Q02724 621 aa8.16□□□□□ -1.1
MDH1YKL085W PAH1P32567 862 aa8.15□□□□□ -1.1
MDH1YKL085W SNU66Q12420 587 aaPredicted RBP8.15□□□□□ -1.1
MDH1YKL085W SNF3P10870 884 aa8.14□□□□□ -1.11
MDH1YKL085W IXR1P33417 597 aa8.14□□□□□ -1.11
MDH1YKL085W TPS3P38426 1054 aaKnown RBP8.14□□□□□ -1.11
MDH1YKL085W GLO3P38682 493 aaKnown RBP8.14□□□□□ -1.11
MDH1YKL085W FBP1P09201 348 aa8.13□□□□□ -1.11
MDH1YKL085W ERG7P38604 731 aa8.13□□□□□ -1.11
MDH1YKL085W MGA2P40578 1113 aa8.13□□□□□ -1.11
MDH1YKL085W DMA2P53924 522 aa8.13□□□□□ -1.11
MDH1YKL085W YVH1Q02256 364 aaKnown RBP8.13□□□□□ -1.11
MDH1YKL085W BOI2P39969 1040 aa8.12□□□□□ -1.11
MDH1YKL085W PSF2P40359 213 aa8.12□□□□□ -1.11
MDH1YKL085W APL6P46682 809 aa8.12□□□□□ -1.11
MDH1YKL085W NET1P47035 1189 aa8.12□□□□□ -1.11
MDH1YKL085W NSG2P53898 299 aa8.12□□□□□ -1.11
MDH1YKL085W ADP1P25371 1049 aa8.11□□□□□ -1.11
MDH1YKL085W CLA4P48562 842 aa8.11□□□□□ -1.11
MDH1YKL085W PMA1P05030 918 aaKnown RBP8.1□□□□□ -1.11
MDH1YKL085W YDJ1P25491 409 aaKnown RBP8.1□□□□□ -1.11
MDH1YKL085W YIR042CP40586 236 aa8.1□□□□□ -1.11
MDH1YKL085W SEC18P18759 758 aaKnown RBP8.09□□□□□ -1.11
MDH1YKL085W PTK1P36002 662 aaPredicted RBP8.09□□□□□ -1.11
MDH1YKL085W HAL5P38970 855 aaKnown RBP8.09□□□□□ -1.11
MDH1YKL085W SLA1P32790 1244 aa8.08□□□□□ -1.12
MDH1YKL085W OCT1P35999 772 aa8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms