RNA–Protein interactions for RNA: YJR045C

SSC1, Transcript of Hsp70 family ATPase, yeastyeast

Gene SSC1, Length 1,965 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSC1YJR045C AIM7Q12156 149 aa8.42□□□□□ -1.06
SSC1YJR045C PCT1P13259 424 aa8.42□□□□□ -1.06
SSC1YJR045C SWC3P31376 625 aa8.42□□□□□ -1.06
SSC1YJR045C SPC110P32380 944 aa8.42□□□□□ -1.06
SSC1YJR045C VPS27P40343 622 aaKnown RBP8.42□□□□□ -1.06
SSC1YJR045C UBX2Q04228 584 aa8.42□□□□□ -1.06
SSC1YJR045C GAS5Q08193 484 aa8.42□□□□□ -1.06
SSC1YJR045C NOP8Q08287 484 aaPredicted RBP8.42□□□□□ -1.06
SSC1YJR045C NGR1P32831 672 aaKnown RBP8.41□□□□□ -1.06
SSC1YJR045C NOT3P06102 836 aaKnown RBP8.41□□□□□ -1.06
SSC1YJR045C MGM1P32266 881 aa8.41□□□□□ -1.06
SSC1YJR045C SPL2P38839 148 aa8.41□□□□□ -1.06
SSC1YJR045C THI3Q07471 609 aa8.41□□□□□ -1.06
SSC1YJR045C AFG2P32794 780 aa8.4□□□□□ -1.06
SSC1YJR045C SMC3P47037 1230 aa8.4□□□□□ -1.06
SSC1YJR045C VPS4P52917 437 aa8.4□□□□□ -1.06
SSC1YJR045C RRG1Q12167 365 aaPredicted RBP8.4□□□□□ -1.06
SSC1YJR045C STV1P37296 890 aa8.39□□□□□ -1.07
SSC1YJR045C SPT2P06843 333 aaPredicted RBP8.39□□□□□ -1.07
SSC1YJR045C UBP12P39538 1254 aa8.39□□□□□ -1.07
SSC1YJR045C GSM1P42950 618 aa8.39□□□□□ -1.07
SSC1YJR045C MTC5Q03897 1148 aa8.39□□□□□ -1.07
SSC1YJR045C CDC45Q08032 650 aa8.39□□□□□ -1.07
SSC1YJR045C FLO11P08640 1367 aa8.38□□□□□ -1.07
SSC1YJR045C EMP47P43555 445 aa8.38□□□□□ -1.07
SSC1YJR045C HXT10P43581 546 aa8.38□□□□□ -1.07
SSC1YJR045C YRB30P53107 440 aaPredicted RBP8.38□□□□□ -1.07
SSC1YJR045C CSI1Q04368 295 aa8.38□□□□□ -1.07
SSC1YJR045C MSP1P28737 362 aa8.37□□□□□ -1.07
SSC1YJR045C SWE1P32944 819 aa8.37□□□□□ -1.07
SSC1YJR045C BOI2P39969 1040 aa8.37□□□□□ -1.07
SSC1YJR045C YGR117CP53270 476 aa8.37□□□□□ -1.07
SSC1YJR045C DMA2P53924 522 aa8.37□□□□□ -1.07
SSC1YJR045C CRF1Q04930 467 aa8.37□□□□□ -1.07
SSC1YJR045C MAK21Q12176 1025 aaKnown RBP8.37□□□□□ -1.07
SSC1YJR045C HPR1P17629 752 aaKnown RBP8.37□□□□□ -1.07
SSC1YJR045C KNS1P32350 737 aaPredicted RBP8.37□□□□□ -1.07
SSC1YJR045C YIL089WP40500 205 aa8.37□□□□□ -1.07
SSC1YJR045C VPS24P36095 224 aaKnown RBP8.36□□□□□ -1.07
SSC1YJR045C NMD2P38798 1089 aaKnown RBP8.36□□□□□ -1.07
SSC1YJR045C SRC1Q03707 834 aa8.36□□□□□ -1.07
SSC1YJR045C SUP35P05453 685 aaKnown RBP8.35□□□□□ -1.07
SSC1YJR045C MRPL32P25348 183 aa8.35□□□□□ -1.07
SSC1YJR045C ARL1P38116 183 aaKnown RBP8.35□□□□□ -1.07
SSC1YJR045C ETP1P38748 585 aaKnown RBP8.35□□□□□ -1.07
SSC1YJR045C PEA2P40091 420 aa8.35□□□□□ -1.07
SSC1YJR045C IRC4Q03036 179 aa8.35□□□□□ -1.07
SSC1YJR045C TOS4Q06266 489 aa8.35□□□□□ -1.07
SSC1YJR045C SNU66Q12420 587 aaPredicted RBP8.35□□□□□ -1.07
SSC1YJR045C RVB2Q12464 471 aaKnown RBP8.35□□□□□ -1.07
SSC1YJR045C SEN54Q02825 467 aaPredicted RBP8.35□□□□□ -1.07
SSC1YJR045C PRP42Q03776 544 aaKnown RBP8.35□□□□□ -1.07
SSC1YJR045C LCB1P25045 558 aaKnown RBP8.33□□□□□ -1.08
SSC1YJR045C RPS19AP07280 144 aaKnown RBP8.33□□□□□ -1.08
SSC1YJR045C RPS19BP07281 144 aaPredicted RBP8.33□□□□□ -1.08
SSC1YJR045C CWC15Q03772 175 aaKnown RBP8.33□□□□□ -1.08
SSC1YJR045C ADR1P07248 1323 aa8.32□□□□□ -1.08
SSC1YJR045C DAL5P15365 543 aa8.32□□□□□ -1.08
SSC1YJR045C CLB5P30283 435 aa8.32□□□□□ -1.08
SSC1YJR045C DUS1P53759 423 aaKnown RBP8.32□□□□□ -1.08
SSC1YJR045C ARG82P07250 355 aa8.31□□□□□ -1.08
SSC1YJR045C RPS7AP26786 190 aaKnown RBP8.31□□□□□ -1.08
SSC1YJR045C YIL092WP40497 633 aa8.31□□□□□ -1.08
SSC1YJR045C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
SSC1YJR045C POM152P39685 1337 aa8.31□□□□□ -1.08
SSC1YJR045C SLA1P32790 1244 aa8.31□□□□□ -1.08
SSC1YJR045C CBP1P07252 654 aa8.3□□□□□ -1.08
SSC1YJR045C UTP7P40055 554 aaKnown RBP8.3□□□□□ -1.08
SSC1YJR045C JJJ2P46997 583 aa8.3□□□□□ -1.08
SSC1YJR045C TYW1Q08960 810 aaKnown RBP8.3□□□□□ -1.08
SSC1YJR045C WRS1Q12109 432 aaKnown RBP8.3□□□□□ -1.08
SSC1YJR045C GSC2P40989 1895 aa8.29□□□□□ -1.08
SSC1YJR045C PSF3Q12146 194 aa8.29□□□□□ -1.08
SSC1YJR045C RPT3P33298 428 aaKnown RBP8.28□□□□□ -1.08
SSC1YJR045C DSN1P40568 576 aa8.28□□□□□ -1.08
SSC1YJR045C ACK1Q07622 623 aaPredicted RBP8.28□□□□□ -1.08
SSC1YJR045C MTC3P53077 123 aa8.28□□□□□ -1.08
SSC1YJR045C TOM1Q03280 3268 aa8.27□□□□□ -1.09
SSC1YJR045C PNT1P38969 423 aa8.27□□□□□ -1.09
SSC1YJR045C GYP5Q12344 894 aa8.27□□□□□ -1.09
SSC1YJR045C SEC18P18759 758 aaKnown RBP8.26□□□□□ -1.09
SSC1YJR045C MSH3P25336 1018 aa8.26□□□□□ -1.09
SSC1YJR045C SIC1P38634 284 aa8.26□□□□□ -1.09
SSC1YJR045C YNG2P38806 282 aaKnown RBP8.26□□□□□ -1.09
SSC1YJR045C TPM2P40414 161 aa8.26□□□□□ -1.09
SSC1YJR045C YFH7P43591 353 aa8.26□□□□□ -1.09
SSC1YJR045C YNL011CP53980 444 aa8.26□□□□□ -1.09
SSC1YJR045C MSH4P40965 878 aaPredicted RBP8.26□□□□□ -1.09
SSC1YJR045C SPO1P53541 631 aa8.26□□□□□ -1.09
SSC1YJR045C DOS2P54858 310 aa8.26□□□□□ -1.09
SSC1YJR045C HSP82P02829 709 aaKnown RBP8.25□□□□□ -1.09
SSC1YJR045C CSR2Q12734 1121 aa8.25□□□□□ -1.09
SSC1YJR045C AI2P03876 854 aa8.24□□□□□ -1.09
SSC1YJR045C RAD2P07276 1031 aa8.24□□□□□ -1.09
SSC1YJR045C BSD2P38356 321 aa8.24□□□□□ -1.09
SSC1YJR045C GLO3P38682 493 aaKnown RBP8.24□□□□□ -1.09
SSC1YJR045C SSF1P38789 453 aaPredicted RBP8.24□□□□□ -1.09
SSC1YJR045C YIR042CP40586 236 aa8.24□□□□□ -1.09
SSC1YJR045C YJL171CP46992 396 aa8.24□□□□□ -1.09
SSC1YJR045C PUS6P53294 404 aa8.24□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms