RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C SRC1Q03707 834 aa9.15□□□□□ -0.94
PUP2YGR253C LCB1P25045 558 aaKnown RBP9.14□□□□□ -0.95
PUP2YGR253C PAM1P37304 830 aaKnown RBP9.14□□□□□ -0.95
PUP2YGR253C HEF3P53978 1044 aaKnown RBP9.14□□□□□ -0.95
PUP2YGR253C ARG82P07250 355 aa9.13□□□□□ -0.95
PUP2YGR253C MTC3P53077 123 aa9.13□□□□□ -0.95
PUP2YGR253C RBA50Q04418 439 aa9.13□□□□□ -0.95
PUP2YGR253C NIT1P40447 199 aa9.12□□□□□ -0.95
PUP2YGR253C YGR122WP53272 402 aa9.12□□□□□ -0.95
PUP2YGR253C GAL2P13181 574 aa9.11□□□□□ -0.95
PUP2YGR253C JJJ2P46997 583 aa9.11□□□□□ -0.95
PUP2YGR253C MTC5Q03897 1148 aa9.11□□□□□ -0.95
PUP2YGR253C YDL144CQ07589 356 aa9.11□□□□□ -0.95
PUP2YGR253C ACK1Q07622 623 aaPredicted RBP9.11□□□□□ -0.95
PUP2YGR253C WRS1Q12109 432 aaKnown RBP9.11□□□□□ -0.95
PUP2YGR253C SUP35P05453 685 aaKnown RBP9.1□□□□□ -0.95
PUP2YGR253C JIP4Q03361 876 aa9.1□□□□□ -0.95
PUP2YGR253C SWC3P31376 625 aa9.09□□□□□ -0.95
PUP2YGR253C HXT10P43581 546 aa9.09□□□□□ -0.95
PUP2YGR253C YJL171CP46992 396 aa9.09□□□□□ -0.95
PUP2YGR253C SNU66Q12420 587 aaPredicted RBP9.09□□□□□ -0.95
PUP2YGR253C UBP12P39538 1254 aa9.08□□□□□ -0.96
PUP2YGR253C NOP8Q08287 484 aaPredicted RBP9.08□□□□□ -0.96
PUP2YGR253C PSF3Q12146 194 aa9.08□□□□□ -0.96
PUP2YGR253C RPL17AP05740 184 aaKnown RBP9.07□□□□□ -0.96
PUP2YGR253C ASH1P34233 588 aa9.07□□□□□ -0.96
PUP2YGR253C NUG1P40010 520 aaKnown RBP9.07□□□□□ -0.96
PUP2YGR253C RPL17BP46990 184 aaKnown RBP9.07□□□□□ -0.96
PUP2YGR253C RAD24P32641 659 aa9.06□□□□□ -0.96
PUP2YGR253C SGD1Q06132 899 aa9.06□□□□□ -0.96
PUP2YGR253C RPT3P33298 428 aaKnown RBP9.05□□□□□ -0.96
PUP2YGR253C YFH7P43591 353 aa9.05□□□□□ -0.96
PUP2YGR253C PUS6P53294 404 aa9.05□□□□□ -0.96
PUP2YGR253C PEX29Q03370 554 aa9.05□□□□□ -0.96
PUP2YGR253C GIN4Q12263 1142 aa9.05□□□□□ -0.96
PUP2YGR253C PFK2P16862 959 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96not detected
PUP2YGR253C YLR225CQ05948 407 aaKnown RBP9.04□□□□□ -0.96
PUP2YGR253C ADR1P07248 1323 aa9.04□□□□□ -0.96
PUP2YGR253C DUR1,2P32528 1835 aaKnown RBP9.03□□□□□ -0.96
PUP2YGR253C SPR3P41901 512 aa9.03□□□□□ -0.96
PUP2YGR253C YKR023WP36119 530 aaKnown RBP9.02□□□□□ -0.97
PUP2YGR253C TPS3P38426 1054 aaKnown RBP9.02□□□□□ -0.97
PUP2YGR253C KEL1P38853 1164 aaKnown RBP9.02□□□□□ -0.97
PUP2YGR253C PPM2Q08282 695 aa9.01□□□□□ -0.97
PUP2YGR253C RAD53P22216 821 aa9□□□□□ -0.97
PUP2YGR253C MAL31P38156 614 aa9□□□□□ -0.97
PUP2YGR253C BOI2P39969 1040 aa9□□□□□ -0.97
PUP2YGR253C YPP1P46951 817 aa9□□□□□ -0.97
PUP2YGR253C PMA1P05030 918 aaKnown RBP8.98□□□□□ -0.97
PUP2YGR253C SUI2P20459 304 aaKnown RBP8.98□□□□□ -0.97
PUP2YGR253C APL6P46682 809 aa8.98□□□□□ -0.97
PUP2YGR253C ADP1P25371 1049 aa8.97□□□□□ -0.97
PUP2YGR253C PAH1P32567 862 aa8.97□□□□□ -0.97
PUP2YGR253C IXR1P33417 597 aa8.97□□□□□ -0.97
PUP2YGR253C PTK1P36002 662 aaPredicted RBP8.97□□□□□ -0.97
PUP2YGR253C ERG7P38604 731 aa8.97□□□□□ -0.97
PUP2YGR253C YIR042CP40586 236 aa8.97□□□□□ -0.97
PUP2YGR253C CSI1Q04368 295 aa8.97□□□□□ -0.97
PUP2YGR253C SNF3P10870 884 aa8.96□□□□□ -0.98
PUP2YGR253C SEC18P18759 758 aaKnown RBP8.96□□□□□ -0.98
PUP2YGR253C SLA1P32790 1244 aa8.96□□□□□ -0.98
PUP2YGR253C PSF2P40359 213 aa8.96□□□□□ -0.98
PUP2YGR253C ULP1Q02724 621 aa8.96□□□□□ -0.98
PUP2YGR253C INM2Q05533 292 aa8.96□□□□□ -0.98
PUP2YGR253C RRI2Q12348 645 aa8.96□□□□□ -0.98
PUP2YGR253C MDL2P33311 773 aa8.95□□□□□ -0.98
PUP2YGR253C GLO3P38682 493 aaKnown RBP8.95□□□□□ -0.98
PUP2YGR253C NET1P47035 1189 aa8.95□□□□□ -0.98
PUP2YGR253C GYP5Q12344 894 aa8.95□□□□□ -0.98
PUP2YGR253C FBP1P09201 348 aa8.94□□□□□ -0.98
PUP2YGR253C OCT1P35999 772 aa8.94□□□□□ -0.98
PUP2YGR253C YBL028CP38202 106 aa8.94□□□□□ -0.98
PUP2YGR253C ACA1P39970 489 aa8.94□□□□□ -0.98
PUP2YGR253C ATG1P53104 897 aa8.93□□□□□ -0.98
PUP2YGR253C MAK21Q12176 1025 aaKnown RBP8.93□□□□□ -0.98
PUP2YGR253C YDJ1P25491 409 aaKnown RBP8.92□□□□□ -0.98
PUP2YGR253C SPT21P35209 758 aa8.92□□□□□ -0.98
PUP2YGR253C HAL5P38970 855 aaKnown RBP8.92□□□□□ -0.98
PUP2YGR253C NSG2P53898 299 aa8.92□□□□□ -0.98
PUP2YGR253C TUB2P02557 457 aaKnown RBP8.91□□□□□ -0.98
PUP2YGR253C AI2P03876 854 aa8.91□□□□□ -0.98
PUP2YGR253C RPP0P05317 312 aaKnown RBP8.91□□□□□ -0.98
PUP2YGR253C MCD4P36051 919 aa8.91□□□□□ -0.98
PUP2YGR253C AVT3P36062 692 aa8.91□□□□□ -0.98
PUP2YGR253C YNL193WP53870 558 aa8.91□□□□□ -0.98
PUP2YGR253C PCL8Q08966 492 aa8.91□□□□□ -0.98
PUP2YGR253C CFT2Q12102 859 aaPredicted RBP8.91□□□□□ -0.98
PUP2YGR253C RPS19AP07280 144 aaKnown RBP8.9□□□□□ -0.98
PUP2YGR253C RPS19BP07281 144 aaPredicted RBP8.9□□□□□ -0.98
PUP2YGR253C NOP2P40991 618 aaKnown RBP8.9□□□□□ -0.98
PUP2YGR253C PIF1P07271 859 aa8.89□□□□□ -0.99
PUP2YGR253C CDC60P26637 1090 aaKnown RBP8.89□□□□□ -0.99
PUP2YGR253C CDC27P38042 758 aa8.89□□□□□ -0.99
PUP2YGR253C VPS27P40343 622 aaKnown RBP8.89□□□□□ -0.99
PUP2YGR253C LYS14P40971 790 aa8.89□□□□□ -0.99
PUP2YGR253C VPS62P53285 467 aa8.89□□□□□ -0.99
PUP2YGR253C RPN7Q06103 429 aaKnown RBP8.89□□□□□ -0.99
PUP2YGR253C TY3A-GQ12173 290 aa8.89□□□□□ -0.99
PUP2YGR253C TY3A-IQ99219 290 aa8.89□□□□□ -0.99
PUP2YGR253C FLO1P32768 1537 aa8.89□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms