RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	PIN2	Q12057	282 aa		6.35	□□□□□ -1.39
SNL1	YIL016W	SPC42	P36094	363 aa		6.34	□□□□□ -1.39
SNL1	YIL016W	LDH1	P38139	375 aa		6.34	□□□□□ -1.39
SNL1	YIL016W	RNH70	P53331	553 aa		6.34	□□□□□ -1.39
SNL1	YIL016W	RMD1	Q03441	430 aa		6.34	□□□□□ -1.39
SNL1	YIL016W	WRS1	Q12109	432 aa	Known RBP	6.34	□□□□□ -1.39
SNL1	YIL016W	CYC8	P14922	966 aa		6.33	□□□□□ -1.4
SNL1	YIL016W	CLN2	P20438	545 aa		6.33	□□□□□ -1.4
SNL1	YIL016W	YGR122W	P53272	402 aa		6.33	□□□□□ -1.4
SNL1	YIL016W	RSC4	Q02206	625 aa		6.33	□□□□□ -1.4
SNL1	YIL016W	PET112	P33893	541 aa		6.32	□□□□□ -1.4
SNL1	YIL016W	CIC1	P38779	376 aa	Known RBP	6.32	□□□□□ -1.4
SNL1	YIL016W	RAD55	P38953	406 aa		6.32	□□□□□ -1.4
SNL1	YIL016W	FIR1	P40020	876 aa		6.32	□□□□□ -1.4
SNL1	YIL016W	YNL165W	P53891	406 aa		6.32	□□□□□ -1.4
SNL1	YIL016W	YAF9	P53930	226 aa		6.32	□□□□□ -1.4
SNL1	YIL016W	BSC2	Q05611	235 aa		6.32	□□□□□ -1.4
SNL1	YIL016W	ESF1	Q06344	628 aa	Known RBP	6.32	□□□□□ -1.4
SNL1	YIL016W	RAD2	P07276	1031 aa		6.31	□□□□□ -1.4
SNL1	YIL016W	YKL091C	P33324	310 aa	Known RBP	6.31	□□□□□ -1.4
SNL1	YIL016W	VRP1	P37370	817 aa		6.31	□□□□□ -1.4
SNL1	YIL016W	NMD2	P38798	1089 aa	Known RBP	6.31	□□□□□ -1.4
SNL1	YIL016W	RTT106	P40161	455 aa		6.31	□□□□□ -1.4
SNL1	YIL016W	DAL4	Q04895	635 aa		6.31	□□□□□ -1.4
SNL1	YIL016W	INP54	Q08227	384 aa	Known RBP	6.31	□□□□□ -1.4
SNL1	YIL016W	PPG1	P32838	368 aa		6.3	□□□□□ -1.4
SNL1	YIL016W	FAA3	P39002	694 aa		6.3	□□□□□ -1.4
SNL1	YIL016W	QDR2	P40474	542 aa		6.3	□□□□□ -1.4
SNL1	YIL016W	MSN1	P22148	382 aa		6.29	□□□□□ -1.4
SNL1	YIL016W	MLF3	P32047	452 aa		6.29	□□□□□ -1.4
SNL1	YIL016W	DYS1	P38791	387 aa		6.29	□□□□□ -1.4
SNL1	YIL016W	RGD2	P43556	714 aa		6.29	□□□□□ -1.4
SNL1	YIL016W	IOC3	P43596	787 aa		6.29	□□□□□ -1.4
SNL1	YIL016W	MTO1	P53070	669 aa		6.29	□□□□□ -1.4
SNL1	YIL016W	HXK1	P04806	485 aa	Known RBP	6.28	□□□□□ -1.4
SNL1	YIL016W	MNR2	P35724	969 aa		6.28	□□□□□ -1.4
SNL1	YIL016W	YHL008C	P38750	627 aa		6.28	□□□□□ -1.4
SNL1	YIL016W	NTA1	P40354	457 aa		6.28	□□□□□ -1.4
SNL1	YIL016W	MRPS18	P42847	217 aa		6.28	□□□□□ -1.4
SNL1	YIL016W	DOS2	P54858	310 aa		6.28	□□□□□ -1.4
SNL1	YIL016W	TIF6	Q12522	245 aa	Known RBP	6.28	□□□□□ -1.4
SNL1	YIL016W	IRS4	P36115	615 aa	Known RBP	6.27	□□□□□ -1.41
SNL1	YIL016W	PSY2	P40164	858 aa		6.27	□□□□□ -1.41
SNL1	YIL016W	HED1	Q03937	162 aa		6.27	□□□□□ -1.41
SNL1	YIL016W	SSF2	Q12153	453 aa	Predicted RBP	6.27	□□□□□ -1.41
SNL1	YIL016W	CIT2	P08679	460 aa		6.26	□□□□□ -1.41
SNL1	YIL016W	KAP122	P32767	1081 aa		6.26	□□□□□ -1.41
SNL1	YIL016W	NSE3	Q05541	303 aa		6.26	□□□□□ -1.41
SNL1	YIL016W	YCS4	Q06156	1176 aa		6.26	□□□□□ -1.41
SNL1	YIL016W	UTP4	Q06679	776 aa	Known RBP	6.26	□□□□□ -1.41
SNL1	YIL016W	RPS31	P05759	152 aa	Known RBP	6.25	□□□□□ -1.41
SNL1	YIL016W	SSN3	P39073	555 aa		6.25	□□□□□ -1.41
SNL1	YIL016W	GDE1	Q02979	1223 aa		6.25	□□□□□ -1.41
SNL1	YIL016W	CDC53	Q12018	815 aa	Known RBP	6.25	□□□□□ -1.41
SNL1	YIL016W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
SNL1	YIL016W	PRP40	P33203	583 aa	Known RBP	6.24	□□□□□ -1.41
SNL1	YIL016W	YTA6	P40328	754 aa		6.24	□□□□□ -1.41
SNL1	YIL016W	OSW7	P43611	510 aa		6.24	□□□□□ -1.41
SNL1	YIL016W	CLA4	P48562	842 aa		6.24	□□□□□ -1.41
SNL1	YIL016W	FLP1	P03870	423 aa		6.23	□□□□□ -1.41
SNL1	YIL016W	PRI2	P20457	528 aa		6.23	□□□□□ -1.41
SNL1	YIL016W	PRE9	P23638	258 aa	Known RBP	6.23	□□□□□ -1.41
SNL1	YIL016W	GRX1	P25373	110 aa	Known RBP	6.23	□□□□□ -1.41
SNL1	YIL016W	UGA3	P26370	528 aa		6.23	□□□□□ -1.41
SNL1	YIL016W	UGA4	P32837	571 aa		6.23	□□□□□ -1.41
SNL1	YIL016W	SHM1	P37292	490 aa	Predicted RBP	6.23	□□□□□ -1.41
SNL1	YIL016W	ISW1	P38144	1129 aa		6.23	□□□□□ -1.41
SNL1	YIL016W	BSD2	P38356	321 aa		6.23	□□□□□ -1.41
SNL1	YIL016W	RGA1	P39083	1007 aa		6.23	□□□□□ -1.41
SNL1	YIL016W	MON1	P53129	644 aa		6.23	□□□□□ -1.41
SNL1	YIL016W	MET32	Q12041	191 aa		6.23	□□□□□ -1.41
SNL1	YIL016W	MCD1	Q12158	566 aa		6.23	□□□□□ -1.41
SNL1	YIL016W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	not detected
SNL1	YIL016W	SIS1	P25294	352 aa	Known RBP	6.22	□□□□□ -1.41
SNL1	YIL016W	IRE1	P32361	1115 aa		6.22	□□□□□ -1.41
SNL1	YIL016W	ECM2	P38241	364 aa	Known RBP	6.22	□□□□□ -1.41
SNL1	YIL016W	YBR287W	P38355	427 aa		6.22	□□□□□ -1.41
SNL1	YIL016W	JJJ2	P46997	583 aa		6.22	□□□□□ -1.41
SNL1	YIL016W	YJL049W	P47048	450 aa		6.22	□□□□□ -1.41
SNL1	YIL016W	FAR11	P53917	953 aa		6.22	□□□□□ -1.41
SNL1	YIL016W	YOR131C	Q12486	218 aa		6.22	□□□□□ -1.41
SNL1	YIL016W	MCM5	P29496	775 aa	Known RBP	6.21	□□□□□ -1.42
SNL1	YIL016W	GIP1	P38229	639 aa		6.21	□□□□□ -1.42
SNL1	YIL016W	FAA4	P47912	694 aa	Known RBP	6.21	□□□□□ -1.42
SNL1	YIL016W	ARG82	P07250	355 aa		6.2	□□□□□ -1.42
SNL1	YIL016W	KAR2	P16474	682 aa	Known RBP	6.2	□□□□□ -1.42
SNL1	YIL016W	AIM46	P38885	310 aa		6.2	□□□□□ -1.42
SNL1	YIL016W	ALG12	P53730	551 aa		6.2	□□□□□ -1.42
SNL1	YIL016W	RPN4	Q03465	531 aa		6.2	□□□□□ -1.42
SNL1	YIL016W	CDC34	P14682	295 aa		6.19	□□□□□ -1.42
SNL1	YIL016W	RRP14	P36080	434 aa	Known RBP	6.19	□□□□□ -1.42
SNL1	YIL016W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	6.19	□□□□□ -1.42	not detected
SNL1	YIL016W	AAD14	P42884	376 aa		6.19	□□□□□ -1.42
SNL1	YIL016W	MSN5	P52918	1224 aa		6.19	□□□□□ -1.42
SNL1	YIL016W	HUL5	P53119	910 aa		6.19	□□□□□ -1.42
SNL1	YIL016W	CTR9	P89105	1077 aa		6.19	□□□□□ -1.42
SNL1	YIL016W	ULP1	Q02724	621 aa		6.19	□□□□□ -1.42
SNL1	YIL016W	YPL109C	Q02981	657 aa		6.19	□□□□□ -1.42
SNL1	YIL016W	YOR296W	Q08748	1289 aa		6.19	□□□□□ -1.42
SNL1	YIL016W	AMS1	P22855	1083 aa		6.18	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms