RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C ECM2P38241 364 aaKnown RBP3.3□□□□□ -1.88
VPS35YJL154C RAD55P38953 406 aa3.3□□□□□ -1.88
VPS35YJL154C SAM37P50110 327 aa3.29□□□□□ -1.88
VPS35YJL154C OXR1Q08952 273 aa3.29□□□□□ -1.88
VPS35YJL154C RPP1AP05318 106 aaPredicted RBP3.29□□□□□ -1.88
VPS35YJL154C CIC1P38779 376 aaKnown RBP3.29□□□□□ -1.88
VPS35YJL154C YNL165WP53891 406 aa3.29□□□□□ -1.88
VPS35YJL154C APC11Q12157 165 aa3.29□□□□□ -1.88
VPS35YJL154C WHI5Q12416 295 aa3.29□□□□□ -1.88
VPS35YJL154C DAL1P32375 460 aa3.29□□□□□ -1.88
VPS35YJL154C VTC4P47075 721 aa3.29□□□□□ -1.88
VPS35YJL154C ISW1P38144 1129 aa3.28□□□□□ -1.88
VPS35YJL154C UBP15P50101 1230 aa3.28□□□□□ -1.88
VPS35YJL154C OYE2Q03558 400 aaKnown RBP3.28□□□□□ -1.88
VPS35YJL154C PDC6P26263 563 aaKnown RBP3.28□□□□□ -1.88
VPS35YJL154C GIP1P38229 639 aa3.28□□□□□ -1.88
VPS35YJL154C SCW11P53189 542 aa3.28□□□□□ -1.88
VPS35YJL154C YNL011CP53980 444 aa3.28□□□□□ -1.88
VPS35YJL154C NOC3Q07896 663 aaPredicted RBP3.28□□□□□ -1.88
VPS35YJL154C NAP1P25293 417 aaKnown RBP3.27□□□□□ -1.89
VPS35YJL154C BSC2Q05611 235 aa3.27□□□□□ -1.89
VPS35YJL154C MSN1P22148 382 aa3.27□□□□□ -1.89
VPS35YJL154C PEP7P32609 515 aa3.27□□□□□ -1.89
VPS35YJL154C RPT1P33299 467 aaKnown RBP3.27□□□□□ -1.89
VPS35YJL154C SHM1P37292 490 aaPredicted RBP3.27□□□□□ -1.89
VPS35YJL154C YHL008CP38750 627 aa3.27□□□□□ -1.89
VPS35YJL154C CDC55Q00362 526 aa3.27□□□□□ -1.89
VPS35YJL154C PSH1Q12161 406 aa3.27□□□□□ -1.89
VPS35YJL154C STB3Q12427 513 aa3.27□□□□□ -1.89
VPS35YJL154C MET4P32389 672 aa3.26□□□□□ -1.89
VPS35YJL154C IRS4P36115 615 aaKnown RBP3.26□□□□□ -1.89
VPS35YJL154C AIM46P38885 310 aa3.26□□□□□ -1.89
VPS35YJL154C ALD2P47771 506 aa3.26□□□□□ -1.89
VPS35YJL154C ATE1P16639 503 aa3.26□□□□□ -1.89
VPS35YJL154C SEC8P32855 1065 aa3.26□□□□□ -1.89
VPS35YJL154C NCL1P38205 684 aaKnown RBP3.26□□□□□ -1.89
VPS35YJL154C NTA1P40354 457 aa3.26□□□□□ -1.89
VPS35YJL154C OPT2Q06593 877 aa3.26□□□□□ -1.89
VPS35YJL154C YOR296WQ08748 1289 aa3.26□□□□□ -1.89
VPS35YJL154C BSD2P38356 321 aa3.25□□□□□ -1.89
VPS35YJL154C PSY2P40164 858 aa3.25□□□□□ -1.89
VPS35YJL154C SVF1Q05515 481 aa3.25□□□□□ -1.89
VPS35YJL154C TY1A-DR3Q12441 440 aa3.25□□□□□ -1.89
VPS35YJL154C RGP1P16664 663 aa3.25□□□□□ -1.89
VPS35YJL154C SLA1P32790 1244 aa3.25□□□□□ -1.89
VPS35YJL154C VPS35P34110 944 aa3.25□□□□□ -1.89
VPS35YJL154C CUS1Q02554 436 aaPredicted RBP3.25□□□□□ -1.89
VPS35YJL154C JIP5Q06214 492 aaPredicted RBP3.25□□□□□ -1.89
VPS35YJL154C LEU1P07264 779 aaKnown RBP3.25□□□□□ -1.89
VPS35YJL154C MET1P36150 593 aa3.25□□□□□ -1.89
VPS35YJL154C GLY1P37303 387 aaKnown RBP3.25□□□□□ -1.89
VPS35YJL154C MRPL16P38064 232 aa3.25□□□□□ -1.89
VPS35YJL154C YMR265CQ03508 461 aaKnown RBP3.25□□□□□ -1.89
VPS35YJL154C RPS31P05759 152 aaKnown RBP3.24□□□□□ -1.89
VPS35YJL154C PHO4P07270 312 aaKnown RBP3.24□□□□□ -1.89
VPS35YJL154C GBP2P25555 427 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
VPS35YJL154C TIF6Q12522 245 aaKnown RBP3.24□□□□□ -1.89
VPS35YJL154C SPA2P23201 1466 aaKnown RBP3.24□□□□□ -1.89
VPS35YJL154C RSC2Q06488 889 aa3.24□□□□□ -1.89
VPS35YJL154C CDC19P00549 500 aaKnown RBP3.23□□□□□ -1.89
VPS35YJL154C KAR2P16474 682 aaKnown RBP3.23□□□□□ -1.89
VPS35YJL154C PAM1P37304 830 aaKnown RBP3.23□□□□□ -1.89
VPS35YJL154C APM2P38700 605 aa3.23□□□□□ -1.89
VPS35YJL154C OSH7P38755 437 aa3.23□□□□□ -1.89
VPS35YJL154C MAD1P40957 749 aa3.23□□□□□ -1.89
VPS35YJL154C GPI13Q07830 1017 aa3.23□□□□□ -1.89
VPS35YJL154C INP54Q08227 384 aaKnown RBP3.23□□□□□ -1.89
VPS35YJL154C DAK2P43550 591 aa3.23□□□□□ -1.89
VPS35YJL154C RGD2P43556 714 aa3.23□□□□□ -1.89
VPS35YJL154C YJR107WP47145 328 aa3.23□□□□□ -1.89
VPS35YJL154C RSC4Q02206 625 aa3.23□□□□□ -1.89
VPS35YJL154C YDR444WQ04093 687 aa3.23□□□□□ -1.89
VPS35YJL154C RRP15Q06511 250 aaPredicted RBP3.23□□□□□ -1.89
VPS35YJL154C AIM44Q99299 758 aa3.23□□□□□ -1.89
VPS35YJL154C RPC31P17890 251 aa3.22□□□□□ -1.89
VPS35YJL154C PRE9P23638 258 aaKnown RBP3.22□□□□□ -1.89
VPS35YJL154C FPS1P23900 669 aa3.22□□□□□ -1.89
VPS35YJL154C MNL2Q12205 849 aa3.22□□□□□ -1.89
VPS35YJL154C MCM2P29469 868 aa3.22□□□□□ -1.89
VPS35YJL154C RPS26AP39938 119 aaKnown RBP3.22□□□□□ -1.89
VPS35YJL154C RPS26BP39939 119 aaKnown RBP3.22□□□□□ -1.89
VPS35YJL154C DAL4Q04895 635 aa3.22□□□□□ -1.89
VPS35YJL154C ESF1Q06344 628 aaKnown RBP3.22□□□□□ -1.89
VPS35YJL154C KTR2P33550 425 aa3.21□□□□□ -1.9
VPS35YJL154C YCS4Q06156 1176 aa3.21□□□□□ -1.9
VPS35YJL154C CLN2P20438 545 aa3.21□□□□□ -1.9
VPS35YJL154C FYV10P40492 516 aa3.21□□□□□ -1.9
VPS35YJL154C SKP1P52286 194 aa3.21□□□□□ -1.9
VPS35YJL154C PPT1P53043 513 aa3.21□□□□□ -1.9
VPS35YJL154C CWC24P53769 259 aa3.21□□□□□ -1.9
VPS35YJL154C KRE33P53914 1056 aaKnown RBP3.21□□□□□ -1.9
VPS35YJL154C HEH2Q03281 663 aa3.21□□□□□ -1.9
VPS35YJL154C RMD1Q03441 430 aa3.21□□□□□ -1.9
VPS35YJL154C LCB5Q06147 687 aaKnown RBP3.21□□□□□ -1.9
VPS35YJL154C TY1A-BLQ12266 440 aa3.21□□□□□ -1.9
VPS35YJL154C GAR1P28007 205 aaKnown RBP3.2□□□□□ -1.9
VPS35YJL154C SQT1P35184 431 aa3.2□□□□□ -1.9
VPS35YJL154C CEM1P39525 442 aa3.2□□□□□ -1.9
VPS35YJL154C YIL165CP40446 119 aa3.2□□□□□ -1.9
VPS35YJL154C YJL181WP46987 611 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms