RNA–Protein interactions for RNA: YFR003C

YPI1, Transcript of Regulatory subunit of the type I protein phosphatase (PP1) Glc7p, yeast

Gene YPI1, Length 468 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPI1	YFR003C	TYW1	Q08960	810 aa	Known RBP	11.47	□□□□□ -0.57
YPI1	YFR003C	PSF3	Q12146	194 aa		11.47	□□□□□ -0.57
YPI1	YFR003C	IRC4	Q03036	179 aa		11.46	□□□□□ -0.57
YPI1	YFR003C	CSI1	Q04368	295 aa		11.46	□□□□□ -0.57
YPI1	YFR003C	JJJ2	P46997	583 aa		11.45	□□□□□ -0.58
YPI1	YFR003C	YRB30	P53107	440 aa	Predicted RBP	11.44	□□□□□ -0.58
YPI1	YFR003C	LCB1	P25045	558 aa	Known RBP	11.43	□□□□□ -0.58
YPI1	YFR003C	ACK1	Q07622	623 aa	Predicted RBP	11.43	□□□□□ -0.58
YPI1	YFR003C	POM152	P39685	1337 aa		11.42	□□□□□ -0.58
YPI1	YFR003C	ARG82	P07250	355 aa		11.42	□□□□□ -0.58
YPI1	YFR003C	CBP1	P07252	654 aa		11.42	□□□□□ -0.58
YPI1	YFR003C	RPS19A	P07280	144 aa	Known RBP	11.42	□□□□□ -0.58
YPI1	YFR003C	RPS19B	P07281	144 aa	Predicted RBP	11.42	□□□□□ -0.58
YPI1	YFR003C	HXT10	P43581	546 aa		11.42	□□□□□ -0.58
YPI1	YFR003C	TOS4	Q06266	489 aa		11.42	□□□□□ -0.58
YPI1	YFR003C	RVB2	Q12464	471 aa	Known RBP	11.42	□□□□□ -0.58
YPI1	YFR003C	RPS7A	P26786	190 aa	Known RBP	11.41	□□□□□ -0.58
YPI1	YFR003C	BSD2	P38356	321 aa		11.41	□□□□□ -0.58
YPI1	YFR003C	RRT6	P53117	311 aa	Predicted RBP	11.41	□□□□□ -0.58
YPI1	YFR003C	WRS1	Q12109	432 aa	Known RBP	11.41	□□□□□ -0.58
YPI1	YFR003C	TFC8	Q12308	588 aa		11.41	□□□□□ -0.58
YPI1	YFR003C	FLO11	P08640	1367 aa		11.41	□□□□□ -0.58
YPI1	YFR003C	ADR1	P07248	1323 aa		11.4	□□□□□ -0.58
YPI1	YFR003C	MAP2	P38174	421 aa	Known RBP	11.4	□□□□□ -0.58
YPI1	YFR003C	TIF6	Q12522	245 aa	Known RBP	11.4	□□□□□ -0.58
YPI1	YFR003C	HO	P09932	586 aa		11.39	□□□□□ -0.59
YPI1	YFR003C	DAL5	P15365	543 aa		11.38	□□□□□ -0.59
YPI1	YFR003C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.38	□□□□□ -0.59	not detected
YPI1	YFR003C	SSF1	P38789	453 aa	Predicted RBP	11.37	□□□□□ -0.59
YPI1	YFR003C	YFH7	P43591	353 aa		11.37	□□□□□ -0.59
YPI1	YFR003C	CSR2	Q12734	1121 aa		11.37	□□□□□ -0.59
YPI1	YFR003C	GYP5	Q12344	894 aa		11.36	□□□□□ -0.59
YPI1	YFR003C	RRI2	Q12348	645 aa		11.36	□□□□□ -0.59
YPI1	YFR003C	SRF1	Q12516	437 aa		11.36	□□□□□ -0.59
YPI1	YFR003C	RAD2	P07276	1031 aa		11.35	□□□□□ -0.59
YPI1	YFR003C	HVG1	P0CE11	249 aa		11.35	□□□□□ -0.59
YPI1	YFR003C	GAL2	P13181	574 aa		11.35	□□□□□ -0.59
YPI1	YFR003C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.35	□□□□□ -0.59	not detected
YPI1	YFR003C	PNT1	P38969	423 aa		11.35	□□□□□ -0.59
YPI1	YFR003C	NIT1	P40447	199 aa		11.35	□□□□□ -0.59
YPI1	YFR003C	YIL092W	P40497	633 aa		11.35	□□□□□ -0.59
YPI1	YFR003C	PUS6	P53294	404 aa		11.35	□□□□□ -0.59
YPI1	YFR003C	SEC18	P18759	758 aa	Known RBP	11.34	□□□□□ -0.59
YPI1	YFR003C	TFA1	P36100	482 aa		11.34	□□□□□ -0.59
YPI1	YFR003C	YNG2	P38806	282 aa	Known RBP	11.34	□□□□□ -0.59
YPI1	YFR003C	UTP7	P40055	554 aa	Known RBP	11.34	□□□□□ -0.59
YPI1	YFR003C	HGH1	P48362	394 aa	Known RBP	11.34	□□□□□ -0.59
YPI1	YFR003C	MTC3	P53077	123 aa		11.34	□□□□□ -0.59
YPI1	YFR003C	RPT3	P33298	428 aa	Known RBP	11.33	□□□□□ -0.6
YPI1	YFR003C	CST9	Q06032	482 aa		11.33	□□□□□ -0.6
YPI1	YFR003C	DUR1,2	P32528	1835 aa	Known RBP	11.32	□□□□□ -0.6
YPI1	YFR003C	TOM1	Q03280	3268 aa		11.32	□□□□□ -0.6
YPI1	YFR003C	SLA1	P32790	1244 aa		11.32	□□□□□ -0.6
YPI1	YFR003C	RSC30	P38781	883 aa		11.32	□□□□□ -0.6
YPI1	YFR003C	PIF1	P07271	859 aa		11.31	□□□□□ -0.6
YPI1	YFR003C	APL6	P46682	809 aa		11.31	□□□□□ -0.6
YPI1	YFR003C	YJL171C	P46992	396 aa		11.31	□□□□□ -0.6
YPI1	YFR003C	SPO1	P53541	631 aa		11.3	□□□□□ -0.6
YPI1	YFR003C	NCB2	Q92317	146 aa		11.3	□□□□□ -0.6
YPI1	YFR003C	MDL2	P33311	773 aa		11.29	□□□□□ -0.6
YPI1	YFR003C	PTK1	P36002	662 aa	Predicted RBP	11.29	□□□□□ -0.6
YPI1	YFR003C	GLO3	P38682	493 aa	Known RBP	11.29	□□□□□ -0.6
YPI1	YFR003C	YIR042C	P40586	236 aa		11.29	□□□□□ -0.6
YPI1	YFR003C	INM2	Q05533	292 aa		11.29	□□□□□ -0.6
YPI1	YFR003C	GCD7	P32502	381 aa	Predicted RBP	11.28	□□□□□ -0.6
YPI1	YFR003C	APE3	P37302	537 aa	Known RBP	11.28	□□□□□ -0.6
YPI1	YFR003C	YNL193W	P53870	558 aa		11.28	□□□□□ -0.6
YPI1	YFR003C	RIM101	P33400	625 aa		11.27	□□□□□ -0.61
YPI1	YFR003C	TPS3	P38426	1054 aa	Known RBP	11.27	□□□□□ -0.61
YPI1	YFR003C	RBA50	Q04418	439 aa		11.27	□□□□□ -0.61
YPI1	YFR003C	GSC2	P40989	1895 aa		11.26	□□□□□ -0.61
YPI1	YFR003C	AI2	P03876	854 aa		11.26	□□□□□ -0.61
YPI1	YFR003C	NCS6	P53088	359 aa		11.26	□□□□□ -0.61
YPI1	YFR003C	GIN4	Q12263	1142 aa		11.26	□□□□□ -0.61
YPI1	YFR003C	HAL5	P38970	855 aa	Known RBP	11.25	□□□□□ -0.61
YPI1	YFR003C	RPN7	Q06103	429 aa	Known RBP	11.25	□□□□□ -0.61
YPI1	YFR003C	SNF3	P10870	884 aa		11.24	□□□□□ -0.61
YPI1	YFR003C	RAD53	P22216	821 aa		11.24	□□□□□ -0.61
YPI1	YFR003C	MOT2	P34909	587 aa	Known RBP	11.24	□□□□□ -0.61
YPI1	YFR003C	JIP4	Q03361	876 aa		11.24	□□□□□ -0.61
YPI1	YFR003C	PMA1	P05030	918 aa	Known RBP	11.23	□□□□□ -0.61
YPI1	YFR003C	ADP1	P25371	1049 aa		11.23	□□□□□ -0.61
YPI1	YFR003C	BOI1	P38041	980 aa	Known RBP	11.23	□□□□□ -0.61
YPI1	YFR003C	CYB2	P00175	591 aa		11.22	□□□□□ -0.61
YPI1	YFR003C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.22	□□□□□ -0.61	not detected
YPI1	YFR003C	SDH2	P21801	266 aa		11.22	□□□□□ -0.61
YPI1	YFR003C	KEL1	P38853	1164 aa	Known RBP	11.22	□□□□□ -0.61
YPI1	YFR003C	PIP2	P52960	996 aa		11.22	□□□□□ -0.61
YPI1	YFR003C	NOP2	P40991	618 aa	Known RBP	11.21	□□□□□ -0.61
YPI1	YFR003C	PUF6	Q04373	656 aa	Known RBP	11.21	□□□□□ -0.61
YPI1	YFR003C	PRS1	P32895	427 aa	Known RBP	11.2	□□□□□ -0.62
YPI1	YFR003C	PEX29	Q03370	554 aa		11.2	□□□□□ -0.62
YPI1	YFR003C	PCL8	Q08966	492 aa		11.2	□□□□□ -0.62
YPI1	YFR003C	YGL242C	P53066	181 aa		11.19	□□□□□ -0.62
YPI1	YFR003C	PPM2	Q08282	695 aa		11.19	□□□□□ -0.62
YPI1	YFR003C	ASH1	P34233	588 aa		11.18	□□□□□ -0.62
YPI1	YFR003C	YBL028C	P38202	106 aa		11.18	□□□□□ -0.62
YPI1	YFR003C	NMD2	P38798	1089 aa	Known RBP	11.18	□□□□□ -0.62
YPI1	YFR003C	ILV3	P39522	585 aa	Known RBP	11.18	□□□□□ -0.62
YPI1	YFR003C	MSH4	P40965	878 aa	Predicted RBP	11.18	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 43 ms