RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W BBC1P47068 1157 aa13.16□□□□□ -0.3
SIM1YIL123W BDH2P39713 417 aa13.15□□□□□ -0.3
SIM1YIL123W CWH41P53008 833 aa13.15□□□□□ -0.3
SIM1YIL123W PKH3Q03306 898 aaPredicted RBP13.15□□□□□ -0.3
SIM1YIL123W SSA2P10592 639 aaKnown RBP13.14□□□□□ -0.31
SIM1YIL123W HAP5Q02516 242 aa13.14□□□□□ -0.31
SIM1YIL123W YBL086CP38177 466 aa13.13□□□□□ -0.31
SIM1YIL123W LAM4P38800 1345 aa13.13□□□□□ -0.31
SIM1YIL123W BIK1P11709 440 aa13.12□□□□□ -0.31
SIM1YIL123W SIT4P20604 311 aa13.12□□□□□ -0.31
SIM1YIL123W NPL4P33755 580 aa13.12□□□□□ -0.31
SIM1YIL123W YMR147WP40218 223 aaKnown RBP13.12□□□□□ -0.31
SIM1YIL123W HST1P53685 503 aa13.12□□□□□ -0.31
SIM1YIL123W HRQ1Q05549 1077 aa13.12□□□□□ -0.31
SIM1YIL123W IRC3Q06683 689 aa13.12□□□□□ -0.31
SIM1YIL123W RPL19AP0CX82 189 aaKnown RBP13.11□□□□□ -0.31
SIM1YIL123W RPL19BP0CX83 189 aaPredicted RBP13.11□□□□□ -0.31
SIM1YIL123W FRD1P32614 470 aaKnown RBP13.11□□□□□ -0.31
SIM1YIL123W ARL1P38116 183 aaKnown RBP13.11□□□□□ -0.31
SIM1YIL123W COG8Q04632 607 aa13.11□□□□□ -0.31
SIM1YIL123W TAH18Q12181 623 aa13.11□□□□□ -0.31
SIM1YIL123W UGA2P38067 497 aa13.1□□□□□ -0.31
SIM1YIL123W CIC1P38779 376 aaKnown RBP13.1□□□□□ -0.31
SIM1YIL123W HYR1P40581 163 aaKnown RBP13.1□□□□□ -0.31
SIM1YIL123W ENP2P48234 707 aaKnown RBP13.1□□□□□ -0.31
SIM1YIL123W KAR5Q04746 504 aa13.1□□□□□ -0.31
SIM1YIL123W MET1P36150 593 aa13.09□□□□□ -0.31
SIM1YIL123W PFF1P38244 976 aa13.09□□□□□ -0.31
SIM1YIL123W RPN1P38764 993 aaKnown RBP13.09□□□□□ -0.31
SIM1YIL123W SPL2P38839 148 aa13.09□□□□□ -0.31
SIM1YIL123W CYB2P00175 591 aa13.08□□□□□ -0.32
SIM1YIL123W GEF1P37020 779 aa13.08□□□□□ -0.32
SIM1YIL123W SLN1P39928 1220 aaPredicted RBP13.08□□□□□ -0.32
SIM1YIL123W SSF2Q12153 453 aaPredicted RBP13.08□□□□□ -0.32
SIM1YIL123W PRI1P10363 409 aa13.07□□□□□ -0.32
SIM1YIL123W KRE2P27809 442 aa13.07□□□□□ -0.32
SIM1YIL123W SKI2P35207 1287 aaKnown RBP RIP-Chip data13.07□□□□□ -0.32not detected
SIM1YIL123W SAS4Q04003 481 aa13.07□□□□□ -0.32
SIM1YIL123W INM2Q05533 292 aa13.07□□□□□ -0.32
SIM1YIL123W PGA3Q12746 312 aaKnown RBP13.07□□□□□ -0.32
SIM1YIL123W PEP3P27801 918 aa13.06□□□□□ -0.32
SIM1YIL123W IOC3P43596 787 aa13.06□□□□□ -0.32
SIM1YIL123W RPT4P53549 437 aaKnown RBP13.06□□□□□ -0.32
SIM1YIL123W TSR3Q12094 313 aaKnown RBP13.06□□□□□ -0.32
SIM1YIL123W CAF20P12962 161 aaKnown RBP13.05□□□□□ -0.32
SIM1YIL123W TTI1P36097 1038 aa13.05□□□□□ -0.32
SIM1YIL123W GRX7P38068 203 aa13.05□□□□□ -0.32
SIM1YIL123W IRC8P47046 822 aa13.05□□□□□ -0.32
SIM1YIL123W PSK2Q08217 1101 aa13.05□□□□□ -0.32
SIM1YIL123W YIR042CP40586 236 aa13.05□□□□□ -0.32
SIM1YIL123W CIR1P42940 261 aa13.05□□□□□ -0.32
SIM1YIL123W CTF18P49956 741 aa13.05□□□□□ -0.32
SIM1YIL123W ECM23Q02710 187 aa13.05□□□□□ -0.32
SIM1YIL123W ERO1Q03103 563 aa13.05□□□□□ -0.32
SIM1YIL123W UBX2Q04228 584 aa13.05□□□□□ -0.32
SIM1YIL123W FIG2P25653 1609 aa13.04□□□□□ -0.32
SIM1YIL123W MATALPHA2P0CY08 210 aa13.04□□□□□ -0.32
SIM1YIL123W HMLALPHA2P0CY09 210 aa13.04□□□□□ -0.32
SIM1YIL123W LCB1P25045 558 aaKnown RBP13.04□□□□□ -0.32
SIM1YIL123W VID28P40547 921 aa13.04□□□□□ -0.32
SIM1YIL123W YGL081WP53156 320 aa13.04□□□□□ -0.32
SIM1YIL123W ARP5P53946 755 aa13.04□□□□□ -0.32
SIM1YIL123W IRC4Q03036 179 aa13.04□□□□□ -0.32
SIM1YIL123W KEX1P09620 729 aa13.03□□□□□ -0.32
SIM1YIL123W FBP26P32604 452 aa13.03□□□□□ -0.32
SIM1YIL123W YHL017WP38745 532 aa13.03□□□□□ -0.32
SIM1YIL123W CRG1P38892 291 aaRIP-Chip data13.03□□□□□ -0.32not detected
SIM1YIL123W PPM2Q08282 695 aa13.03□□□□□ -0.32
SIM1YIL123W AIM44Q99299 758 aa13.03□□□□□ -0.32
SIM1YIL123W IMP2'P32351 346 aa13.02□□□□□ -0.33
SIM1YIL123W PRX1P34227 261 aaKnown RBP13.02□□□□□ -0.33
SIM1YIL123W YKE2P52553 114 aa13.02□□□□□ -0.33
SIM1YIL123W PEX14P53112 341 aa13.02□□□□□ -0.33
SIM1YIL123W SPN1Q06505 410 aaPredicted RBP13.02□□□□□ -0.33
SIM1YIL123W PSF3Q12146 194 aa13.02□□□□□ -0.33
SIM1YIL123W KNS1P32350 737 aaPredicted RBP13.01□□□□□ -0.33
SIM1YIL123W SMY1P32364 656 aaKnown RBP13.01□□□□□ -0.33
SIM1YIL123W ESF1Q06344 628 aaKnown RBP13.01□□□□□ -0.33
SIM1YIL123W ELG1Q12050 791 aa13.01□□□□□ -0.33
SIM1YIL123W YPL150WQ12152 901 aa13.01□□□□□ -0.33
SIM1YIL123W PMD1P32634 1753 aa13□□□□□ -0.33
SIM1YIL123W ERT1P38140 529 aa13□□□□□ -0.33
SIM1YIL123W COQ1P18900 473 aa12.99□□□□□ -0.33
SIM1YIL123W ELM1P32801 640 aa12.99□□□□□ -0.33
SIM1YIL123W YFH7P43591 353 aa12.99□□□□□ -0.33
SIM1YIL123W PEX19Q07418 342 aa12.99□□□□□ -0.33
SIM1YIL123W CPA2P03965 1118 aaKnown RBP12.98□□□□□ -0.33
SIM1YIL123W PTK1P36002 662 aaPredicted RBP12.98□□□□□ -0.33
SIM1YIL123W SIS2P36024 562 aa12.98□□□□□ -0.33
SIM1YIL123W BOI1P38041 980 aaKnown RBP12.98□□□□□ -0.33
SIM1YIL123W RSM25P40496 264 aa12.98□□□□□ -0.33
SIM1YIL123W YLR407WQ06070 228 aa12.98□□□□□ -0.33
SIM1YIL123W RPT3P33298 428 aaKnown RBP12.97□□□□□ -0.33
SIM1YIL123W RER2P35196 286 aa12.97□□□□□ -0.33
SIM1YIL123W YKL222CP35995 705 aa12.97□□□□□ -0.33
SIM1YIL123W KRE33P53914 1056 aaKnown RBP12.97□□□□□ -0.33
SIM1YIL123W RPN12P32496 274 aa12.96□□□□□ -0.33
SIM1YIL123W RRP8P38961 392 aaKnown RBP12.96□□□□□ -0.33
SIM1YIL123W RVS167P39743 482 aaKnown RBP12.96□□□□□ -0.33
SIM1YIL123W MSN5P52918 1224 aa12.96□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 77.1 ms