RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID28	YIL017C	NPA3	P47122	385 aa		4.66	□□□□□ -1.66
VID28	YIL017C	MAL13	P53338	473 aa		4.66	□□□□□ -1.66
VID28	YIL017C	YNL035C	P53962	389 aa	Known RBP	4.66	□□□□□ -1.66
VID28	YIL017C	COG4	Q06096	861 aa		4.66	□□□□□ -1.66
VID28	YIL017C	NDL1	Q06568	189 aa		4.66	□□□□□ -1.66
VID28	YIL017C	ATG9	Q12142	997 aa		4.66	□□□□□ -1.66
VID28	YIL017C	SEC14	P24280	304 aa	Known RBP	4.65	□□□□□ -1.66
VID28	YIL017C	TOA1	P32773	286 aa		4.65	□□□□□ -1.66
VID28	YIL017C	DLD1	P32891	587 aa		4.65	□□□□□ -1.66
VID28	YIL017C	SWE1	P32944	819 aa		4.65	□□□□□ -1.66
VID28	YIL017C	MRPS28	P21771	286 aa		4.65	□□□□□ -1.67
VID28	YIL017C	RFC1	P38630	861 aa	Known RBP	4.65	□□□□□ -1.67
VID28	YIL017C	KIC1	P38692	1080 aa		4.65	□□□□□ -1.67
VID28	YIL017C	YJL007C	P47080	104 aa		4.65	□□□□□ -1.67
VID28	YIL017C	RRP46	P53256	223 aa	Predicted RBP	4.65	□□□□□ -1.67
VID28	YIL017C	GYP5	Q12344	894 aa		4.65	□□□□□ -1.67
VID28	YIL017C	RPL5	P26321	297 aa	Known RBP	4.65	□□□□□ -1.67
VID28	YIL017C	MUD2	P36084	527 aa	Known RBP	4.65	□□□□□ -1.67
VID28	YIL017C	CWH41	P53008	833 aa		4.65	□□□□□ -1.67
VID28	YIL017C	YOR389W	Q08912	624 aa		4.65	□□□□□ -1.67
VID28	YIL017C	TYW1	Q08960	810 aa	Known RBP	4.65	□□□□□ -1.67
VID28	YIL017C	GIN4	Q12263	1142 aa		4.65	□□□□□ -1.67
VID28	YIL017C	BIK1	P11709	440 aa		4.64	□□□□□ -1.67
VID28	YIL017C	KEX2	P13134	814 aa		4.64	□□□□□ -1.67
VID28	YIL017C	PSO2	P30620	661 aa		4.64	□□□□□ -1.67
VID28	YIL017C	ORC1	P54784	914 aa	Predicted RBP	4.64	□□□□□ -1.67
VID28	YIL017C	DOS2	P54858	310 aa		4.64	□□□□□ -1.67
VID28	YIL017C	YML020W	Q03722	664 aa		4.64	□□□□□ -1.67
VID28	YIL017C	YKL068W-A	Q3E826	78 aa		4.64	□□□□□ -1.67
VID28	YIL017C	SEC7	P11075	2009 aa	Known RBP	4.64	□□□□□ -1.67
VID28	YIL017C	SSA1	P10591	642 aa	Known RBP	4.64	□□□□□ -1.67
VID28	YIL017C	RPC82	P32349	654 aa		4.64	□□□□□ -1.67
VID28	YIL017C	HOS4	P40480	1083 aa		4.64	□□□□□ -1.67
VID28	YIL017C	VTC3	Q02725	835 aa		4.64	□□□□□ -1.67
VID28	YIL017C	TLG1	Q03322	224 aa		4.64	□□□□□ -1.67
VID28	YIL017C	THI22	Q06490	572 aa		4.64	□□□□□ -1.67
VID28	YIL017C	URB1	P34241	1764 aa	Known RBP	4.63	□□□□□ -1.67
VID28	YIL017C	TAF5	P38129	798 aa		4.63	□□□□□ -1.67
VID28	YIL017C	CTK3	P46963	296 aa	Predicted RBP	4.63	□□□□□ -1.67
VID28	YIL017C	NIS1	P53939	407 aa		4.63	□□□□□ -1.67
VID28	YIL017C	YRF1-2	P40105	1681 aa		4.63	□□□□□ -1.67
VID28	YIL017C	CDC16	P09798	840 aa		4.63	□□□□□ -1.67
VID28	YIL017C	TIF1	P10081	395 aa	Known RBP	4.63	□□□□□ -1.67
VID28	YIL017C	SPE2	P21182	396 aa		4.63	□□□□□ -1.67
VID28	YIL017C	PRD1	P25375	712 aa		4.63	□□□□□ -1.67
VID28	YIL017C	GEF1	P37020	779 aa		4.63	□□□□□ -1.67
VID28	YIL017C	SAP1	P39955	897 aa	Known RBP	4.63	□□□□□ -1.67
VID28	YIL017C	RSC8	P43609	557 aa	Known RBP	4.63	□□□□□ -1.67
VID28	YIL017C	BCK1	Q01389	1478 aa		4.62	□□□□□ -1.67
VID28	YIL017C	AI4	P03878	556 aa		4.62	□□□□□ -1.67
VID28	YIL017C	ERG12	P07277	443 aa		4.62	□□□□□ -1.67
VID28	YIL017C	MPH3	P0CE00	602 aa		4.62	□□□□□ -1.67
VID28	YIL017C	DAL5	P15365	543 aa		4.62	□□□□□ -1.67
VID28	YIL017C	CDC10	P25342	322 aa	Known RBP	4.62	□□□□□ -1.67
VID28	YIL017C	PPX1	P38698	397 aa		4.62	□□□□□ -1.67
VID28	YIL017C	RTR1	P40084	226 aa	Predicted RBP	4.62	□□□□□ -1.67
VID28	YIL017C	TIM50	Q02776	476 aa		4.62	□□□□□ -1.67
VID28	YIL017C	YBL029C-A	Q3E756	94 aa		4.62	□□□□□ -1.67
VID28	YIL017C	YEL043W	P32618	956 aa		4.62	□□□□□ -1.67
VID28	YIL017C	NPR3	P38742	1146 aa		4.62	□□□□□ -1.67
VID28	YIL017C	PEX19	Q07418	342 aa		4.62	□□□□□ -1.67
VID28	YIL017C	UTP10	P42945	1769 aa	Known RBP	4.61	□□□□□ -1.67
VID28	YIL017C	DPB3	P27344	201 aa		4.61	□□□□□ -1.67
VID28	YIL017C	BIO2	P32451	375 aa		4.61	□□□□□ -1.67
VID28	YIL017C	CDC11	P32458	415 aa		4.61	□□□□□ -1.67
VID28	YIL017C	TTI1	P36097	1038 aa		4.61	□□□□□ -1.67
VID28	YIL017C	OLA1	P38219	394 aa	Known RBP	4.61	□□□□□ -1.67
VID28	YIL017C	PXA1	P41909	870 aa		4.61	□□□□□ -1.67
VID28	YIL017C	TLG2	Q08144	397 aa		4.61	□□□□□ -1.67
VID28	YIL017C	TRL1	P09880	827 aa	Known RBP	4.61	□□□□□ -1.67
VID28	YIL017C	ATE1	P16639	503 aa		4.61	□□□□□ -1.67
VID28	YIL017C	YSW1	P38280	609 aa		4.61	□□□□□ -1.67
VID28	YIL017C	SLX8	P40072	274 aa		4.61	□□□□□ -1.67
VID28	YIL017C	PEA2	P40091	420 aa		4.61	□□□□□ -1.67
VID28	YIL017C	CCT5	P40413	562 aa	Known RBP	4.61	□□□□□ -1.67
VID28	YIL017C	MPH1	P40562	993 aa		4.61	□□□□□ -1.67
VID28	YIL017C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
VID28	YIL017C	NCS2	P53923	493 aa	Predicted RBP	4.61	□□□□□ -1.67
VID28	YIL017C	GRX3	Q03835	250 aa		4.61	□□□□□ -1.67
VID28	YIL017C	VPS20	Q04272	221 aa		4.61	□□□□□ -1.67
VID28	YIL017C	SPT16	P32558	1035 aa	Known RBP	4.6	□□□□□ -1.67
VID28	YIL017C	PET100	P38958	111 aa		4.6	□□□□□ -1.67
VID28	YIL017C	HST2	P53686	357 aa		4.6	□□□□□ -1.67
VID28	YIL017C	FPK1	P53739	893 aa		4.6	□□□□□ -1.67
VID28	YIL017C	STE23	Q06010	1027 aa		4.6	□□□□□ -1.67
VID28	YIL017C	NKP2	Q06162	153 aa		4.6	□□□□□ -1.67
VID28	YIL017C	YOL036W	Q08206	761 aa		4.6	□□□□□ -1.67
VID28	YIL017C	YPL225W	Q08971	146 aa	Known RBP	4.6	□□□□□ -1.67
VID28	YIL017C	DDP1	Q99321	188 aa	Known RBP	4.6	□□□□□ -1.67
VID28	YIL017C	TPD3	P31383	635 aa		4.6	□□□□□ -1.67
VID28	YIL017C	DCW1	P36091	449 aa		4.6	□□□□□ -1.67
VID28	YIL017C	YGL082W	P53155	381 aa		4.6	□□□□□ -1.67
VID28	YIL017C	TAP42	Q04372	366 aa		4.6	□□□□□ -1.67
VID28	YIL017C	YLL054C	Q12244	843 aa		4.6	□□□□□ -1.67
VID28	YIL017C	CLN1	P20437	546 aa		4.59	□□□□□ -1.67
VID28	YIL017C	DPH5	P32469	300 aa	Predicted RBP	4.59	□□□□□ -1.67
VID28	YIL017C	RRP14	P36080	434 aa	Known RBP	4.59	□□□□□ -1.67
VID28	YIL017C	SLI15	P38283	698 aa		4.59	□□□□□ -1.67
VID28	YIL017C	DNM1	P54861	757 aa		4.59	□□□□□ -1.67
VID28	YIL017C	UBX2	Q04228	584 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms