RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W HEF3P53978 1044 aaKnown RBP11.3□□□□□ -0.6
CPD1YGR247W PSF3Q12146 194 aa11.3□□□□□ -0.6
CPD1YGR247W SUP35P05453 685 aaKnown RBP11.29□□□□□ -0.6
CPD1YGR247W YJL171CP46992 396 aa11.29□□□□□ -0.6
CPD1YGR247W JJJ2P46997 583 aa11.29□□□□□ -0.6
CPD1YGR247W WRS1Q12109 432 aaKnown RBP11.29□□□□□ -0.6
CPD1YGR247W TPD3P31383 635 aa11.28□□□□□ -0.6
CPD1YGR247W NUG1P40010 520 aaKnown RBP11.28□□□□□ -0.6
CPD1YGR247W JIP4Q03361 876 aa11.27□□□□□ -0.61
CPD1YGR247W ASH1P34233 588 aa11.26□□□□□ -0.61
CPD1YGR247W YKR023WP36119 530 aaKnown RBP11.25□□□□□ -0.61
CPD1YGR247W SGD1Q06132 899 aa11.25□□□□□ -0.61
CPD1YGR247W SNU66Q12420 587 aaPredicted RBP11.25□□□□□ -0.61
CPD1YGR247W SPR3P41901 512 aa11.24□□□□□ -0.61
CPD1YGR247W YLR225CQ05948 407 aaKnown RBP11.24□□□□□ -0.61
CPD1YGR247W YDL144CQ07589 356 aa11.24□□□□□ -0.61
CPD1YGR247W UBP12P39538 1254 aa11.23□□□□□ -0.61
CPD1YGR247W AAD16Q02895 342 aa11.23□□□□□ -0.61
CPD1YGR247W GIN4Q12263 1142 aa11.23□□□□□ -0.61
CPD1YGR247W YGR122WP53272 402 aa11.22□□□□□ -0.61
CPD1YGR247W ADR1P07248 1323 aa11.21□□□□□ -0.61
CPD1YGR247W MAL31P38156 614 aa11.21□□□□□ -0.61
CPD1YGR247W PUS6P53294 404 aa11.21□□□□□ -0.61
CPD1YGR247W NOP8Q08287 484 aaPredicted RBP11.21□□□□□ -0.61
CPD1YGR247W PFK2P16862 959 aaKnown RBP RIP-Chip data11.2□□□□□ -0.62not detected
CPD1YGR247W TPS3P38426 1054 aaKnown RBP11.2□□□□□ -0.62
CPD1YGR247W YFH7P43591 353 aa11.2□□□□□ -0.62
CPD1YGR247W SWC3P31376 625 aa11.19□□□□□ -0.62
CPD1YGR247W HXT10P43581 546 aa11.19□□□□□ -0.62
CPD1YGR247W PEX29Q03370 554 aa11.19□□□□□ -0.62
CPD1YGR247W PPM2Q08282 695 aa11.19□□□□□ -0.62
CPD1YGR247W DUR1,2P32528 1835 aaKnown RBP11.19□□□□□ -0.62
CPD1YGR247W RAD24P32641 659 aa11.17□□□□□ -0.62
CPD1YGR247W KEL1P38853 1164 aaKnown RBP11.17□□□□□ -0.62
CPD1YGR247W RAD53P22216 821 aa11.16□□□□□ -0.62
CPD1YGR247W PAH1P32567 862 aa11.16□□□□□ -0.62
CPD1YGR247W RPT3P33298 428 aaKnown RBP11.16□□□□□ -0.62
CPD1YGR247W APL6P46682 809 aa11.15□□□□□ -0.62
CPD1YGR247W PMA1P05030 918 aaKnown RBP11.13□□□□□ -0.63
CPD1YGR247W ERG7P38604 731 aa11.13□□□□□ -0.63
CPD1YGR247W BOI2P39969 1040 aa11.13□□□□□ -0.63
CPD1YGR247W PSF2P40359 213 aa11.13□□□□□ -0.63
CPD1YGR247W YPP1P46951 817 aa11.13□□□□□ -0.63
CPD1YGR247W NET1P47035 1189 aa11.13□□□□□ -0.63
CPD1YGR247W ULP1Q02724 621 aa11.13□□□□□ -0.63
CPD1YGR247W FBP1P09201 348 aa11.12□□□□□ -0.63
CPD1YGR247W ADP1P25371 1049 aa11.12□□□□□ -0.63
CPD1YGR247W SNF3P10870 884 aa11.1□□□□□ -0.63
CPD1YGR247W OCT1P35999 772 aa11.1□□□□□ -0.63
CPD1YGR247W GLO3P38682 493 aaKnown RBP11.1□□□□□ -0.63
CPD1YGR247W IXR1P33417 597 aa11.09□□□□□ -0.63
CPD1YGR247W PTK1P36002 662 aaPredicted RBP11.09□□□□□ -0.63
CPD1YGR247W SEC18P18759 758 aaKnown RBP11.08□□□□□ -0.64
CPD1YGR247W YIR042CP40586 236 aa11.08□□□□□ -0.64
CPD1YGR247W ATG1P53104 897 aa11.08□□□□□ -0.64
CPD1YGR247W MDL2P33311 773 aa11.07□□□□□ -0.64
CPD1YGR247W CSI1Q04368 295 aa11.07□□□□□ -0.64
CPD1YGR247W INM2Q05533 292 aa11.07□□□□□ -0.64
CPD1YGR247W TY3A-GQ12173 290 aa11.07□□□□□ -0.64
CPD1YGR247W GYP5Q12344 894 aa11.07□□□□□ -0.64
CPD1YGR247W TY3A-IQ99219 290 aa11.07□□□□□ -0.64
CPD1YGR247W FLO1P32768 1537 aa11.06□□□□□ -0.64
CPD1YGR247W SUI2P20459 304 aaKnown RBP11.06□□□□□ -0.64
CPD1YGR247W ACA1P39970 489 aa11.06□□□□□ -0.64
CPD1YGR247W NOP2P40991 618 aaKnown RBP11.06□□□□□ -0.64
CPD1YGR247W CLA4P48562 842 aa11.06□□□□□ -0.64
CPD1YGR247W CFT2Q12102 859 aaPredicted RBP11.06□□□□□ -0.64
CPD1YGR247W CDC60P26637 1090 aaKnown RBP11.05□□□□□ -0.64
CPD1YGR247W MCD4P36051 919 aa11.05□□□□□ -0.64
CPD1YGR247W YBL028CP38202 106 aa11.05□□□□□ -0.64
CPD1YGR247W VPS62P53285 467 aa11.05□□□□□ -0.64
CPD1YGR247W PCL8Q08966 492 aa11.05□□□□□ -0.64
CPD1YGR247W MAK21Q12176 1025 aaKnown RBP11.05□□□□□ -0.64
CPD1YGR247W RRI2Q12348 645 aa11.05□□□□□ -0.64
CPD1YGR247W RPP0P05317 312 aaKnown RBP11.04□□□□□ -0.64
CPD1YGR247W PIF1P07271 859 aa11.04□□□□□ -0.64
CPD1YGR247W RPS19AP07280 144 aaKnown RBP11.04□□□□□ -0.64
CPD1YGR247W RPS19BP07281 144 aaPredicted RBP11.04□□□□□ -0.64
CPD1YGR247W YDJ1P25491 409 aaKnown RBP11.04□□□□□ -0.64
CPD1YGR247W LDH1P38139 375 aa11.04□□□□□ -0.64
CPD1YGR247W VAB2P40003 282 aa11.04□□□□□ -0.64
CPD1YGR247W LYS14P40971 790 aa11.04□□□□□ -0.64
CPD1YGR247W YVH1Q02256 364 aaKnown RBP11.04□□□□□ -0.64
CPD1YGR247W HAL5P38970 855 aaKnown RBP11.03□□□□□ -0.64
CPD1YGR247W SLA1P32790 1244 aa11.02□□□□□ -0.65
CPD1YGR247W MSH4P40965 878 aaPredicted RBP11.02□□□□□ -0.65
CPD1YGR247W TUB2P02557 457 aaKnown RBP11.01□□□□□ -0.65
CPD1YGR247W KIN1P13185 1064 aa11.01□□□□□ -0.65
CPD1YGR247W SPT21P35209 758 aa11.01□□□□□ -0.65
CPD1YGR247W SSF1P38789 453 aaPredicted RBP11.01□□□□□ -0.65
CPD1YGR247W NSG2P53898 299 aa11.01□□□□□ -0.65
CPD1YGR247W SNU71P53207 620 aaKnown RBP11□□□□□ -0.65
CPD1YGR247W YNL193WP53870 558 aa11□□□□□ -0.65
CPD1YGR247W ARP8Q12386 881 aaKnown RBP RIP-Chip data11□□□□□ -0.65not detected
CPD1YGR247W TAO3P40468 2376 aa10.99□□□□□ -0.65
CPD1YGR247W AI2P03876 854 aa10.99□□□□□ -0.65
CPD1YGR247W PIP2P52960 996 aa10.99□□□□□ -0.65
CPD1YGR247W EAR1Q03212 550 aa10.99□□□□□ -0.65
CPD1YGR247W CYB2P00175 591 aa10.98□□□□□ -0.65
CPD1YGR247W SRS2P12954 1174 aa10.98□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms