RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W VPS4P52917 437 aa6.13□□□□□ -1.43
MSH1YHR120W IRC4Q03036 179 aa6.13□□□□□ -1.43
MSH1YHR120W VHR2P40041 505 aa6.12□□□□□ -1.43
MSH1YHR120W TOS4Q06266 489 aa6.12□□□□□ -1.43
MSH1YHR120W AIM7Q12156 149 aa6.12□□□□□ -1.43
MSH1YHR120W YGR117CP53270 476 aa6.12□□□□□ -1.43
MSH1YHR120W PRP42Q03776 544 aaKnown RBP6.12□□□□□ -1.43
MSH1YHR120W CRF1Q04930 467 aa6.12□□□□□ -1.43
MSH1YHR120W POM152P39685 1337 aa6.12□□□□□ -1.43
MSH1YHR120W RAD2P07276 1031 aa6.11□□□□□ -1.43
MSH1YHR120W EMP47P43555 445 aa6.11□□□□□ -1.43
MSH1YHR120W HPR1P17629 752 aaKnown RBP6.11□□□□□ -1.43
MSH1YHR120W SLA1P32790 1244 aa6.11□□□□□ -1.43
MSH1YHR120W YNG2P38806 282 aaKnown RBP6.11□□□□□ -1.43
MSH1YHR120W ILV3P39522 585 aaKnown RBP6.1□□□□□ -1.43
MSH1YHR120W NUG1P40010 520 aaKnown RBP6.1□□□□□ -1.43
MSH1YHR120W SPO1P53541 631 aa6.1□□□□□ -1.43
MSH1YHR120W ARG82P07250 355 aa6.1□□□□□ -1.43
MSH1YHR120W GCD7P32502 381 aaPredicted RBP6.1□□□□□ -1.43
MSH1YHR120W CLC1P17891 233 aa6.09□□□□□ -1.43
MSH1YHR120W PEA2P40091 420 aa6.09□□□□□ -1.43
MSH1YHR120W WRS1Q12109 432 aaKnown RBP6.09□□□□□ -1.43
MSH1YHR120W GYP5Q12344 894 aa6.09□□□□□ -1.43
MSH1YHR120W SEC18P18759 758 aaKnown RBP6.09□□□□□ -1.43
MSH1YHR120W RPS7AP26786 190 aaKnown RBP6.09□□□□□ -1.43
MSH1YHR120W YIL089WP40500 205 aa6.09□□□□□ -1.43
MSH1YHR120W HGH1P48362 394 aaKnown RBP6.09□□□□□ -1.43
MSH1YHR120W SSF1P38789 453 aaPredicted RBP6.08□□□□□ -1.44
MSH1YHR120W PSF3Q12146 194 aa6.08□□□□□ -1.44
MSH1YHR120W GLO3P38682 493 aaKnown RBP6.08□□□□□ -1.44
MSH1YHR120W UTP7P40055 554 aaKnown RBP6.08□□□□□ -1.44
MSH1YHR120W JJJ2P46997 583 aa6.08□□□□□ -1.44
MSH1YHR120W SEN54Q02825 467 aaPredicted RBP6.08□□□□□ -1.44
MSH1YHR120W AI2P03876 854 aa6.08□□□□□ -1.44
MSH1YHR120W RPT3P33298 428 aaKnown RBP6.07□□□□□ -1.44
MSH1YHR120W ETP1P38748 585 aaKnown RBP6.07□□□□□ -1.44
MSH1YHR120W ACK1Q07622 623 aaPredicted RBP6.07□□□□□ -1.44
MSH1YHR120W YFH7P43591 353 aa6.07□□□□□ -1.44
MSH1YHR120W MTC3P53077 123 aa6.07□□□□□ -1.44
MSH1YHR120W EAF7P53911 425 aaKnown RBP6.07□□□□□ -1.44
MSH1YHR120W TOM1Q03280 3268 aa6.06□□□□□ -1.44
MSH1YHR120W POL32P47110 350 aa6.06□□□□□ -1.44
MSH1YHR120W YNL193WP53870 558 aa6.06□□□□□ -1.44
MSH1YHR120W CWC15Q03772 175 aaKnown RBP6.06□□□□□ -1.44
MSH1YHR120W PUF6Q04373 656 aaKnown RBP6.06□□□□□ -1.44
MSH1YHR120W RPL17AP05740 184 aaKnown RBP6.06□□□□□ -1.44
MSH1YHR120W CBP1P07252 654 aa6.06□□□□□ -1.44
MSH1YHR120W HAL5P38970 855 aaKnown RBP6.06□□□□□ -1.44
MSH1YHR120W YIR042CP40586 236 aa6.06□□□□□ -1.44
MSH1YHR120W RPL17BP46990 184 aaKnown RBP6.06□□□□□ -1.44
MSH1YHR120W YJL171CP46992 396 aa6.06□□□□□ -1.44
MSH1YHR120W RPN7Q06103 429 aaKnown RBP6.06□□□□□ -1.44
MSH1YHR120W SNF7P39929 240 aaKnown RBP6.05□□□□□ -1.44
MSH1YHR120W TYW1Q08960 810 aaKnown RBP6.05□□□□□ -1.44
MSH1YHR120W RRI2Q12348 645 aa6.05□□□□□ -1.44
MSH1YHR120W INM2Q05533 292 aa6.05□□□□□ -1.44
MSH1YHR120W PIF1P07271 859 aa6.04□□□□□ -1.44
MSH1YHR120W SNF3P10870 884 aa6.04□□□□□ -1.44
MSH1YHR120W KTR3P38130 404 aaPredicted RBP6.04□□□□□ -1.44
MSH1YHR120W PUS6P53294 404 aa6.04□□□□□ -1.44
MSH1YHR120W NCB2Q92317 146 aa6.04□□□□□ -1.44
MSH1YHR120W PTK1P36002 662 aaPredicted RBP6.04□□□□□ -1.44
MSH1YHR120W DUS1P53759 423 aaKnown RBP6.04□□□□□ -1.44
MSH1YHR120W PNT1P38969 423 aa6.03□□□□□ -1.44
MSH1YHR120W FLO1P32768 1537 aa6.03□□□□□ -1.44
MSH1YHR120W YPR148CQ06523 435 aa6.03□□□□□ -1.44
MSH1YHR120W APL6P46682 809 aa6.02□□□□□ -1.45
MSH1YHR120W YGL242CP53066 181 aa6.02□□□□□ -1.45
MSH1YHR120W CSR2Q12734 1121 aa6.02□□□□□ -1.45
MSH1YHR120W GSC2P40989 1895 aa6.02□□□□□ -1.45
MSH1YHR120W NMD2P38798 1089 aaKnown RBP6.02□□□□□ -1.45
MSH1YHR120W NIT1P40447 199 aa6.02□□□□□ -1.45
MSH1YHR120W MDL2P33311 773 aa6.01□□□□□ -1.45
MSH1YHR120W AVT3P36062 692 aa6.01□□□□□ -1.45
MSH1YHR120W CDC27P38042 758 aa6.01□□□□□ -1.45
MSH1YHR120W HVG1P0CE11 249 aa6.01□□□□□ -1.45
MSH1YHR120W PCT1P13259 424 aa6.01□□□□□ -1.45
MSH1YHR120W RRT6P53117 311 aaPredicted RBP6.01□□□□□ -1.45
MSH1YHR120W UBP10P53874 792 aaPredicted RBP6.01□□□□□ -1.45
MSH1YHR120W NSG2P53898 299 aa6.01□□□□□ -1.45
MSH1YHR120W LSP1Q12230 341 aaKnown RBP6.01□□□□□ -1.45
MSH1YHR120W NOT3P06102 836 aaKnown RBP6□□□□□ -1.45
MSH1YHR120W ROX1P25042 368 aa6□□□□□ -1.45
MSH1YHR120W BDP1P46678 594 aa6□□□□□ -1.45
MSH1YHR120W ALO1P54783 526 aaKnown RBP6□□□□□ -1.45
MSH1YHR120W CYB2P00175 591 aa6□□□□□ -1.45
MSH1YHR120W GRX7P38068 203 aa6□□□□□ -1.45
MSH1YHR120W BSD2P38356 321 aa6□□□□□ -1.45
MSH1YHR120W MLC1P53141 149 aa6□□□□□ -1.45
MSH1YHR120W ECM16Q04217 1267 aaKnown RBP6□□□□□ -1.45
MSH1YHR120W GAL2P13181 574 aa6□□□□□ -1.45
MSH1YHR120W BOI1P38041 980 aaKnown RBP6□□□□□ -1.45
MSH1YHR120W PCS60P38137 543 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
MSH1YHR120W EPS1P40557 701 aa6□□□□□ -1.45
MSH1YHR120W PDR18P53756 1333 aa6□□□□□ -1.45
MSH1YHR120W ECM21P38167 1117 aaKnown RBP5.99□□□□□ -1.45
MSH1YHR120W KEL1P38853 1164 aaKnown RBP5.99□□□□□ -1.45
MSH1YHR120W TIF6Q12522 245 aaKnown RBP5.99□□□□□ -1.45
MSH1YHR120W RAD53P22216 821 aa5.98□□□□□ -1.45
MSH1YHR120W ADP1P25371 1049 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms