RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C AUS1Q08409 1394 aa4.44□□□□□ -1.7
SPT23YKL020C PEX5P35056 612 aa4.43□□□□□ -1.7
SPT23YKL020C RPC37P36121 282 aa4.43□□□□□ -1.7
SPT23YKL020C VHR2P40041 505 aa4.43□□□□□ -1.7
SPT23YKL020C SDS3P40505 327 aa4.43□□□□□ -1.7
SPT23YKL020C KRE33P53914 1056 aaKnown RBP4.43□□□□□ -1.7
SPT23YKL020C YNL058CP53947 316 aa4.43□□□□□ -1.7
SPT23YKL020C MRD1Q06106 887 aaKnown RBP4.43□□□□□ -1.7
SPT23YKL020C NUP145P49687 1317 aa4.43□□□□□ -1.7
SPT23YKL020C MPH3P0CE00 602 aa4.43□□□□□ -1.7
SPT23YKL020C PHO84P25297 587 aaKnown RBP4.43□□□□□ -1.7
SPT23YKL020C ARC19P33204 171 aaKnown RBP4.43□□□□□ -1.7
SPT23YKL020C VPS41P38959 992 aa4.43□□□□□ -1.7
SPT23YKL020C MEP1P40260 492 aa4.43□□□□□ -1.7
SPT23YKL020C RPL17BP46990 184 aaKnown RBP4.43□□□□□ -1.7
SPT23YKL020C AVO1Q08236 1176 aa4.43□□□□□ -1.7
SPT23YKL020C BRR1Q99177 341 aaPredicted RBP4.43□□□□□ -1.7
SPT23YKL020C TRS33Q99394 268 aa4.43□□□□□ -1.7
SPT23YKL020C TOM20P35180 183 aa4.42□□□□□ -1.7
SPT23YKL020C NDC80P40460 691 aa4.42□□□□□ -1.7
SPT23YKL020C FAF1P40546 346 aaPredicted RBP4.42□□□□□ -1.7
SPT23YKL020C MPH1P40562 993 aa4.42□□□□□ -1.7
SPT23YKL020C SLX4Q12098 748 aa4.42□□□□□ -1.7
SPT23YKL020C TIF3P34167 436 aaKnown RBP4.42□□□□□ -1.7
SPT23YKL020C RIO2P40160 425 aaKnown RBP4.42□□□□□ -1.7
SPT23YKL020C ADE12P80210 433 aaKnown RBP4.42□□□□□ -1.7
SPT23YKL020C TMA64Q04600 565 aaKnown RBP4.42□□□□□ -1.7
SPT23YKL020C PEX19Q07418 342 aa4.42□□□□□ -1.7
SPT23YKL020C RKM4Q12504 494 aa4.42□□□□□ -1.7
SPT23YKL020C PWP2P25635 923 aaKnown RBP4.42□□□□□ -1.7
SPT23YKL020C COY1P34237 679 aa4.42□□□□□ -1.7
SPT23YKL020C OLA1P38219 394 aaKnown RBP4.42□□□□□ -1.7
SPT23YKL020C BOI2P39969 1040 aa4.42□□□□□ -1.7
SPT23YKL020C RRT14P40470 206 aa4.42□□□□□ -1.7
SPT23YKL020C CIR1P42940 261 aa4.42□□□□□ -1.7
SPT23YKL020C BTN2P53286 410 aa4.42□□□□□ -1.7
SPT23YKL020C NKP1Q12493 238 aa4.42□□□□□ -1.7
SPT23YKL020C UGA3P26370 528 aa4.41□□□□□ -1.7
SPT23YKL020C HIR2P32480 875 aa4.41□□□□□ -1.7
SPT23YKL020C YLF2P38746 405 aa4.41□□□□□ -1.7
SPT23YKL020C PET100P38958 111 aa4.41□□□□□ -1.7
SPT23YKL020C DNM1P54861 757 aa4.41□□□□□ -1.7
SPT23YKL020C SRP1Q02821 542 aaKnown RBP4.41□□□□□ -1.7
SPT23YKL020C SNU66Q12420 587 aaPredicted RBP4.41□□□□□ -1.7
SPT23YKL020C CYB2P00175 591 aa4.41□□□□□ -1.7
SPT23YKL020C SRS2P12954 1174 aa4.41□□□□□ -1.7
SPT23YKL020C MIC60P36112 540 aa4.41□□□□□ -1.7
SPT23YKL020C MAL31P38156 614 aa4.41□□□□□ -1.7
SPT23YKL020C MAM1P40065 302 aa4.41□□□□□ -1.7
SPT23YKL020C GPI8P49018 411 aa4.41□□□□□ -1.7
SPT23YKL020C SHE4P51534 789 aa4.41□□□□□ -1.7
SPT23YKL020C ENT2Q05785 613 aa4.41□□□□□ -1.7
SPT23YKL020C ARR2Q06597 130 aa4.41□□□□□ -1.7
SPT23YKL020C TCB1Q12466 1186 aa4.41□□□□□ -1.7
SPT23YKL020C FAR1P21268 830 aa4.4□□□□□ -1.7
SPT23YKL020C VMA4P22203 233 aaKnown RBP4.4□□□□□ -1.7
SPT23YKL020C DPH5P32469 300 aaPredicted RBP4.4□□□□□ -1.7
SPT23YKL020C RPN12P32496 274 aa4.4□□□□□ -1.7
SPT23YKL020C YHR218WP38899 603 aa4.4□□□□□ -1.7
SPT23YKL020C PNG1Q02890 363 aa4.4□□□□□ -1.7
SPT23YKL020C PHM6Q05637 104 aa4.4□□□□□ -1.7
SPT23YKL020C SSK22P25390 1331 aaPredicted RBP4.4□□□□□ -1.7
SPT23YKL020C CYC8P14922 966 aa4.4□□□□□ -1.71
SPT23YKL020C NUF2P33895 451 aa4.4□□□□□ -1.71
SPT23YKL020C MET1P36150 593 aa4.4□□□□□ -1.71
SPT23YKL020C BDH2P39713 417 aa4.4□□□□□ -1.71
SPT23YKL020C MDM1Q01846 1127 aa4.4□□□□□ -1.71
SPT23YKL020C RSM28Q03430 361 aa4.4□□□□□ -1.71
SPT23YKL020C YDL144CQ07589 356 aa4.4□□□□□ -1.71
SPT23YKL020C WHI5Q12416 295 aa4.4□□□□□ -1.71
SPT23YKL020C RAD50P12753 1312 aa4.4□□□□□ -1.71
SPT23YKL020C NPL4P33755 580 aa4.4□□□□□ -1.71
SPT23YKL020C SEC26P41810 973 aaKnown RBP4.4□□□□□ -1.71
SPT23YKL020C TFB4Q12004 338 aa4.4□□□□□ -1.71
SPT23YKL020C PDI1P17967 522 aaKnown RBP4.39□□□□□ -1.71
SPT23YKL020C RME1P32338 300 aaKnown RBP4.39□□□□□ -1.71
SPT23YKL020C NFU1P32860 256 aa4.39□□□□□ -1.71
SPT23YKL020C RVS167P39743 482 aaKnown RBP4.39□□□□□ -1.71
SPT23YKL020C YIR042CP40586 236 aa4.39□□□□□ -1.71
SPT23YKL020C SUM1P46676 1062 aa4.39□□□□□ -1.71
SPT23YKL020C YRM1Q12340 786 aa4.39□□□□□ -1.71
SPT23YKL020C SEC14P24280 304 aaKnown RBP4.39□□□□□ -1.71
SPT23YKL020C PUF4P25339 888 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
SPT23YKL020C RPG1P38249 964 aaKnown RBP4.39□□□□□ -1.71
SPT23YKL020C GDT1P38301 280 aaPredicted RBP4.39□□□□□ -1.71
SPT23YKL020C ERC1P38767 581 aa4.39□□□□□ -1.71
SPT23YKL020C ESF2P53743 316 aaKnown RBP4.39□□□□□ -1.71
SPT23YKL020C TIM11P81449 96 aaPredicted RBP4.39□□□□□ -1.71
SPT23YKL020C PMT7Q06644 662 aa4.39□□□□□ -1.71
SPT23YKL020C RTC1Q08281 1341 aa4.39□□□□□ -1.71
SPT23YKL020C PDR12Q02785 1511 aa4.39□□□□□ -1.71
SPT23YKL020C MDS3P53094 1487 aa4.38□□□□□ -1.71
SPT23YKL020C ATG14P38270 344 aa4.38□□□□□ -1.71
SPT23YKL020C SHC1P39000 512 aa4.38□□□□□ -1.71
SPT23YKL020C MSN5P52918 1224 aa4.38□□□□□ -1.71
SPT23YKL020C ITT1Q04638 464 aa4.38□□□□□ -1.71
SPT23YKL020C COG4Q06096 861 aa4.38□□□□□ -1.71
SPT23YKL020C TLG2Q08144 397 aa4.38□□□□□ -1.71
SPT23YKL020C SIT4P20604 311 aa4.38□□□□□ -1.71
SPT23YKL020C MRC1P25588 1096 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms